BAC Information

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BAC

Clone NameB6Ng01-020M20
Chromosome2 (Build37)
Map Location 142,938,623 - 142,939,680
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor
Downstream geneLOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020M20.bB6Ng01-020M20.g
ACCDH853494DH853495
length1,0471,147
definitionDH853494|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M20, 5' end.DH853495|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccctgtcaaattttcagatacaataaaaataccttcagttacc
tgaaaagcttggattttcttcatatatattggtgaaggcaactgaatggt
tgaagtgatggctcaggagtcaagagccctcattgctcttgcagagattc
agggtttggtcctcagcacctacagggcagtttaccgtcatccagaactt
cagctccagaggctcagatgtgcatttttgatctccacagctaccaggaa
tgtatgtaatgcaagcaaaacacccccacaaataaaaacaaagcaagcaa
acagaaatgctcccaaacacaataatgagacagattgaattgtggaatca
gatatgaaatctctctctctcctctctctccatatatatgcatatccatt
ctttcaatatgttaggtaatatatagttatatataatgatatatatgtat
atatgtacatatatgtgtatatatgtacacatatgtgtatatatgtacat
atatgtgtatatatgtacatatatgtgtatatatgtatatatgcatatat
atgcacataaaacctcaaggcatatattacactttttttaataattttac
aatttggagaacaatattcttatttaaattatttacatttatatgggatt
aattgttgttactctcctacataaacaaataagaactttttccaagttcc
taattacagtatcactgataatgttatatatatgctccatgcaaaggtac
ttggagggctggtgagatggctcagtgggttagagcacccgactgctctt
cccaaggtccggagttcaaatcccagcaaccacatggtggctcacaacca
tccattaaagagatctgactccctcttctggagtgtctgaagacagctac
agtgtacttacacatataaataaatgaatctaaaaaaataaaaaaaaaaa
ggtactttggagtctttaattttcatgttaaagaacaagtttggagaatt
gatgagagcctataatatgaatctacatcttacagcgatggcaccac

gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatattgtggattacattgatgg
atttttatatattgaaccatccctgcattcttgggatgaagcctacttga
tcatggtggatgatgtttttaatgtgttcctggatttggtctgtgagaat
tttattatttttgcaccaatgttcataagagaaattggtctgaaatttgc
tttctttgttgagtcttcatgtggtttaggtatcagggtgactgtggttt
cataggatgactctagcagtactccttattcttctcttttgtgaaatagt
gtgagtgtattcgtattagatcttctttgaaggtctggtagaattttgca
gtaaatccatctggccttgggattttaattttttttccttgcaagacttt
taaatgacttatatttctttaggggttatagggctatttaaatagtttat
ctgatctttatttaacttcggcaagtggtatctgtctagaaaatcattca
ttccattaagatttcaattttgtggagtacttttgaagtaatatctaatg
attctttgaatttccttgttgtatgatgttatgtgtcccttttcatttct
tgttttatttaatttgaaactgtctttctttctgtgggttagtttggcta
aggatttgtttatttaaaaaaaatcttgttgattttctcaaagatccagc
tcctgttttcaatgattctgtgttgttttctttgtttctaattgattgat
ttcagccctaattttgatttctactcctcttcagtggggtcgcttctttt
ttgtagaacttttcaggtatacctttaaattgcttgtagaagaaatttca
gttttttttagaggaactagtgtatgacttttttctttgtactgttttat
tggtgtccaaatttaggtatgttggtacttcattttcatggaattctgag
aagtctttaattctatattgggtggttcctttgcccatatcatgagatac
ccgttgtctgttccatataagaaggagttctcgatgttggtatgtccaaa
caaccttatatgcgatggaggcgtgcgatgtatagggatatttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142938623_142939680
seq2: B6Ng01-020M20.b_47_1093

seq1  GAATTCACCCTGTCAAATTTTCAGATACAATAAAAATACCTTCAGTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTGTCAAATTTTCAGATACAATAAAAATACCTTCAGTTACC  50

seq1  TGAAAAGCTTGGATTTTCTTCATATATATTGGTGAAGGCAACTGAATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCTTGGATTTTCTTCATATATATTGGTGAAGGCAACTGAATGGT  100

seq1  TGAAGTGATGGCTCAGGAGTCAAGAGCCCTCATTGCTCTTGCAGAGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGATGGCTCAGGAGTCAAGAGCCCTCATTGCTCTTGCAGAGATTC  150

seq1  AGGGTTTGGTCCTCAGCACCTACAGGGCAGTTTACCGTCATCCAGAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGGTCCTCAGCACCTACAGGGCAGTTTACCGTCATCCAGAACTT  200

seq1  CAGCTCCAGAGGCTCAGATGTGCATTTTTGATCTCCACAGCTACCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGAGGCTCAGATGTGCATTTTTGATCTCCACAGCTACCAGGAA  250

seq1  TGTATGTAATGCAAGCAAAACACCCCCACAAATAAAAACAAAGCAAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTAATGCAAGCAAAACACCCCCACAAATAAAAACAAAGCAAGCAA  300

seq1  ACAGAAATGCTCCCAAACACAATAATGAGACAGATTGAATTGTGGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATGCTCCCAAACACAATAATGAGACAGATTGAATTGTGGAATCA  350

seq1  GATATGAAATCTCTCTCTCTCCTCTCTCTCCATATATATGCATATCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAAATCTCTCTCTCTCCTCTCTCTCCATATATATGCATATCCATT  400

seq1  CTTTCAATATGTTAGGTAATATATAGTTATATATAATGATATATATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATATGTTAGGTAATATATAGTTATATATAATGATATATATGTAT  450

seq1  ATATGTACATATATGTGTATATATGTACACATATGTGTATATATGTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACATATATGTGTATATATGTACACATATGTGTATATATGTACAT  500

seq1  ATATGTGTATATATGTACATATATGTGTATATATGTATATATGCATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTATATATGTACATATATGTGTATATATGTATATATGCATATAT  550

seq1  ATGCACATAAAACCTCAAGGCATATATTACACTTTTTTTAATAATTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATAAAACCTCAAGGCATATATTACACTTTTTTTAATAATTTTAC  600

seq1  AATTTGGAGAACAATATTCTTATTTAAATTATTTACATTTATATGGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAGAACAATATTCTTATTTAAATTATTTACATTTATATGGGATT  650

seq1  AATTGTTGTTACTCTCCTACATAAACAAATAAGAACTTTTTCCAAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGTTACTCTCCTACATAAACAAATAAGAACTTTTTCCAAGTTCC  700

seq1  TAATTACAGTATCACTGATAATGTTATATATATGCTCCATGCAAAGGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGTATCACTGATAATGTTATATATATGCTCCATGCAAAGGTAC  750

seq1  TTGGAGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCTT  800

seq1  CCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCA  850
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCA  850

seq1  TCCATTAAGGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTAC  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAAAGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTAC  900

seq1  AGTGTACTTACACATAATAAATAAATGAATCTAAAAAAAAAAAAAAAAAA  950
      ||||||||||||||| ||||||||||||||||   ||||||| |||||||
seq2  AGTGTACTTACACAT-ATAAATAAATGAATCT---AAAAAAATAAAAAAA  946

seq1  AAAAGGTAC-TTGGAGTCCTCAATTTTTCAGTGTAAAAGAACAAAGTTTG  999
      ||||||||| |||||||| | || |||||| ||| ||||||| |||||||
seq2  AAAAGGTACTTTGGAGTCTTTAA-TTTTCA-TGTTAAAGAAC-AAGTTTG  993

seq1  GAGAATTGAATTGAGAGCTCATAATATGAAATCTACATCTTACCAGCAGA  1049
      |||||||||  |||||||  |||||||| ||||||||||||| |||| ||
seq2  GAGAATTGA--TGAGAGCCTATAATATG-AATCTACATCTTA-CAGC-GA  1038

seq1  TGGCACCAC  1058
      |||||||||
seq2  TGGCACCAC  1047


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