BAC Information

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BAC

Clone NameB6Ng01-019F20
Chromosome2 (Build37)
Map Location 81,307,929 - 81,309,028
singlet/doubletsinglet
Overlap genenone
Upstream geneNckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneLOC100040704, Zfp804a, LOC100041308, A130030D18Rik, EG624362
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019F20.bB6Ng01-019F20.g
ACCDH852473DH852474
length1,0761,256
definitionDH852473|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F20, 5' end.DH852474|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaacatggtcacttctcctgttaaaaaatatcatgatccatgac
taataacaccttttctaatagagacagttgatacatctcatatcaggaac
tcacttggggacatatgaatcccagttcagtgacatcctctgacactaat
ggaatggttgatggtcaacaaccttcttacaaatggtttgatcagtggcc
aatacaatccttttggtattgccagtatgcacatctcattcccagacaaa
aacaaacacctcccacttttttcaatctaaaggaaagcctaaaactaaaa
gctgaaaagaagtatgctatatctcagggccagatttttaaaaatgggat
gaatagccatccctatactgaatctgtcctgatacatgccaaaagtgtcc
tccttgaaaataggatagcttccatgtgaaaaaagcatcaccataagaca
tgaagtacaggcatttgcctgcacaattatgctgctaagcttgaaatatt
tctaaattcttttttttttttgtggtccttggtgacaggttttaaacatt
ttttaaaatttttaatatttttattacatattttgctcaattacatttcc
aatgctatcccaaaagtcccccataccttcccccccaattccctacccac
ccattcccatttttttggccctggagttcccctgtactggggcatataaa
gtttgtgtgtccaatgggcctctctttccagtgatggccgactaggccat
cttttgatacatatgcagctagagtcaaatgaagattttcaacttaaagg
gccagccaatatcttcaacaaaattatagaagaaaacttcccaaacctaa
agaaagagatgccaatgaaatatttctaaattcttactcaaagaatataa
ctcctcttcatgcccttctaatgctttctaaccacattgactaatcttaa
gcctgcctgctatacatttagagcatctactgtctttttttcccccattt
tattagtattagctcatttacatttcatgcatacaaagtcccgaaccacc
cccgccactccctaccacctctccac
gaattcaacacaccactttcataaatgcacagatcgtggaaacagaaact
aaacagggacacagtgaaactaacaaaagttatgaaagaaatggatttaa
cagatatgtatagaacattttattctaaaacaaaaggatataccttcttc
tcagcaacttttggtacattcttcaaaactaatcatataattggtcacaa
aacaggcctcaccagatacaaaagtattgaaattatcccatgcatcctat
cagatcatcatgaactaaggctgatcttcaatatcaatataaataacaga
aagccaacattcacgtggaaactgaacaacacttttcacaatgatacctc
ggtcaaggaaggaataaggaaagaaattaaagactttttagagcttaata
aaatgaagccacaacatacccaaacttatgggacacaatgaaagcatttc
taagaggaaaactcatagctctgagtgcctccaaaaagaaagtagagaga
gcatacactagcagcttgacaacaaacctaaaatcactagaacaaaagga
agcaaattcacacaagaggatggcaggaaataatcaactcggggcaaaat
caaccaagtggaaacaagaagaactattcaaagaatcaaccaaatgagga
ggtggttctttgagaaaatgcacaagagagataaacccttagccatactc
actagagggcacagggacagcatcctaattaactaagtcagaaatgaaaa
gggagacataacaacagatcctgaagaaacccaaaacaccatcagatcct
tctacaaaagactatattcaacaaaactggaaaacctggatgaaatggac
acatttctagacagataccaggtaccaaagttaatttaggaccaggttaa
tgatctaaatggtcctataacccctaaagaaatagaagcagtcattaata
tctcccaaccaaaaaagccaaggactagatgggtttagtgcagagtctat
cagaccttcaagaaaatcgaattccagttctacaaaatagcagcagaggt
actctacctatgcagtatatgaagcccattacactgatacctaaccacag
aaagacccaccatgatgacactcgaccaatttccctttagtgaattgatg
caaatattcaataaatcttgccagcgaatcagacatgagtatctctctac
tgacaatatggcctctctcagaatctcagcatgttttaatatgcggaaga
ttcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81307929_81309028
seq2: B6Ng01-019F20.b_44_1119 (reverse)

seq1  GTGGAGAGGGTGGGTAGGGGAGTGTGCGGGGGTGGGTATGGGGGACTTTT  50
      |||||||||   |||| ||||||| ||||||||||   |  |||||||| 
seq2  GTGGAGAGG--TGGTA-GGGAGTG-GCGGGGGTGG---TTCGGGACTTT-  42

seq1  GGTATAGCATTGGAAATGTAAATGAGCTAAATAACTAATAAAAATGGGGG  100
       |||| ||||  ||||||||||||||||||   |||||| ||||||||||
seq2  -GTAT-GCAT--GAAATGTAAATGAGCTAA--TACTAAT-AAAATGGGGG  85

seq1  AAAAAAAGACAGTAAGAATGCTCTAAATGTTATTAGCAGGCAGGCTTAAG  150
      ||||||||||||||   |||||||||||||   |||||||||||||||||
seq2  AAAAAAAGACAGTA--GATGCTCTAAATGT--ATAGCAGGCAGGCTTAAG  131

seq1  ATTTAAGTCAATGTGGTTAGAAAGCATTTAGAAGGGCATTGAAGAGGAGT  200
      |||  ||||||||||||||||||||| ||||||||||| |||||||||||
seq2  ATT--AGTCAATGTGGTTAGAAAGCA-TTAGAAGGGCA-TGAAGAGGAGT  177

seq1  TATATTCTTTTGAGTAAGAATTTAGAAATATTTCATTGGCATCTCTTTCT  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTC-TTTGAGTAAGAATTTAGAAATATTTCATTGGCATCTCTTTCT  226

seq1  TTAGGTTTGGGAAGTTTTCTTCTATAATTTTGTTGAAGATATTGGCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTGGGAAGTTTTCTTCTATAATTTTGTTGAAGATATTGGCTGGC  276

seq1  CCTTTAAGTTGAAAATCTTCATTTGACTCTAGCTGCATATGTATCAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAGTTGAAAATCTTCATTTGACTCTAGCTGCATATGTATCAAAAG  326

seq1  ATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAAC  376

seq1  TTTATATGCCCCAGTACAGGGGAACTCCAGGGCCAAAAAAATGGGAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCCCCAGTACAGGGGAACTCCAGGGCCAAAAAAATGGGAATGG  426

seq1  GTGGGTAGGGAATTGGGGGGGAAGGTATGGGGGACTTTTGGGATAGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGGAATTGGGGGGGAAGGTATGGGGGACTTTTGGGATAGCATT  476

seq1  GGAAATGTAATTGAGCAAAATATGTAATAAAAATATTAAAAATTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTAATTGAGCAAAATATGTAATAAAAATATTAAAAATTTTAAAA  526

seq1  AATGTTTAAAACCTGTCACCAAGGACCACAAAAAAAAAAAAGAATTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTAAAACCTGTCACCAAGGACCACAAAAAAAAAAAAGAATTTAGA  576

seq1  AATATTTCAAGCTTAGCAGCATAATTGTGCAGGCAAATGCCTGTACTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCAAGCTTAGCAGCATAATTGTGCAGGCAAATGCCTGTACTTCA  626

seq1  TGTCTTATGGTGATGCTTTTTTCACATGGAAGCTATCCTATTTTCAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATGGTGATGCTTTTTTCACATGGAAGCTATCCTATTTTCAAGGA  676

seq1  GGACACTTTTGGCATGTATCAGGACAGATTCAGTATAGGGATGGCTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTTTTGGCATGTATCAGGACAGATTCAGTATAGGGATGGCTATTC  726

seq1  ATCCCATTTTTAAAAATCTGGCCCTGAGATATAGCATACTTCTTTTCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTTTTAAAAATCTGGCCCTGAGATATAGCATACTTCTTTTCAGC  776

seq1  TTTTAGTTTTAGGCTTTCCTTTAGATTGAAAAAAGTGGGAGGTGTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTAGGCTTTCCTTTAGATTGAAAAAAGTGGGAGGTGTTTGTT  826

seq1  TTTGTCTGGGAATGAGATGTGCATACTGGCAATACCAAAAGGATTGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGGGAATGAGATGTGCATACTGGCAATACCAAAAGGATTGTATT  876

seq1  GGCCACTGATCAAACCATTTGTAAGAAGGTTGTTGACCATCAACCATTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGATCAAACCATTTGTAAGAAGGTTGTTGACCATCAACCATTCC  926

seq1  ATTAGTGTCAGAGGATGTCACTGAACTGGGATTCATATGTCCCCAAGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGTCAGAGGATGTCACTGAACTGGGATTCATATGTCCCCAAGTGA  976

seq1  GTTCCTGATATGAGATGTATCAACTGTCTCTATTAGAAAAGGTGTTATTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGATATGAGATGTATCAACTGTCTCTATTAGAAAAGGTGTTATTA  1026

seq1  GTCATGGATCATGATATTTTTTAACAGGAGAAGTGACCATGTTGGAATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGATCATGATATTTTTTAACAGGAGAAGTGACCATGTTGGAATTC  1076