BAC Information

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BAC

Clone NameB6Ng01-019B16
Chromosome2 (Build37)
Map Location 138,057,578 - 138,117,171
singlet/doubletdoublet
Overlap geneBtbd3
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019B16.bB6Ng01-019B16.g
ACCDH852294DH852295
length1,208991
definitionDH852294|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B16, 5' end.DH852295|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,115,951 - 138,117,171)(138,057,578 - 138,058,575)
sequence
gaattcctcaacaatacagcccattgtagctttacaaactaggtggctac
tgagtgggaggatttaaaacggcagcaccaaggctttgtccaactctcta
cattgacaactcgctaaaggaatgtgtaaattgaaagtgcatatgcacac
atgaggaacacttatggtttactctgtgacttttcatctctggttttgct
gagcacttataggtgtattttctgttcaacaagcattgccacaggagtgt
tgggatattgtcatcgcctatctcttctaggaagggattatcgccatttt
cctggaaatatgaggtttagaggcagagcaacttgcttcaggtaccatgc
agatttagtcaaagtctaaatgtggatgacaatccagtttcaggttgagc
cactagctgctatatcacctctacattttatttcagtttctttaaagaat
ggaaggggagaatctcaaagggtttctctaagacaactacttagttaatg
caaaactccctaagaataaatgtaaggcaagaggtttctccatcttcatt
aagttgctttataacggttatttcaaaactcagccataccctggggatct
ctctatgctttcaaatattcatccttttaaccatttcctagctgttttag
tcttcacttacattattctttcaacccaacattctcctggcctccagcct
gatccagtctctcctgcccagagatctgtgcctaaaagaaaagcttgtcc
tatctattctcaatcctcttcggtatcattaccttattttgactaaaaag
ccagataaatgagtcttacccatagaatgcttgcttcctgctcctgctag
gtcaatgtcctattccaaacccagcacacaggctgtggctttattctaca
tggaccctttactgttggcacactgggatgtctcagtatttttgttgtgg
gatttcttctgtaatagtccacactacaattgactatttatgctagcaat
cattttctcttccaggcagaagtaatgctaatccatgttaatgatttgct
agagttcagctcctctcagctctgctgcttcgtactcaataagcctttgg
ggtcagcgaatacttggtgctatctgcaacagcaagcagtagccatggga
gggagcccgttggatatgtcacttggacaacattggactgactcgactct
gagggaac
gaattcaatgaggactgggaaatggccttgggactcagtgtcaaagggtt
tgctgggtaccttggcaagagtggattttatgagaacagtagagtaaaaa
ctttaataggggctatctaagagagaattggaagtgaggtctgtagcatc
gtacctgtgagcacctcctcgtcagttcttgtccgagaggtgttaaggaa
tattattattattgttattattattattattattattattattattatta
tttccacaactgtgattcattgcactagaaagatacaaaattgaattagc
cacatgatcagatgcagaggaagagctgtagagtaaaccagctgaattct
tttaagactttttttttttggttttcacacaatacttgttcaatctgcca
gaagagactgtgagaaatcctgccaagtagccacgttcacaacagcatta
gaacccaggatttttttccctggggggcagctatataggcagcatcagac
tggtgtgcaccatgtaggtaacatctgactgatgtgcagaaaagttccgg
cttccaagggtgaacagtttagactcacagtgccactcccacttagtgat
gactctctggtttcccttccttgtgagaagaccttcaagtcagacctgct
atgccacctctgggctgcaaaaccggaggaggtcagcaagcaaagatcgt
gtccttcactaaggtagctgtaaaggggagaagagaaatccgatgacagg
tggaggaaacatagtgtgttatttttagtagaagtgagattacagggtgt
gtgaatgcttataggaatagcacagcgaggagagaaaaatatattcatgt
aagacagtgggaaacctaagaggaagagaagggtggaactcattgcagag
cagaaacaaaacctgaatttgagtatgttctattaacaagagttcttgat
agaatcgttatatttaaggagaaaaatcattgcttcctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138115951_138117171
seq2: B6Ng01-019B16.b_43_1250 (reverse)

seq1  GTTCCCTCAGAAGTTCTGATGTCAGTCCAAAATGGTGTCCAAGTGACTAT  50
      |||||||||| |||   || ||||||||  |||| |||||||||||| ||
seq2  GTTCCCTCAG-AGT--CGA-GTCAGTCC--AATGTTGTCCAAGTGAC-AT  43

seq1  ATCCAACAGGCTTCCTCCCAATGCTACTGC-TGCTGTCTGCAGATAGCAC  99
      ||||||| |||| |||||||  |||||||| |||||| ||||||||||||
seq2  ATCCAACGGGCTCCCTCCCATGGCTACTGCTTGCTGT-TGCAGATAGCAC  92

seq1  CAAGTA-TCGCTGACCCACAAAGGGCTATGTGAGTACGAAGCAGCAGAGC  148
      |||||| |||||||||| ||||||  ||| ||||||||||||||||||||
seq2  CAAGTATTCGCTGACCC-CAAAGGCTTAT-TGAGTACGAAGCAGCAGAGC  140

seq1  TGAGAGGAAGGCTGGAACTCCTAGCAAATCATTAACATGGATTAGCATTA  198
      ||||||||  ||| ||||| ||||||||||||||||||||||||||||||
seq2  TGAGAGGA--GCT-GAACT-CTAGCAAATCATTAACATGGATTAGCATTA  186

seq1  CCTTCTGCCTGGAAGAGAAAATGATTGCTAGCATAAATAGTCAATTGTAG  248
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTTCTGCCTGGAAGAGAAAATGATTGCTAGCATAAATAGTCAATTGTAG  235

seq1  TGTGGACTATTACAGAAGAAATCCCACAACAAAAATACTGAGACATCCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACTATTACAGAAGAAATCCCACAACAAAAATACTGAGACATCCCA  285

seq1  GTGTGCCAACAGTAAAGGGTCCATGTAGAATAAAGCCACAGCCTGTGTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCAACAGTAAAGGGTCCATGTAGAATAAAGCCACAGCCTGTGTGC  335

seq1  TGGGTTTGGAATAGGACATTGACCTAGCAGGAGCAGGAAGCAAGCATTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGGAATAGGACATTGACCTAGCAGGAGCAGGAAGCAAGCATTCT  385

seq1  ATGGGTAAGACTCATTTATCTGGCTTTTTAGTCAAAATAAGGTAATGATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAAGACTCATTTATCTGGCTTTTTAGTCAAAATAAGGTAATGATA  435

seq1  CCGAAGAGGATTGAGAATAGATAGGACAAGCTTTTCTTTTAGGCACAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGAGGATTGAGAATAGATAGGACAAGCTTTTCTTTTAGGCACAGAT  485

seq1  CTCTGGGCAGGAGAGACTGGATCAGGCTGGAGGCCAGGAGAATGTTGGGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCAGGAGAGACTGGATCAGGCTGGAGGCCAGGAGAATGTTGGGT  535

seq1  TGAAAGAATAATGTAAGTGAAGACTAAAACAGCTAGGAAATGGTTAAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAATAATGTAAGTGAAGACTAAAACAGCTAGGAAATGGTTAAAAG  585

seq1  GATGAATATTTGAAAGCATAGAGAGATCCCCAGGGTATGGCTGAGTTTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATATTTGAAAGCATAGAGAGATCCCCAGGGTATGGCTGAGTTTTG  635

seq1  AAATAACCGTTATAAAGCAACTTAATGAAGATGGAGAAACCTCTTGCCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCGTTATAAAGCAACTTAATGAAGATGGAGAAACCTCTTGCCTT  685

seq1  ACATTTATTCTTAGGGAGTTTTGCATTAACTAAGTAGTTGTCTTAGAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTCTTAGGGAGTTTTGCATTAACTAAGTAGTTGTCTTAGAGAA  735

seq1  ACCCTTTGAGATTCTCCCCTTCCATTCTTTAAAGAAACTGAAATAAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGAGATTCTCCCCTTCCATTCTTTAAAGAAACTGAAATAAAATG  785

seq1  TAGAGGTGATATAGCAGCTAGTGGCTCAACCTGAAACTGGATTGTCATCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGATATAGCAGCTAGTGGCTCAACCTGAAACTGGATTGTCATCC  835

seq1  ACATTTAGACTTTGACTAAATCTGCATGGTACCTGAAGCAAGTTGCTCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGACTTTGACTAAATCTGCATGGTACCTGAAGCAAGTTGCTCTG  885

seq1  CCTCTAAACCTCATATTTCCAGGAAAATGGCGATAATCCCTTCCTAGAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAACCTCATATTTCCAGGAAAATGGCGATAATCCCTTCCTAGAAG  935

seq1  AGATAGGCGATGACAATATCCCAACACTCCTGTGGCAATGCTTGTTGAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGCGATGACAATATCCCAACACTCCTGTGGCAATGCTTGTTGAAC  985

seq1  AGAAAATACACCTATAAGTGCTCAGCAAAACCAGAGATGAAAAGTCACAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATACACCTATAAGTGCTCAGCAAAACCAGAGATGAAAAGTCACAG  1035

seq1  AGTAAACCATAAGTGTTCCTCATGTGTGCATATGCACTTTCAATTTACAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACCATAAGTGTTCCTCATGTGTGCATATGCACTTTCAATTTACAC  1085

seq1  ATTCCTTTAGCGAGTTGTCAATGTAGAGAGTTGGACAAAGCCTTGGTGCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTAGCGAGTTGTCAATGTAGAGAGTTGGACAAAGCCTTGGTGCT  1135

seq1  GCCGTTTTAAATCCTCCCACTCAGTAGCCACCTAGTTTGTAAAGCTACAA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTTTAAATCCTCCCACTCAGTAGCCACCTAGTTTGTAAAGCTACAA  1185

seq1  TGGGCTGTATTGTTGAGGAATTC  1221
      |||||||||||||||||||||||
seq2  TGGGCTGTATTGTTGAGGAATTC  1208

seq1: chr2_138057578_138058575
seq2: B6Ng01-019B16.g_64_1054

seq1  GAATTCAATGAGGACTGGGAAATGGCCTTGGGACTCAGTGTCAAAGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAGGACTGGGAAATGGCCTTGGGACTCAGTGTCAAAGGGTT  50

seq1  TGCTGGGTACCTTGGCAAGAGTGGATTTTATGAGAACAGTAGAGTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTACCTTGGCAAGAGTGGATTTTATGAGAACAGTAGAGTAAAAA  100

seq1  CTTTAATAGGGGCTATCTAAGAGAGAATTGGAAGTGAGGTCTGTAGCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATAGGGGCTATCTAAGAGAGAATTGGAAGTGAGGTCTGTAGCATC  150

seq1  GTACCTGTGAGCACCTCCTCGTCAGTTCTTGTCCGAGAGGTGTTAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTGAGCACCTCCTCGTCAGTTCTTGTCCGAGAGGTGTTAAGGAA  200

seq1  TATTATTATTATTGTTATTATTATTATTATTATTATTATTATTATTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTGTTATTATTATTATTATTATTATTATTATTATTATTA  250

seq1  TTTCCACAACTGTGATTCATTGCACTAGAAAGATACAAAATTGAATTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAACTGTGATTCATTGCACTAGAAAGATACAAAATTGAATTAGC  300

seq1  CACATGATCAGATGCAGAGGAAGAGCTGTAGAGTAAACCAGCTGAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATCAGATGCAGAGGAAGAGCTGTAGAGTAAACCAGCTGAATTCT  350

seq1  TTTAAGACTTTTTTTTTTTGGTTTTCACACAATACTTGTTCAATCTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACTTTTTTTTTTTGGTTTTCACACAATACTTGTTCAATCTGCCA  400

seq1  GAAGAGACTGTGAGAAATCCTGCCAAGTAGCCACGTTCACAACAGCATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACTGTGAGAAATCCTGCCAAGTAGCCACGTTCACAACAGCATTA  450

seq1  GAACCCAGGATTTTTTTCCCTGGGGGGCAGCTATATAGGCAGCATCAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGGATTTTTTTCCCTGGGGGGCAGCTATATAGGCAGCATCAGAC  500

seq1  TGGTGTGCACCATGTAGGTAACATCTGACTGATGTGCAGAAAAGTTCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCACCATGTAGGTAACATCTGACTGATGTGCAGAAAAGTTCCGG  550

seq1  CTTCCAAGGGTGAACAGTTTAGACTCACAGTGCCACTCCCACTTAGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGGGTGAACAGTTTAGACTCACAGTGCCACTCCCACTTAGTGAT  600

seq1  GACTCTCTGGTTTCCCTTCCTTGTGAGAAGACCTTCAAGTCAGACCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCTGGTTTCCCTTCCTTGTGAGAAGACCTTCAAGTCAGACCTGCT  650

seq1  ATGCCACCTCTGGGCTGCAAAACCGGAGGAGGTCAGCAAGCAAAGATCGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACCTCTGGGCTGCAAAACCGGAGGAGGTCAGCAAGCAAAGATCGT  700

seq1  GTCCTTCACTAAGGTAGCTGTAAAGGGGAGAAGAGAAATCCGATGACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCACTAAGGTAGCTGTAAAGGGGAGAAGAGAAATCCGATGACAGG  750

seq1  TGGAGGAAACATAGTGTGTTATTTTTAGTAGAAGTGAGATTACAGGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAACATAGTGTGTTATTTTTAGTAGAAGTGAGATTACAGGGTGT  800

seq1  GTGAATGCTTATAGGAATAGCACAGCGAGGAGAGAAAAATATAGTCATGT  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGAATGCTTATAGGAATAGCACAGCGAGGAGAGAAAAATATATTCATGT  850

seq1  AAGACAGTGGGAAACTTAAGAGGAAGAGAAGGGTGGAACTCAATGCAGAG  900
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  AAGACAGTGGGAAACCTAAGAGGAAGAGAAGGGTGGAACTCATTGCAGAG  900

seq1  CAGAAACAAAAACCTGAAATTGAGTATGTTCTATTAACAAGAGTTCTATG  950
      ||||||| |||||||||| |||||||||||||||||||||||||||| ||
seq2  CAGAAAC-AAAACCTGAATTTGAGTATGTTCTATTAACAAGAGTTCT-TG  948

seq1  ATTAGAATCGATATTATTAAATGTAGAAAAATCAATAGCTTCCCTATT  998
      | |||||||| |||  ||||  | ||||||||| || |||| ||||||
seq2  A-TAGAATCGTTATATTTAA--GGAGAAAAATC-ATTGCTT-CCTATT  991