BAC Information

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BAC

Clone NameB6Ng01-021O22
Chromosome2 (Build37)
Map Location 110,898,548 - 110,899,253
singlet/doubletsinglet
Overlap geneLOC668802
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021O22.bB6Ng01-021O22.g
ACCDH854306DH854307
length1,110705
definitionDH854306|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O22, 5' end.DH854307|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaattttaatagttgaatagtacaccattgtgtaaatgaacc
atgttttctgtatccatttttctgttgtgggacatctgggtagtttctag
cttctggctatcacaattaaggaaactataaacatagtggaacatgtgcc
cctgtgacatggtagggtgtcttttggatatatgcccaagagtggtatag
ctgaatcttcaagtagatctatttccagttttctgaggaatcaccagatt
gatttttcagagtggttgtatcagtttgcaattcaatcagcaatggagaa
gtgttcctgtttctccacatcccagccagcatgtgctgtcaactgagttt
ttgattttagctattcagattggtgtaaggtggaatctcaaggttgtttt
aatttgcatttccttgagcactaaggactttggcaatttctttaagtgct
tctcatcccttcaagattcctctattatgaattttgtttagttttctacc
ccatttttcaattgtgcttttttggtttttctattggttagcttctttag
ttctttaaatattttggatattagccttctatcggatgtgggcttaggga
agatttttttcctaatctgtaggttgtcagtttgtcctatttgactgtcc
tttgccttacagaagctttccagtttcatgaagtcccatttatcaattct
ttatcttagagcctgagccattgaagttctgtctagaaaatttcccctgt
gccaatgagtctgatgctttttcccactttctcttctattagattcagtg
tatctggttttatgttgaggttcttgatccacttgtacttgagctttgtg
taaggtaacaaatatgcatctatttccatttttacatacagattgccagt
tataccagcatcacttatggaagatcctttcttttctctattgggtatct
tttcaagatcaagtgtcatatgggtgtggcttatttactgggtcttcatt
ctatccattgatgacctggctccggtaccacactgtttgtttttatcact
tgttgctccttcactaaagcctgaagcaggctggggtgaattatttttat
aaattggttc
gaattcactcaacattcacagacaagttaatagatttttacaaatatcat
ctttgaaaatatttgcctcatcctatgttatcctcttgttttaggttagt
atcattcaacatttggcactggagaataactcataaaaacttaaagggtg
aatgtaatacttgagttggtaatcaaacgaaccaaagaagtatatgacgc
atttacatcattacatcattaccaaagcagcaagggtggttaccaatcta
tcatttatacatattcacaattaataattttaaactattttgtggtctag
gttttcttttattcccatattaatgtttccctgtaccacaatatgtctgt
atggagagtatagagactaaggatattttgtgtgtccaggctccctctag
tggtcaaaaggtcactgcacataaaaagtcatttatcaactaccagatta
tgcctagggaagtaggggtatgtgtacccttggttttaagctatgttatg
taaaagccaatttaacattcagtatttgtatttgtgaaaatttttacaat
aagatttatgtcaatatccctgtcttaattacaaagtttcaaatatactc
agatgaaaatatatttgatttactatatgaaaataaaggagaagaggagg
gggaaaggggagggactctgtaagggagtacagggaggggaaatagttta
gatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110898548_110899253
seq2: B6Ng01-021O22.g_67_771

seq1  GAATTCACTCAACATTCACAGACAAGTTAATAGATTTTTACAAATATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAACATTCACAGACAAGTTAATAGATTTTTACAAATATCAT  50

seq1  CTTTGAAAATATTTGCCTCATCCTATGTTATCCTCTTGTTTTAGGTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAATATTTGCCTCATCCTATGTTATCCTCTTGTTTTAGGTTAGT  100

seq1  ATCATTCAACATTTGGCACTGGAGAATAACTCATAAAAACTTAAAGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAACATTTGGCACTGGAGAATAACTCATAAAAACTTAAAGGGTG  150

seq1  AATGTAATACTTGAGTTGGTAATCAAACGAACCAAAGAAGTATATGACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATACTTGAGTTGGTAATCAAACGAACCAAAGAAGTATATGACGC  200

seq1  ATTTACATCATTACATCATTACCAAAGCAGCAAGGGTGGTTACCAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCATTACATCATTACCAAAGCAGCAAGGGTGGTTACCAATCTA  250

seq1  TCATTTATACATATTCACAATTAATAATTTTAAACTATTTTGTGGTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATACATATTCACAATTAATAATTTTAAACTATTTTGTGGTCTAG  300

seq1  GTTTTCTTTTATTCCCATATTAATGTTTCCCTGTACCACAATATGTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTATTCCCATATTAATGTTTCCCTGTACCACAATATGTCTGT  350

seq1  ATGGAGAGTATAGAGACTAAGGATATTTTGTGTGTCCAGGCTCCCTCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGTATAGAGACTAAGGATATTTTGTGTGTCCAGGCTCCCTCTAG  400

seq1  TGGTCAAAAGGTCACTGCACATAAAAAGTCATTTATCAACTACCAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAAAGGTCACTGCACATAAAAAGTCATTTATCAACTACCAGATTA  450

seq1  TGCCTAGGGAAGTAGGGGTATGTGTACCCTTGGTTTTAAGCTATGTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGGAAGTAGGGGTATGTGTACCCTTGGTTTTAAGCTATGTTATG  500

seq1  TAAAAGCCAATTTAACATTCAGTATTTGTATTTGTGAAAATTTTTACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCAATTTAACATTCAGTATTTGTATTTGTGAAAATTTTTACAAT  550

seq1  AAGATTTATGTCAATATCCCTGTCTTAATTACAAAGTTTCAAATATACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTATGTCAATATCCCTGTCTTAATTACAAAGTTTCAAATATACTC  600

seq1  AGATGAAAATATATTTGATTTACTATATGAAAATAAAGGAGAAGAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAATATATTTGATTTACTATATGAAAATAAAGGAGAAGAGGAGG  650

seq1  GGGAAAGGGGAGGGACTCTGTAAGGGAGTACAGGGAGGGGAAATAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGAAAGGGGAGGGACTCTGTAAGGGAGTACAGGGAGGGGAAATAGTTT-  699

seq1  AGATAT  706
      ||||||
seq2  AGATAT  705