BAC Information

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BAC

Clone NameB6Ng01-022B21
Chromosome2 (Build37)
Map Location 26,257,383 - 26,257,995
singlet/doubletsinglet
Overlap geneInpp5e
Upstream geneNpdc1, Fut7, Abca2, Clic3, BC029214, Ptgds, EG665070, Lcn12, C8g, Fbxw5, Traf2, Edf1, Mamdc4, Phpt1, Gm996, LOC100039887, B230208H17Rik, 4921530D09Rik, Tmem141, Fcna, Lcn8, Lcn5, LOC620709, Lcn10, Lcn13, Bmyc, LOC383678, Lcn3, Lcn11, LOC620858, Glt6d1, Lcn9, Sohlh1, Kcnt1, Camsap1, LOC100040100, LOC665199, Ubadc1, Btbd14a, C330006A16Rik, Lhx3, Qscn6l1, C030048H21Rik, 4932418E24Rik, Gpsm1, D2Bwg1335e, Card9, Snapc4, Sdccag3, Pmpca
Downstream geneAU024582, Notch1, Egfl7, Agpat2, B230317C12Rik, 5730588L14Rik, LOC100039446, Lcn4, LOC669582, Abo, Surf6, Surf5-ps, Surf5, Rpl7a, Surf1, Surf2, Surf4, Gm711, Rexo4, Adamts13, 5930434B04Rik, Slc2a6, LOC665315, 1110002H13Rik, Adamtsl2, C630035N08Rik, Dbh, Sardh, Vav2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022B21.g
ACCDH854426
length614
definitionDH854426|Mus musculus domesticus DNA, BAC clone: B6Ng01-022B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagggagatgagggccatctgtgttgccatctgtgttggtatt
gtactctggctaaggaaatctcaactctaggggcaatactgatggctggt
atggacaggattgtcctcaggcccaaatggcttatagaactgataccttt
ggagagtgtggtcccaaaggtacctttcctgagtgaaggaactcctgggt
cactctggcatcactgaagctggctgctcacttgcctcttttttttttgt
aggagctatctggagggaagtcttctggccagtggggccctgctaggagc
agaagagctggccaggtacttcccagaccgaaacatggctctcttcgtgg
ctacctggaacatgcagggccagaaggtgagaggggtcacagtgaggtaa
ggcagaggcagctggactccatgtcctgactgatcacagcataatggctc
tgtgagtctccgtgagggatcggggttgggcatgcactgggaggatgggc
ataccccccaggcagcctgcgcagattgaagcgcctggtaagaaggggcg
cctgctgggaagtagcaactgagcagttgtgccttaagagggagacttaa
gtatctgtcatgtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_26257383_26257995
seq2: B6Ng01-022B21.g_68_680 (reverse)

seq1  ACATGACAGATACTTAAGTCTCCCTCTTAAGGCACAACTGCTCAGTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACAGATACTTAAGTCTCCCTCTTAAGGCACAACTGCTCAGTTGCT  50

seq1  ACTTCCCAGCAGGCGCCCCTTCTTACCAGGCGCTTCAATCTGCGCAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAGCAGGCGCCCCTTCTTACCAGGCGCTTCAATCTGCGCAGGCT  100

seq1  GCCTGGGGGGTATGCCCATCCTCCCAGTGCATGCCCAACCCCGATCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGGGGTATGCCCATCCTCCCAGTGCATGCCCAACCCCGATCCCTC  150

seq1  ACGGAGACTCACAGAGCCATTATGCTGTGATCAGTCAGGACATGGAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGACTCACAGAGCCATTATGCTGTGATCAGTCAGGACATGGAGTCC  200

seq1  AGCTGCCTCTGCCTTACCTCACTGTGACCCCTCTCACCTTCTGGCCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTCTGCCTTACCTCACTGTGACCCCTCTCACCTTCTGGCCCTGC  250

seq1  ATGTTCCAGGTAGCCACGAAGAGAGCCATGTTTCGGTCTGGGAAGTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCAGGTAGCCACGAAGAGAGCCATGTTTCGGTCTGGGAAGTACCT  300

seq1  GGCCAGCTCTTCTGCTCCTAGCAGGGCCCCACTGGCCAGAAGACTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTCTTCTGCTCCTAGCAGGGCCCCACTGGCCAGAAGACTTCCCT  350

seq1  CCAGATAGCTCCTACAAAAAAAAAAGAGGCAAGTGAGCAGCCAGCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAGCTCCTACAAAAAAAAAAGAGGCAAGTGAGCAGCCAGCTTCAG  400

seq1  TGATGCCAGAGTGACCCAGGAGTTCCTTCACTCAGGAAAGGTACCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCAGAGTGACCCAGGAGTTCCTTCACTCAGGAAAGGTACCTTTGG  450

seq1  GACCACACTCTCCAAAGGTATCAGTTCTATAAGCCATTTGGGCCTGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACACTCTCCAAAGGTATCAGTTCTATAAGCCATTTGGGCCTGAGGA  500

seq1  CAATCCTGTCCATACCAGCCATCAGTATTGCCCCTAGAGTTGAGATTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGTCCATACCAGCCATCAGTATTGCCCCTAGAGTTGAGATTTCC  550

seq1  TTAGCCAGAGTACAATACCAACACAGATGGCAACACAGATGGCCCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGAGTACAATACCAACACAGATGGCAACACAGATGGCCCTCATC  600

seq1  TCCCTCTGAATTC  613
      |||||||||||||
seq2  TCCCTCTGAATTC  613