BAC Information

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BAC

Clone NameB6Ng01-020D21
Chromosome2 (Build37)
Map Location 104,372,274 - 104,373,311
singlet/doubletsinglet
Overlap genenone
Upstream geneAbtb2, Nat10, Caprin1, LOC433458, LOC100042961, LOC100042965, Lmo2, Fbxo3, Cd59b, Cd59a, A930018P22Rik, D430041D05Rik, LOC100043349, Hipk3
Downstream geneLOC383735, LOC668733, Cstf3, Tcp11l1, EG622282, OTTMUSG00000014964, Depdc7, Qser1, LOC100042995, 2310047K21Rik, LOC668744, Prrg4, Ccdc73, Ga17, 2210415I11Rik, LOC622356, Wt1, 0610012H03Rik, Rcn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020D21.bB6Ng01-020D21.g
ACCDH853097DH853098
length1,0341,153
definitionDH853097|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D21, 5' end.DH853098|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggctagccaggaacacacatggagaccttgtctccagaaata
atcattcattcattcattcattcattcattcatttctctaaactgtcagt
ctaaggctagagtatagatcattgccaagggcatatgtttgagccccaaa
accataaatgtagaacaaacaacacattagtctgattggcacagcctgtc
agaggtagagttaggactgatagttctttgcagcactgtcattcagctgg
ggtgtagctcggtgataaaatatgtgtttagcgtgcataagatcctaagt
tggtgtgggaagccaaggaagcattgagagaatgtgtaaaggacagacgg
attcgggaatgaatgggtcgtgtttgacacaggcatggccatgcctagaa
cccagtgcttcagactgtgggcatggcaagccttgagtcagtggggacgg
gagagatggcaaagccttcctctggtcagagtttgaatatccacagtgtg
tacaaacacaagtgtttatggacagttgactagggtatgcaaaaactacc
aactgccacttcctcatcctggatgtttacagcagaaactgtcaacctgc
agagacctcctactgagacaggccaaccctgtgctgttcacaaagccaac
aagctggggttgttgcagtagtgggtgtggcttcaaagggcctgcactga
tcacccaaccccagcttctctgttcttttttcattctcttagcagcccta
gtcatgttaagaccagtctgagccccagtaccataaacaaagaccaaaaa
atagtcagttatttcaagttagagccttgctctttagaggtatatctttt
ctgtgtcagtacacaagtttataaaataacatttccaactatctccttgc
tcctacactgctttcttgctgccttttcagaaatacccactgtgagcagc
ttagtgtgtgtctttatagttcattctgtctacatatatatatacaccat
atatatatttgtgtgtgtgtgtgttgtgtggtgc
gaattctgagaccctaaccagactgtaacctgacattggggcactgtatc
aatgtactgtaagtaatgctccctgataatcccctgttggttggggcttg
tgactgggcagaatggaggtcaggactgagagttgagtatgagctcttga
gagagaagccggaggtaagagtcaccattacatgggatggaccataagaa
gcctgtggccaagagaagtgagtcctgaggaagggctggtggagcagaag
cagcctgagacacaccaggttggcaggtgattggcatttgtgtgggtttt
acaagtggaagggttagaatagctcaatgtgcccagcataatgcctacaa
cttattaataaagtataatgtttttgtgttgtttacttgagaatgcatgg
gcaagaagtgaggtagaaactaccaatagatgctacggagtaaaaggggg
tgtaataatactccagaaaatgatagcatttaataaatggttgttacatc
agctactgtatccacaaaatctagttcaatgtcattcacttgcaacttta
attttggcctctgattattaactgtttgccagacacatttttcagtactt
ccaaatgctcctgatctttttactggattggccttgcctttgatttaagg
aaacattaacaggtgaacactcctatcacctgtgttaaattgcatttttc
tttttacataagccattcttttaatttctcctttgaaatatacagtgaat
ccttgggaggtcaactgcttctgaataccatttctactgtccttgagggc
aatgaccacacactccagtagctactttataacattgaattttggggata
gtgtgagatgtttatctccggccagctttaaagcaacactgtctgcagta
tcatgcatagatttgcagtactagtgaggttttctgcctgctgttatctt
tggctgaatagaggcaaacagatctacttttgctgcaggccttgacctag
gcctcctccattttgtttccaatggcaaaagtccctctgtatctctcctc
tgccatatccaattgttcaggcaaccttgccgttaccctgccacctcctg
ggaatctagctttccttgctcttagaaaccgtggccttagaaagcctggt
tag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_104372274_104373311
seq2: B6Ng01-020D21.b_42_1075

seq1  GAATTCCAGGCTAGCCAGGAACACACATGGAGACCTTGTCTCCAGAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTAGCCAGGAACACACATGGAGACCTTGTCTCCAGAAATA  50

seq1  ATCATTCATTCATTCATTCATTCATTCATTCATTTCTCTAAACTGTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCATTCATTCATTCATTCATTCATTCATTTCTCTAAACTGTCAGT  100

seq1  CTAAGGCTAGAGTATAGATCATTGCCAAGGGCATATGTTTGAGCCCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCTAGAGTATAGATCATTGCCAAGGGCATATGTTTGAGCCCCAAA  150

seq1  ACCATAAATGTAGAACAAACAACACATTAGTCTGATTGGCACAGCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAAATGTAGAACAAACAACACATTAGTCTGATTGGCACAGCCTGTC  200

seq1  AGAGGTAGAGTTAGGACTGATAGTTCTTTGCAGCACTGTCATTCAGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGAGTTAGGACTGATAGTTCTTTGCAGCACTGTCATTCAGCTGG  250

seq1  GGTGTAGCTCGGTGATAAAATATGTGTTTAGCGTGCATAAGATCCTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGCTCGGTGATAAAATATGTGTTTAGCGTGCATAAGATCCTAAGT  300

seq1  TGGTGTGGGAAGCCAAGGAAGCATTGAGAGAATGTGTAAAGGACAGACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGGAAGCCAAGGAAGCATTGAGAGAATGTGTAAAGGACAGACGG  350

seq1  ATTCGGGAATGAATGGGTCGTGTTTGACACAGGCATGGCCATGCCTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGGAATGAATGGGTCGTGTTTGACACAGGCATGGCCATGCCTAGAA  400

seq1  CCCAGTGCTTCAGACTGTGGGCATGGCAAGCCTTGAGTCAGTGGGGACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGCTTCAGACTGTGGGCATGGCAAGCCTTGAGTCAGTGGGGACGG  450

seq1  GAGAGATGGCAAAGCCTTCCTCTGGTCAGAGTTTGAATATCCACAGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGCAAAGCCTTCCTCTGGTCAGAGTTTGAATATCCACAGTGTG  500

seq1  TACAAACACAAGTGTTTATGGACAGTTGACTAGGGTATGCAAAAACTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACACAAGTGTTTATGGACAGTTGACTAGGGTATGCAAAAACTACC  550

seq1  AACTGCCACTTCCTCATCCTGGATGTTTACAGCAGAAACTGTCAACCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCACTTCCTCATCCTGGATGTTTACAGCAGAAACTGTCAACCTGC  600

seq1  AGAGACCTCCTACTGAGACAGGCCAACCCTGTGCTGTTCACAAAGCCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCTCCTACTGAGACAGGCCAACCCTGTGCTGTTCACAAAGCCAAC  650

seq1  AAGCTGGGGTTGTTGCAGTAGTGGGTGTGGCTTCAAAGGGCCTGCACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGGTTGTTGCAGTAGTGGGTGTGGCTTCAAAGGGCCTGCACTGA  700

seq1  TCACCCAACCCCAGCTTCTCTGTTCTTTTTTCATTCTCTTAGCAGCCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAACCCCAGCTTCTCTGTTCTTTTTTCATTCTCTTAGCAGCCCTA  750

seq1  GTCATGTTAAGACCAGTCTGAGCCCCAGTACCATAAACAAAGACCAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTAAGACCAGTCTGAGCCCCAGTACCATAAACAAAGACCAAAAA  800

seq1  ATAGTCAGTTATTTCAAGTTAGAGCCTTGCTCTTTAGAGGTATATCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAGTTATTTCAAGTTAGAGCCTTGCTCTTTAGAGGTATATCTTTT  850

seq1  CTGTGTCAGTACACAAGTTTATAAAATAACATTTCCAACTATCTCCTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCAGTACACAAGTTTATAAAATAACATTTCCAACTATCTCCTTGC  900

seq1  TCCTACACTGCTTTCTTGCTGCCTTTTCAGAAATACCCACTGTGAGCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACACTGCTTTCTTGCTGCCTTTTCAGAAATACCCACTGTGAGCAGC  950

seq1  TTAGTGTGTGTCTTTATAGTTCATTCTGTCTAACATATATATATACACAC  1000
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  TTAGTGTGTGTCTTTATAGTTCATTCTGTCT-ACATATATATATACAC-C  998

seq1  ATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGC  1038
      |||||||||| ||||||||||||||| |||||| ||||
seq2  ATATATATATTTGTGTGTGTGTGTGT-TGTGTG-GTGC  1034