BAC Information

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BAC

Clone NameB6Ng01-022J20
Chromosome2 (Build37)
Map Location 62,113,793 - 62,288,173
singlet/doubletdoublet
Overlap geneSlc4a10, Dpp4
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneGcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022J20.bB6Ng01-022J20.g
ACCDH854772DH854773
length9281,046
definitionDH854772|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J20, 5' end.DH854773|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,287,245 - 62,288,173)(62,113,793 - 62,114,846)
sequence
gaattcactttcggttctatattaacatgggaaccacctcagagtcatgc
aaacattagcttacactgtgcatactatctaagaacataaatagtcccct
ttatttctttttgttatccagctgtcaaataaacgttcaattctcataaa
cttgttttctatattaagccacctagtgactatatgagaaacataaacca
ttataaaaatgaaaatgaaaaatggaaataaaacctctatgtattcccca
aaggaatcatgtcaaataaggctttccttttttttttttccttttttttt
tcttttttctttttttttttttttttagttcacaagtgttttttttccac
cacttttgttttcctgaaccatgtctaaactaaaccaagtatggtcataa
agaaaggatattaaaatacatttctggttccctaagggaccattcttact
gctaaaatgttacaatgtaggaataaaaatgagttacacagaaatataaa
ttcctgaccagaaaaccccaaaccagggtttaagaaactataggaagatg
atctgcctacttagtgaatattctaagatattggcctcccaaagctagat
aagtagaaagttttaaaatatttttggaatattttgacaatcttcagctc
catgtaatcgcccagttatgtttgcaaaataaaacgcatgacttatcaac
tctttttttttttcttttcaacaacttgcaagatgagcaacactatagcc
attactcgggagaagtcctgacgttataccactgttccagggttcttctg
atattccacaaccgcccattttgtgacttaatcaaagggaagcttgtggt
aaatgtacattaaagtgagcaatgagcaggctaaagacaggtattcaagc
actgtatatcacattaagtggttgtatc
gaattctttgctcaaatatgaaccaaatagccacatgatataaagcagat
tttggtgagattgaaagactattcttagagagtttacaggctatgaagca
ctgacccaatttctctttgcttctgagctgacctaaatttaaggatgtat
tctgaagtatttaaaatgaaatttaatggtgtttcaatttacattaaaac
atcccagcatcagtattaagacaatgcattttctgcctcaaaaagctgat
attctgacctagaattcggctagcatcaaatcagagaagttatagtctag
aaatacctccataaactttctaaagttcctctgaatttttatttttctat
aatttatggttactcaaatttttgaagcagatatttgctttacaaataag
ttagtggtttatgcttaccaatatccaacaaggcactgtggagtagagct
cattttctgatgtaatgctttttctaattgatgttgtgatcgctctgtag
cattcaaatttatctttcctattggaaacattgccttggcatatatatat
atacacacacacactattgatgctgtgaatgtgatttgatacttttaatc
aaggtatctgccaatcctgttgtgaagtgttcacaaattattttggttta
tggactatgcaatgcactgctcattcgcttgtcatggctctgctgggtgc
tatagggggtcacagctatttactttgcagcattagtcatcataaggttt
tctaataacttgtgttagtggaaggaaaaaattctttaccatggaaataa
acatgctaattgctctgaacaagacacgtgtaagatatttattgaaccgg
ccaaatttggctaattcagcatattttcctatttgtaaatgcctttcttc
ataatataagtgttctgcttatacagtctacattattagttagaatgtag
aaaacatcagggaaagtgtgtgtgtgcatggtgtaagaaaacattttatt
ttattaaaatagtggttctgtagtgaagctttatttattataaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62287245_62288173
seq2: B6Ng01-022J20.b_49_976 (reverse)

seq1  GATACATACCACTTATTGTGATTATACAGTGCTTGAATACCTGTCTTCTA  50
      |||||| |||||||| ||||| ||||||||||||||||||||||||| ||
seq2  GATACA-ACCACTTAATGTGA-TATACAGTGCTTGAATACCTGTCTT-TA  47

seq1  GCCTGCTCATTGCTCACTTTAATGTACATTTACCACAAGCTTCCCTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCATTGCTCACTTTAATGTACATTTACCACAAGCTTCCCTTTGA  97

seq1  TTAAGTCAC-AAATGGGCGGTTGTGGAATATCAGAAGAACCCTGGAACAG  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCACAAAATGGGCGGTTGTGGAATATCAGAAGAACCCTGGAACAG  147

seq1  TGGTATAACGTCAGGACTTCTCCCGAGTAATGGCTATAGTGTTGCTCATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAACGTCAGGACTTCTCCCGAGTAATGGCTATAGTGTTGCTCATC  197

seq1  TTGCAAGTTGTTGAAAAGAAAAAAAAAAAGAGTTGATAAGTCATGCGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGTTGTTGAAAAGAAAAAAAAAAAGAGTTGATAAGTCATGCGTTT  247

seq1  TATTTTGCAAACATAACTGGGCGATTACATGGAGCTGAAGATTGTCAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCAAACATAACTGGGCGATTACATGGAGCTGAAGATTGTCAAAA  297

seq1  TATTCCAAAAATATTTTAAAACTTTCTACTTATCTAGCTTTGGGAGGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAAAATATTTTAAAACTTTCTACTTATCTAGCTTTGGGAGGCCA  347

seq1  ATATCTTAGAATATTCACTAAGTAGGCAGATCATCTTCCTATAGTTTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAGAATATTCACTAAGTAGGCAGATCATCTTCCTATAGTTTCTT  397

seq1  AAACCCTGGTTTGGGGTTTTCTGGTCAGGAATTTATATTTCTGTGTAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGGTTTGGGGTTTTCTGGTCAGGAATTTATATTTCTGTGTAACT  447

seq1  CATTTTTATTCCTACATTGTAACATCTTAGCAGTAAGAATGGTCCCTTAG  499
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTTTTATTCCTACATTGTAACATTTTAGCAGTAAGAATGGTCCCTTAG  497

seq1  GGAACCAGAAATGTATTTTAATATCCTTTCTTTATGACCATACTTGGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAGAAATGTATTTTAATATCCTTTCTTTATGACCATACTTGGTTT  547

seq1  AGTTTAGACATGGTTCAGGAAAACAAAAGTGGTGGAAAAAAAACACTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGACATGGTTCAGGAAAACAAAAGTGGTGGAAAAAAAACACTTGT  597

seq1  GAACTAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGG-AAAAAAA  648
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAACTAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAGGAAAAAAAA  647

seq1  AAAAGGAAAGCCTTATTTGACATGATTCCTTTGGGGAATACATAGAGGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGCCTTATTTGACATGATTCCTTTGGGGAATACATAGAGGTT  697

seq1  TTATTTCCATTTTTCATTTTCATTTTTATAATGGTTTATGTTTCTCATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCATTTTTCATTTTCATTTTTATAATGGTTTATGTTTCTCATAT  747

seq1  AGTCACTAGGTGGCTTAATATAGAAAACAAGTTTATGAGAATTGAACGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTAGGTGGCTTAATATAGAAAACAAGTTTATGAGAATTGAACGTT  797

seq1  TATTTGACAGCTGGATAACAAAAAGAAATAAAGGGGACTATTTATGTTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACAGCTGGATAACAAAAAGAAATAAAGGGGACTATTTATGTTCT  847

seq1  TAGATAGTATGCACAGTGTAAGCTAATGTTTGCATGACTCTGAGGTGGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTATGCACAGTGTAAGCTAATGTTTGCATGACTCTGAGGTGGTT  897

seq1  CCCATGTTAATATAGAACCGAAAGTGAATTC  929
      |||||||||||||||||||||||||||||||
seq2  CCCATGTTAATATAGAACCGAAAGTGAATTC  928

seq1: chr2_62113793_62114846
seq2: B6Ng01-022J20.g_66_1111

seq1  GAATTCTTTGCTCAAATATGAACCAAATAGCCACATGATATAAAGCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTCAAATATGAACCAAATAGCCACATGATATAAAGCAGAT  50

seq1  TTTGGTGAGATTGAAAGACTATTCTTAGAGAGTTTACAGGCTATGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAGATTGAAAGACTATTCTTAGAGAGTTTACAGGCTATGAAGCA  100

seq1  CTGACCCAATTTCTCTTTGCTTCTGAGCTGACCTAAATTTAAGGATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAATTTCTCTTTGCTTCTGAGCTGACCTAAATTTAAGGATGTAT  150

seq1  TCTGAAGTATTTAAAATGAAATTTAATGGTGTTTCAATTTACATTAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTATTTAAAATGAAATTTAATGGTGTTTCAATTTACATTAAAAC  200

seq1  ATCCCAGCATCAGTATTAAGACAATGCATTTTCTGCCTCAAAAAGCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCATCAGTATTAAGACAATGCATTTTCTGCCTCAAAAAGCTGAT  250

seq1  ATTCTGACCTAGAATTCGGCTAGCATCAAATCAGAGAAGTTATAGTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACCTAGAATTCGGCTAGCATCAAATCAGAGAAGTTATAGTCTAG  300

seq1  AAATACCTCCATAAACTTTCTAAAGTTCCTCTGAATTTTTATTTTTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCCATAAACTTTCTAAAGTTCCTCTGAATTTTTATTTTTCTAT  350

seq1  AATTTATGGTTACTCAAATTTTTGAAGCAGATATTTGCTTTACAAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGGTTACTCAAATTTTTGAAGCAGATATTTGCTTTACAAATAAG  400

seq1  TTAGTGGTTTATGCTTACCAATATCCAACAAGGCACTGTGGAGTAGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTTTATGCTTACCAATATCCAACAAGGCACTGTGGAGTAGAGCT  450

seq1  CATTTTCTGATGTAATGCTTTTTCTAATTGATGTTGTGATCGCTCTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGATGTAATGCTTTTTCTAATTGATGTTGTGATCGCTCTGTAG  500

seq1  CATTCAAATTTATCTTTCCTATTGGAAACATTGCCTTGGCATATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAATTTATCTTTCCTATTGGAAACATTGCCTTGGCATATATATAT  550

seq1  ATACACACACACACTATTGATGCTGTGAATGTGATTTGATACTTTTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACTATTGATGCTGTGAATGTGATTTGATACTTTTAATC  600

seq1  AAGGTATCTGCCAATCCTGTTGTGAAGTGTTCACAAATTATTTTGGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATCTGCCAATCCTGTTGTGAAGTGTTCACAAATTATTTTGGTTTA  650

seq1  TGGACTATGCAATGCACTGCTCATTCGCTTGTCATGGCTCTGCTGGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATGCAATGCACTGCTCATTCGCTTGTCATGGCTCTGCTGGGTGC  700

seq1  TATAGGGGGTCACAGCTATTTACTTTGCAGCATTAGTCATCATAAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGGGTCACAGCTATTTACTTTGCAGCATTAGTCATCATAAGGTTT  750

seq1  TCTAATAACTTGTGTTAGTGGAAGGAAAAAAATTCTTTACCATGGAAATA  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTAATAACTTGTGTTAGTGGAAGG-AAAAAATTCTTTACCATGGAAATA  799

seq1  AACATGCTAATTGCTCTGAACAAGACACGTGTAAGATATTTATTGAACCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTAATTGCTCTGAACAAGACACGTGTAAGATATTTATTGAACCG  849

seq1  GCCAAATTTGGCTAATTCAGCATATTTTCCTATTTGTAAATGCCTTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATTTGGCTAATTCAGCATATTTTCCTATTTGTAAATGCCTTTCTT  899

seq1  CATAATATAAGGTGTCCTGCTTATACAGTCTACATTTATTAGTTAGAATG  950
      |||||||||| |||| |||||||||||||||||| |||||||||||||||
seq2  CATAATATAA-GTGTTCTGCTTATACAGTCTACA-TTATTAGTTAGAATG  947

seq1  TAGAAAACATCAAGTGGAAAGTGTGTGTGTGCATGGTGTAGAAAAACATT  1000
      ||||||||||||   |||||||||||||||||||||||||  ||||||||
seq2  TAGAAAACATCA--GGGAAAGTGTGTGTGTGCATGGTGTAAGAAAACATT  995

seq1  TTTATTTTTATATAAAATAAGTGTTCTGTAGTGTAGCTTTATTTATTATA  1050
      ||   |||||| |||||||   ||||||||||| ||||||||||||||||
seq2  TT--ATTTTAT-TAAAATAGTGGTTCTGTAGTGAAGCTTTATTTATTATA  1042

seq1  AATC  1054
      ||||
seq2  AATC  1046