BAC Information

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BAC

Clone NameB6Ng01-019E13
Chromosome2 (Build37)
Map Location 98,320,089 - 98,321,036
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc4c, LOC621146, LOC664974
Downstream geneLOC100042886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019E13.bB6Ng01-019E13.g
ACCDH852424DH852425
length1,118943
definitionDH852424|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E13, 5' end.DH852425|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggattacctaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactcgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattccttaccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaacccaag
aaaaaatgaagactgaagtgtggacactatgcccctcctagaagtgagaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgtgacaccattgcatacactaccagattttatcgaaagg
acccagattagctgtctcttgtgagactatgccgggcctagaaacacaga
gtggatgccacagtcagctatggatggatcacagggctcccaatggagga
gctagagaagtacccaggagctaaagggatctgcaccctataggtggatc
tacattatgactaccagacccggacttttgctctagctgcattgatcaaa
gacgcctagtcggcatcttggaagaggtgcccttgggaatctaacttttt
atgccctataacgggacg
gaattcctgacacattttctggctgcaccatctttctttgaatctattaa
aaatgtagacaaatagaaaaggaaaaagtcaaataaaatatatttaaaat
gtataaaataaaagataactgagattctttacccattattttcagatctc
aacctaagcaccctggaagctccaaagtaccaagtacagtgtcacacaac
aagctggaccaggatgagacatttgcaagctttgcagatgcgtattattc
catttattgaaagaagttttaggagaggagataggagaaacccttaccat
caggaagaaaggcagacacataatttagcatagaaagtagcaaacaataa
gtcattacaataaaatatttagtatgttgagaggaattattattaaaaat
aatactttgataaaattgtacttaaagcatgaaggagaaatgtatcctca
tagaaaatgagatgatattttgataataggactatttgtcttttataata
aaactttgctggagagaaatataataatatgttagagatttggatctaga
gctaaaggccctggcattcaagcttggtgtatgagtttgttccctagagt
ccacgtgaaagaggaaggaaggagctgattgaacaattacacacacacac
acatactcacacacacacacacacacacacacacacatacacacacacac
acacacacacacacacacacacacacactaacacacacatgtatatatat
atatgcaagaaaagaggtacaaatcaataaaactgctgatatatcgctct
atctatgtgggtagaaataggcccagtgcaacagtgattagtgaaatttt
cacatgaatcaaaaaggacacggttgagttaacataagcacattcatggg
ctgggaagaatgtagtgaaatcagttcttgtaacatgtattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_98320089_98321036
seq2: B6Ng01-019E13.g_73_1015 (reverse)

seq1  ATAATACATGTTTACAGGACTTATTTTCAACTACATTTCTCCCAGCCCAT  50
      ||||||||||||   || ||| ||||   ||||||||  |||||||||||
seq2  ATAATACATGTTACAAGAACTGATTT--CACTACATTCTTCCCAGCCCAT  48

seq1  GACTGTGCTTATGTTAAACTAAACCGTGTCTTTTTTGATTCATTGTGAAA  100
      || |||||||||||| |||| ||||||||| ||||||||||| |||||||
seq2  GAATGTGCTTATGTT-AACTCAACCGTGTCCTTTTTGATTCA-TGTGAAA  96

seq1  ATTTCACTTATCACTGTTGCACTGGGCCTATTTCTACCCAAATAGATTAG  150
      |||||||| ||||||||||||||||||||||||||||||| ||||| |||
seq2  ATTTCACTAATCACTGTTGCACTGGGCCTATTTCTACCCACATAGA-TAG  145

seq1  AGCGATATAATCAGCAGTTTTATTGATTTGTACCTCTTTTCTTGCATATA  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATAT-ATCAGCAGTTTTATTGATTTGTACCTCTTTTCTTGCATATA  194

seq1  TATATATATGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  250
      ||||||||  |||||||||| |||||||||||||||||||||||||||||
seq2  TATATATACATGTGTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  244

seq1  TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTATGTG  294

seq1  TGTGTGTGTGTAATTGTTCAATCAGCTCCTTCCTTCCTCTTTCACGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTAATTGTTCAATCAGCTCCTTCCTTCCTCTTTCACGTGGA  344

seq1  CTCTAGGGAACAAACTCATACACCAAGCTTGAATGCCAGGGCCTTTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGAACAAACTCATACACCAAGCTTGAATGCCAGGGCCTTTAGCT  394

seq1  CTAGATCCAAATCTCTAACATATTATTATATTTCTCTCCAGCAAAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCCAAATCTCTAACATATTATTATATTTCTCTCCAGCAAAGTTTT  444

seq1  ATTATAAAAGACAAATAGTCCTATTATCAAAATATCATCTCATTTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAAGACAAATAGTCCTATTATCAAAATATCATCTCATTTTCTAT  494

seq1  GAGGATACATTTCTCCTTCATGCTTTAAGTACAATTTTATCAAAGTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACATTTCTCCTTCATGCTTTAAGTACAATTTTATCAAAGTATTA  544

seq1  TTTTTAATAATAATTCCTCTCAACATACTAAATATTTTATTGTAATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATAATAATTCCTCTCAACATACTAAATATTTTATTGTAATGACT  594

seq1  TATTGTTTGCTACTTTCTATGCTAAATTATGTGTCTGCCTTTCTTCCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTGCTACTTTCTATGCTAAATTATGTGTCTGCCTTTCTTCCTGA  644

seq1  TGGTAAGGGTTTCTCCTATCTCCTCTCCTAAAACTTCTTTCAATAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGGTTTCTCCTATCTCCTCTCCTAAAACTTCTTTCAATAAATGG  694

seq1  AATAATACGCATCTGCAAAGCTTGCAAATGTCTCATCCTGGTCCAGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATACGCATCTGCAAAGCTTGCAAATGTCTCATCCTGGTCCAGCTTG  744

seq1  TTGTGTGACACTGTACTTGGTACTTTGGAGCTTCCAGGGTGCTTAGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGACACTGTACTTGGTACTTTGGAGCTTCCAGGGTGCTTAGGTTG  794

seq1  AGATCTGAAAATAATGGGTAAAGAATCTCAGTTATCTTTTATTTTATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGAAAATAATGGGTAAAGAATCTCAGTTATCTTTTATTTTATACA  844

seq1  TTTTAAATATATTTTATTTGACTTTTTCCTTTTCTATTTGTCTACATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATATATTTTATTTGACTTTTTCCTTTTCTATTTGTCTACATTTT  894

seq1  TAATAGATTCAAAGAAAGATGGTGCAGCCAG-ACATGTGTCAGGAATTC  948
      ||||||||||||||||||||||||||||||| | |||||||||||||||
seq2  TAATAGATTCAAAGAAAGATGGTGCAGCCAGAAAATGTGTCAGGAATTC  943