BAC Information

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BAC

Clone NameB6Ng01-022L08
Chromosome2 (Build37)
Map Location 86,410,015 - 86,411,165
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1
Downstream geneOlfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022L08.bB6Ng01-022L08.g
ACCDH854840DH854841
length1,1301,165
definitionDH854840|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L08, 5' end.DH854841|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaaagtatctgaatttataatacccaattctacaaggttaac
aaagtatgaaaaggcaacatgtttcttagaatgtaaaaaatgttgagaag
agacaaattttcattatttaccacatatacttatatgtactcatcatata
cactttaatttttagtattttattattataccctcccctcaacaaaccct
caagatttgaactgtttctgaatcacaggtattaatgacatcttatgcta
taacatgatctattttttaaaaattagaaattattatcattagaacatta
tttgaagaagacgtgaaatgagtattatgccaccacaataacataccata
tgaagtaagcttacttgatctgttctgataatcatatatatatatatata
tataatgtgtgtgtaacttctgtgattttatttatttacatgtagcacac
aattatatgttggtcactacaccctttactgtcatttgttctttttcatt
gtatagcatttattgacaatttctgttcacagtttttctagttaattatt
ttaacttaatatcatgtgcagctgtgatatgctacctaatttctacatta
ctaaatttattgagcttatttatatttggttgtatacttgcctgtgtgta
tagtatcctgtaatgtatttgaaaggaattcttgtatcaaagtacacaga
cacacacacttatatacttggcatatttccttcattctctgtggtattgt
attctttaatactggttctatacaccatattactacatgaataacttaca
aacattcatactatagtttgtagtttatattattattttctccaaagaaa
tttacaaaggcttaataccataaatccaatttaagtggcctattttcttc
agtcttcttaaatgtccacaattcttctagttcctcaataatgtattaaa
tgaaatttgttatatttgaatactatatatttaaatgtcacaatagagct
ttaaggattctattgaattctacaattgtgtaacattaaaatttaaatat
aagcatacagaaagaaagcaaaaccaggtctgcatgtcctcactttattc
agcaatgaagtcatgagatgcttgattttt
gaattctcacctgagaattctgaccaaatggctgagaagcacctgaaaaa
aatgttcagcatccttaatcatcaaggaaatgcaaatcaaaacaaccctg
agattccacctcacaccagtcagaatggctaagatcaaaaattcaggtga
cagcagatgctggcgaggatgtggagaaagaggaacactcctccattgtt
ggtgggattgcaagcttgtacaaccactctggaaatcagtctggcggttc
ctcagaaaattggacatagtactactggagaaacctgcaatacctctcct
gggcatatatccagaagatgttccaccggtaagaaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgcaacagaggaatggatacaaaaaaatgtggtatatttacacaatgg
agtactactcagctattaaaaataatgaatttatgaaattcctaggcaaa
tggttggacctggaaggcattatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgcaaaacacatgaacctcaag
aagaacgaagacctaattgtggacactttgtcccttcttagaattgggaa
caatcatggaaggagttacagagacaaagtttggaactgagacaaaagga
tggactatctagagactgccataccctggcatccatcccatatcagcctc
caaatactgaaaccattgcacacactagcaagattttgctgaaaggaccc
tgatatagctgtctcttgtgaggctatgccagggcctagcaaacacacaa
gtggatgctcagagtctgctattggatggatcacagggcctcaatggagg
agctagagaaagtacccaggagctaaagggatctgcaaccttataggtga
acaatatatgactaccagtactcccggagcctcgtgtcttctagctgcat
atgtatcaaaagatggcctagtgcatcagtgaagagagccatttgtcctt
gcaaaatttatatgcctcagacagggaatgccagggccaagaattggaat
ggtggtggtggcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86410015_86411165
seq2: B6Ng01-022L08.b_41_1170 (reverse)

seq1  AAAAATTCAGAGCATTCCTCATTGACTCTCATTGCCTGACTAAAGTGAGG  50
       |||| ||| |||||  |||| ||||| |||||| |||| ||||||||||
seq2  -AAAAATCA-AGCAT--CTCA-TGACT-TCATTG-CTGAATAAAGTGAGG  43

seq1  ACATGCAGAACTGTGTTTTTGCTTTTCTTTTCTTGTAATGTTTATAATTT  100
      ||||||||| |  || |||||| |||||||   ||| ||| |||| ||||
seq2  ACATGCAGACC--TGGTTTTGC-TTTCTTT--CTGT-ATGCTTAT-ATTT  86

seq1  AAATTTTAATGTTACACAAATTTGTATGAATTCAATAGAATTCTTAAAGC  150
      |||||||||||||||||||  ||||| |||||||||||||| ||||||||
seq2  AAATTTTAATGTTACACAA--TTGTA-GAATTCAATAGAATCCTTAAAGC  133

seq1  TCTATTGTGAACATTTTAATTATATAGTATTCAAATATAACAAATTTCAT  200
      ||||||||| ||| ||||| ||||||||||||||||||||||||||||||
seq2  TCTATTGTG-ACA-TTTAAATATATAGTATTCAAATATAACAAATTTCAT  181

seq1  TTAATACATTATTGAGGAACCTAGAAGAATTGTGGACATTTAAGAAGACT  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAATACATTATTGAGGAA-CTAGAAGAATTGTGGACATTTAAGAAGACT  230

seq1  GAAGAAAATAGGCCACTTAAATTGGATTTATGGTATTAAGCCTTTTGTAA  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAGAAAATAGGCCACTTAAATTGGATTTATGGTATTAAGCC-TTTGTAA  279

seq1  ATTTCTTTGGAGAAAATAATAATATAAACTACAAACTATAGTATGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTGGAGAAAATAATAATATAAACTACAAACTATAGTATGAATGT  329

seq1  TTGTAAGTTATTCATGTAGTAATATGGTGTATAGAACCAGTATTAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGTTATTCATGTAGTAATATGGTGTATAGAACCAGTATTAAAGAA  379

seq1  TACAATACCACAGAGAATGAAGGAAATATGCCAAGTATATAAGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACCACAGAGAATGAAGGAAATATGCCAAGTATATAAGTGTGTGT  429

seq1  GTCTGTGTACTTTGATACAAGAATTCCTTTCAAATACATTACAGGATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTACTTTGATACAAGAATTCCTTTCAAATACATTACAGGATACT  479

seq1  ATACACACAGGCAAGTATACAACCAAATATAAATAAGCTCAATAAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAGGCAAGTATACAACCAAATATAAATAAGCTCAATAAATTTA  529

seq1  GTAATGTAGAAATTAGGTAGCATATCACAGCTGCACATGATATTAAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTAGAAATTAGGTAGCATATCACAGCTGCACATGATATTAAGTTA  579

seq1  AAATAATTAACTAGAAAAACTGTGAACAGAAATTGTCAATAAATGCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTAACTAGAAAAACTGTGAACAGAAATTGTCAATAAATGCTATA  629

seq1  CAATGAAAAAGAACAAATGACAGTAAAGGGTGTAGTGACCAACATATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAAAGAACAAATGACAGTAAAGGGTGTAGTGACCAACATATAAT  679

seq1  TGTGTGCTACATGTAAATAAATAAAATCACAGAAGTTACACACACATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTACATGTAAATAAATAAAATCACAGAAGTTACACACACATTAT  729

seq1  ATATATATATATATATATGATTATCAGAACAGATCAAGTAAGCTTACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATGATTATCAGAACAGATCAAGTAAGCTTACTTC  779

seq1  ATATGGTATGTTATTGTGGTGGCATAATACTCATTTCACGTCTTCTTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTATGTTATTGTGGTGGCATAATACTCATTTCACGTCTTCTTCAA  829

seq1  ATAATGTTCTAATGATAATAATTTCTAATTTTTAAAAAATAGATCATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTCTAATGATAATAATTTCTAATTTTTAAAAAATAGATCATGTT  879

seq1  ATAGCATAAGATGTCATTAATACCTGTGATTCAGAAACAGTTCAAATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATAAGATGTCATTAATACCTGTGATTCAGAAACAGTTCAAATCTT  929

seq1  GAGGGTTTGTTGAGGGGAGGGTATAATAATAAAATACTAAAAATTAAAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTGTTGAGGGGAGGGTATAATAATAAAATACTAAAAATTAAAGT  979

seq1  GTATATGATGAGTACATATAAGTATATGTGGTAAATAATGAAAATTTGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGATGAGTACATATAAGTATATGTGGTAAATAATGAAAATTTGTC  1029

seq1  TCTTCTCAACATTTTTTACATTCTAAGAAACATGTTGCCTTTTCATACTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCAACATTTTTTACATTCTAAGAAACATGTTGCCTTTTCATACTT  1079

seq1  TGTTAACCTTGTAGAATTGGGTATTATAAATTCAGATACTTTGTAGAATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACCTTGTAGAATTGGGTATTATAAATTCAGATACTTTGTAGAATT  1129

seq1  C  1151
      |
seq2  C  1130