BAC Information

Click to search

BAC

Clone NameB6Ng01-020D24
Chromosome2 (Build37)
Map Location 96,759,727 - 96,760,649
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020D24.bB6Ng01-020D24.g
ACCDH853103DH853104
length1,293923
definitionDH853103|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D24, 5' end.DH853104|Mus musculus domesticus DNA, BAC clone: B6Ng01-020D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatggaagagaaaaaggagtatttgaggatttgaggtgaaaggg
ggttttaaaacagcacaagaaaaccaacagaatccactaacctgggccaa
ttgaggctgaactgccaaccagagagcatgcaagaggtggacttaggctc
tctgcacatatgtacagctttgcagctggatattcatgtgggattcctaa
aactggaactggaactggagctgtctctgactacactacctgcatttgga
ttcctttcttctaactgggcggctttctcttccctaaatagatgaagatg
tgcctagtcttattgcaacttgatataacagtactgtttgatatccatga
gaggcctcgcttttctgaagaatagaaataaggggtggagttgtgattga
caggggatgggaggtgaacaaaggggactgtgagaagaggagagagctga
agctgtgatagatatgttaagtaaataaataacattagttttaaaaatcc
acttctttgtagggaaatagagacataattctcagaataaaatacttgct
gatcaaacatgagtacttgagttatgatcctcataacacttatagaccca
gaaatggtagcacacatgcttgcaattccagcactcgtagagagaaatga
tacatagtgatagaatttctggaaggctagtccaatatatgcagtagaga
acaagaaaccttgtcttaaacaaggttgagagtgatgatgagcactcaag
atttttgtctgaattttacatatttaatacacacacacacacacacttca
cactctcacacatacacatgtatatacacattgaaacatatatacccgta
tactcatgtcacaaatttattaataaaattgggttgtatgtatcttactt
catatctcagtatattacttcatatactcatggtctgtaaactactttca
catcatataacaaacttcaatttcttagacactttaaaattagattttgt
taatttactaaactctcttcccatatctgataccattatttctaaactat
tccctaaaataaagacggaagaccctacttaactaattctttgaagcctt
tattactcttgatacctaatgatacaagaacccacccagaactctcgacc
atcttcctccaaatatttatgcgcatggccagataatctttcaactgaat
tccgaaaacaacaacccattgacccatgcctaagtggctctactagggat
caagtggtgttctaattatgcaaaaatctccattaccattata
gaattctatccttgagcagtctgacttcagtctgcttagatattaagcat
agttcataggtagctacataagtgtttcatgttagaatgtttctagtttt
tagttaacctcagagacattgtatacatttgtataaagatgaatgggaag
aatcttgtctttacttctggacccatgaaaaactttatctttcctttcag
atactctgtctagcctatgttcttccaagggaacttcacagatgtatcaa
ataatggatgatggtatttatctcagaactgcacataatgctcccttggc
acagcaggtctttggcttattgagagaatataaattagtacagcccactg
tttgccatctaagatgaaaaatagcctggagaggtgctcagcagttaaga
gaacttgttgctcttgcaaaagacccaggtttccatttccagcagctaca
tggtggcttacagtcatttgtaattctacttctaggagattcaatgctct
cttctggatgcttgggcaaccagcagatatgtggtgcaaatactgataaa
ccctcatttatagaaaattaaaataacatttacagttaaaataagattca
ttcattgtcctggaatgcattttagcaaataactgttaacactcagagtt
ttaaatgtattacactaaatatctgtaatattctagctgtgaaataattg
catcatttgcaaaagctgtcataatgtatagattaaatttttgtttatgg
tattggaatcaagagccattcactttgatagacacatatttcacaatatg
agtgaggttagtggattgtccctgtcaaaaagttacataaagatggtcca
ttcattttagtaaatcaaaattttactatttttcattacgtgtatgtata
ttattgtggggttggtgtatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96759727_96760649
seq2: B6Ng01-020D24.g_69_991

seq1  GAATTCTATCCTTGAGCAGTCTGACTTCAGTCTGCTTAGATATTAAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCTTGAGCAGTCTGACTTCAGTCTGCTTAGATATTAAGCAT  50

seq1  AGTTCATAGGTAGCTACATAAGTGTTTCATGTTAGAATGTTTCTAGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAGGTAGCTACATAAGTGTTTCATGTTAGAATGTTTCTAGTTTT  100

seq1  TAGTTAACCTCAGAGACATTGTATACATTTGTATAAAGATGAATGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAACCTCAGAGACATTGTATACATTTGTATAAAGATGAATGGGAAG  150

seq1  AATCTTGTCTTTACTTCTGGACCCATGAAAAACTTTATCTTTCCTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTCTTTACTTCTGGACCCATGAAAAACTTTATCTTTCCTTTCAG  200

seq1  ATACTCTGTCTAGCCTATGTTCTTCCAAGGGAACTTCACAGATGTATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGTCTAGCCTATGTTCTTCCAAGGGAACTTCACAGATGTATCAA  250

seq1  ATAATGGATGATGGTATTTATCTCAGAACTGCACATAATGCTCCCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGATGATGGTATTTATCTCAGAACTGCACATAATGCTCCCTTGGC  300

seq1  ACAGCAGGTCTTTGGCTTATTGAGAGAATATAAATTAGTACAGCCCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGTCTTTGGCTTATTGAGAGAATATAAATTAGTACAGCCCACTG  350

seq1  TTTGCCATCTAAGATGAAAAATAGCCTGGAGAGGTGCTCAGCAGTTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATCTAAGATGAAAAATAGCCTGGAGAGGTGCTCAGCAGTTAAGA  400

seq1  GAACTTGTTGCTCTTGCAAAAGACCCAGGTTTCCATTTCCAGCAGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTTGCTCTTGCAAAAGACCCAGGTTTCCATTTCCAGCAGCTACA  450

seq1  TGGTGGCTTACAGTCATTTGTAATTCTACTTCTAGGAGATTCAATGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTTACAGTCATTTGTAATTCTACTTCTAGGAGATTCAATGCTCT  500

seq1  CTTCTGGATGCTTGGGCAACCAGCAGATATGTGGTGCAAATACTGATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGATGCTTGGGCAACCAGCAGATATGTGGTGCAAATACTGATAAA  550

seq1  CCCTCATTTATAGAAAATTAAAATAACATTTACAGTTAAAATAAGATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATTTATAGAAAATTAAAATAACATTTACAGTTAAAATAAGATTCA  600

seq1  TTCATTGTCCTGGAATGCATTTTAGCAAATAACTGTTAACACTCAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTCCTGGAATGCATTTTAGCAAATAACTGTTAACACTCAGAGTT  650

seq1  TTAAATGTATTACACTAAATATCTGTAATATTCTAGCTGTGAAATAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTATTACACTAAATATCTGTAATATTCTAGCTGTGAAATAATTG  700

seq1  CATCATTTGCAAAAGCTGTCATAATGTATAGATTAAATTTTTGTTTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTGCAAAAGCTGTCATAATGTATAGATTAAATTTTTGTTTATGG  750

seq1  TATTGGAATCAAGAGCCATTCACTTTGATAGACACATATTTCACAATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAATCAAGAGCCATTCACTTTGATAGACACATATTTCACAATATG  800

seq1  AGTGAGGTTAGTGGATTGTCCCTGTCAAAAAGTTACATAAAGATGGTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTTAGTGGATTGTCCCTGTCAAAAAGTTACATAAAGATGGTCCA  850

seq1  TTCATTTTAGTAAAATCAAAATTTTACTATTTTTCATTACGTGTATGTAT  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTAGT-AAATCAAAATTTTACTATTTTTCATTACGTGTATGTAT  899

seq1  ATTATTGT-GGGTTGGTGTATGTG  923
      |||||||| ||||||||||||| |
seq2  ATTATTGTGGGGTTGGTGTATGAG  923