BAC Information

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BAC

Clone NameB6Ng01-018N13
Chromosome2 (Build37)
Map Location 41,042,494 - 41,043,495
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC666531
Downstream geneLOC100042629, LOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018N13.bB6Ng01-018N13.g
ACCDH852126DH852127
length3241,001
definitionDH852126|Mus musculus domesticus DNA, BAC clone: B6Ng01-018N13, 5' end.DH852127|Mus musculus domesticus DNA, BAC clone: B6Ng01-018N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttatgcagtaaagaacagtattattctaacagagcagcagtctataga
atgtgtagattctgagagagaaggagtagtttcttcagttttgtaacctc
tgctgagttccccaggttccagtggacaattccaactaatatgcccatag
ccttagctaatttggtgggtcacactacataaagaacagacataaattag
acagaaagatttatgggtagggagaaaagatggtgggtggtagagaagtg
gaagctgaaaagtttcattcttcatgctatacatgtaaaatgtttaaaag
tgaataaataaaaataaaatagac

gaattcacattaaggaaacatagttcaatgatatcaaggtttttattgac
ttggttacaattactttcagaaaaatcaattccagaaaatagtatggcac
ttaactgcacatactgacatttaatggttagaaatatttgaactatcact
aaaaaaaaaaaaaaatcttattttattcccttccttctttccttctttgc
ttccttcctttcttccaccctccctccctcctccctctctctcaacctcc
ctcccttccttcccccctccctcccttccttcctttctttccttttttct
ttgttactttcttcctttctttttttgttattgggatgaacatgttacag
ccttggtatagaggacagcagagagagtctgggagtgaatgctttccatg
tggatccaggcagggaattgaattcagtcagatcttcagccttagtaata
gcaagtgcctttacttactgagttgtcttgccaccctaaatgtttgtaat
tttaaaaactaatttgacacacacacacacaaacccctcaattccaactt
actacttgcttctacactcaactcaaatttgttaatgttggagtaagcag
ccatggttgtttaggtgggatatttgcacaatttgaaatcagtcctgttc
atttcttccagctatttagacaaaacaccactgatatctggagcttcaga
tttgcatattcgagggactagaacacttctgggagagaactatgtaccac
cttaaagattctatgcactctttttattccatattctatagatatgttat
ttcacaaaatactgcttttttggtttttttttagctatattgtacagcca
ataataagaattcagttttgggactggaaagatggctcagtggttaacag
gacgggctgcccttccagggatcttgagtgcaattcccagcaaccacgtg
gtggctcacgacttctataatggtgatctgctgccttcttgagcagcagt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41042494_41043495
seq2: B6Ng01-018N13.g_67_1067 (reverse)

seq1  AACTGCTTGCCTCAAGAGGGCAGCAGATCA-CATTATAGATAGTCGTGAG  49
      |||||||   ||||||| |||||||||||| ||||||||| |||||||||
seq2  AACTGCT--GCTCAAGAAGGCAGCAGATCACCATTATAGA-AGTCGTGAG  47

seq1  CCACCACGTGGTTGCTGGGAATTGCACTCAAGATCCCTGGAAGGGCAGCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACGTGGTTGCTGGGAATTGCACTCAAGATCCCTGGAAGGGCAGCC  97

seq1  CGTCCTGTTAACCACTGAGCCATCTTTCCAGTCCCAAAACTGAATTCTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTGTTAACCACTGAGCCATCTTTCCAGTCCCAAAACTGAATTCTTA  147

seq1  TTATTGGCTGTACAATATAGCTAAAAAAAAACC-AAAAAGCAGTATTTTG  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATTGGCTGTACAATATAGCTAAAAAAAAACCAAAAAAGCAGTATTTTG  197

seq1  TGAAATAACATATCTATAGAATATGGAATAAAAAGAGTGCATAGAATCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAACATATCTATAGAATATGGAATAAAAAGAGTGCATAGAATCTT  247

seq1  TAAGGTGGTACATAGTTCTCTCCCAGAAGTGTTCTAGTCCCTCGAATATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGTACATAGTTCTCTCCCAGAAGTGTTCTAGTCCCTCGAATATG  297

seq1  CAAATCTGAAGCTCCAGATATCAGTGGTGTTTTGTCTAAATAGCTGGAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTGAAGCTCCAGATATCAGTGGTGTTTTGTCTAAATAGCTGGAAG  347

seq1  AAATGAACAGGACTGATTTCAAATTGTGCAAATATCCCACCTAAACAACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACAGGACTGATTTCAAATTGTGCAAATATCCCACCTAAACAACC  397

seq1  ATGGCTGCTTACTCCAACATTAACAAATTTGAGTTGAGTGTAGAAGCAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGCTTACTCCAACATTAACAAATTTGAGTTGAGTGTAGAAGCAAG  447

seq1  TAGTAAGTTGGAATTGAGGGGTTTGTGTGTGTGTGTGTCAAATTAGTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGTTGGAATTGAGGGGTTTGTGTGTGTGTGTGTCAAATTAGTTTT  497

seq1  TAAAATTACAAACATTTAGGGTGGCAAGACAACTCAGTAAGTAAAGGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTACAAACATTTAGGGTGGCAAGACAACTCAGTAAGTAAAGGCAC  547

seq1  TTGCTATTACTAAGGCTGAAGATCTGACTGAATTCAATTCCCTGCCTGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTACTAAGGCTGAAGATCTGACTGAATTCAATTCCCTGCCTGGA  597

seq1  TCCACATGGAAAGCATTCACTCCCAGACTCTCTCTGCTGTCCTCTATACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGGAAAGCATTCACTCCCAGACTCTCTCTGCTGTCCTCTATACC  647

seq1  AAGGCTGTAACATGTTCATCCCAATAACAAAAAAAGAAAGGAAGAAAGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGTAACATGTTCATCCCAATAACAAAAAAAGAAAGGAAGAAAGTA  697

seq1  ACAAAGAAAAAAGGAAAGAAAGGAAGGAAGGGAGGGAGGGGGGAAGGAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAAAAAGGAAAGAAAGGAAGGAAGGGAGGGAGGGGGGAAGGAAG  747

seq1  GGAGGGAGGTTGAGAGAGAGGGAGGAGGGAGGGAGGGTGGAAGAAAGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGTTGAGAGAGAGGGAGGAGGGAGGGAGGGTGGAAGAAAGGAA  797

seq1  GGAAGCAAAGAAGGAAAGAAGGAAGGGAATAAAATAAGATTTTTTTTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAAAGAAGGAAAGAAGGAAGGGAATAAAATAAGATTTTTTTTTTT  847

seq1  TTTTAGTGATAGTTCAAATATTTCTAACCATTAAATGTCAGTATGTGCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGATAGTTCAAATATTTCTAACCATTAAATGTCAGTATGTGCAG  897

seq1  TTAAGTGCCATACTATTTTCTGGAATTGATTTTTCTGAAAGTAATTGTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGCCATACTATTTTCTGGAATTGATTTTTCTGAAAGTAATTGTAA  947

seq1  CCAAGTCAATAAAAACCTTGATATCATTGAACTATGTTTCCTTAATGTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCAATAAAAACCTTGATATCATTGAACTATGTTTCCTTAATGTGA  997

seq1  ATTC  1002
      ||||
seq2  ATTC  1001


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