BAC Information

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BAC

Clone NameB6Ng01-022P13
Chromosome2 (Build37)
Map Location 97,185,227 - 97,186,378
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043267
Downstream geneLrrc4c, LOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P13.bB6Ng01-022P13.g
ACCDH855023DH855024
length1,127695
definitionDH855023|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P13, 5' end.DH855024|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacttaaatcaacatttcagaaattattaaccatttgaaaaaa
acacaaataaaacgctagactaccaaacttcaaaaagtattagtaatatc
ataaagaataaaaccatccatgatctcttgaagccccacaaatgatcttt
gatatccaatagctgatgattctttttcttctttctcttttcctctttct
cctcgtccttcttcttcctccttctgctacttaatcttaattcttcccct
ccaccactttgtgaggcagaatattttgtagtacaaattggttctttgat
catcttgcctctgattcctaagcttcaataaatattttgaaaattatata
attaatatatagtcatgatttcttggattttatatttaacttcagattgt
taacttttttctaattataaaggtatatgtgtgtgaaagaaagcatcttg
tataggatgtgacaacaagaatacactgtgaagtactcagaaaagccaag
tgactaagctaatctatgtagcatgggacttcatagagttctagacgata
gcctcacactttctagcactaattataaacaagcactgtcaaatatttat
ttccaaatattatgcacagggagcacaatgtgaactgcaaggtatttgaa
ttacctatgaacaaatgcctcagctacacacatcccacaacttaccatgc
atcattgataaaaagcatgttgtgttgggactttttgtattcatctgtga
cttatttatttatttcactacacaatatacatgtaataattagaagtaaa
tatagacagagatcagtctccttagcataacagttgaatgatgggtaaat
gctcaaagcttttattgagaccatccaggttgatgggagatatgctgaaa
aaattagcaaggattacatgtccccaaatcacagcttcctttgcataatc
tggtttgacttgtccgttaagggcaaagcacatttgagagggacatgctc
tgtgtttatgtcactcctcctccacttcttcatatgttcttctgcatctc
ggttctgctcatgctttcatattgagaactcagtcacaatcaggaatcct
catgactgatgcatctttggaacattg

gaattctatatttagctctgtaacctattttttaatagggttatttggtt
ctctgtagtctaacttcttgagttgtttgtatattttggatattagccct
ctattggatgtagggttggtaaagatcttttcccaatcacagaccaaatg
aagctcaaaaagaaggaagatcaaagtatggatatttcagtccttctttg
aagggggaacaaaatacccattggaggagatacaaagtgtggagcagaga
cttaaagaaagaccatcaagagacttaccccacctggggatcaatcccat
atactgtaaccaaacccagacactattgttgatgccaataagagcttgct
gacaggagcctgatatagctgtctcctgagaggctctgccagtgcctaac
atattcagaggtggaagatctcagccaaccattagactgagcacaaggtt
cccaatggaggagctagaggaaggacaaaggagctaaatgaggtacagcc
ccataggagaaacaacaataggaactaaccagtacccctagagctcccag
ggactaaaccatgaaccatagagtatacatggagggacccatgtttccag
ctgcatgtgtagcagaggatggccttgttggacatcagtgggaggagagg
cccctggtcctctgaaggttccatgctccagggtagggaaatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97185227_97186378
seq2: B6Ng01-022P13.b_47_1173

seq1  GAATTCACACTTAAATCAACATTTCAGAAATTATTAACCATTTGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTTAAATCAACATTTCAGAAATTATTAACCATTTGAAAAAA  50

seq1  ACACAAATAAAACGCTAGACTACCAAACTTCAAAAAGTATTAGTAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATAAAACGCTAGACTACCAAACTTCAAAAAGTATTAGTAATATC  100

seq1  ATAAAGAATAAAACCATCCATGATCTCTTGAAGCCCCACAAATGATCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAATAAAACCATCCATGATCTCTTGAAGCCCCACAAATGATCTTT  150

seq1  GATATCCAATAGCTGATGATTCTTTTTCTTCTTTCTCTTTTCCTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCAATAGCTGATGATTCTTTTTCTTCTTTCTCTTTTCCTCTTTCT  200

seq1  CCTCGTCCTTCTTCTTCCTCCTTCTGCTACTTAATCTTAATTCTTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTCCTTCTTCTTCCTCCTTCTGCTACTTAATCTTAATTCTTCCCCT  250

seq1  CCACCACTTTGTGAGGCAGAATATTTTGTAGTACAAATTGGTTCTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTTTGTGAGGCAGAATATTTTGTAGTACAAATTGGTTCTTTGAT  300

seq1  CATCTTGCCTCTGATTCCTAAGCTTCAATAAATATTTTGAAAATTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCCTCTGATTCCTAAGCTTCAATAAATATTTTGAAAATTATATA  350

seq1  ATTAATATATAGTCATGATTTCTTGGATTTTATATTTAACTTCAGATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATATAGTCATGATTTCTTGGATTTTATATTTAACTTCAGATTGT  400

seq1  TAACTTTTTTCTAATTATAAAGGTATATGTGTGTGAAAGAAAGCATCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTTCTAATTATAAAGGTATATGTGTGTGAAAGAAAGCATCTTG  450

seq1  TATAGGATGTGACAACAAGAATACACTGTGAAGTACTCAGAAAAGCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATGTGACAACAAGAATACACTGTGAAGTACTCAGAAAAGCCAAG  500

seq1  TGACTAAGCTAATCTATGTAGCATGGGACTTCATAGAGTTCTAGACGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAGCTAATCTATGTAGCATGGGACTTCATAGAGTTCTAGACGATA  550

seq1  GCCTCACACTTTCTAGCACTAATTATAAACAAGCACTGTCAAATATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACACTTTCTAGCACTAATTATAAACAAGCACTGTCAAATATTTAT  600

seq1  TTCCAAATATTATGCACAGGGAGCACAATGTGAACTGCAAGGTATTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATATTATGCACAGGGAGCACAATGTGAACTGCAAGGTATTTGAA  650

seq1  TTACCTATGAACAAATGCCTCAGCTACACACATCCCACAACTTACCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATGAACAAATGCCTCAGCTACACACATCCCACAACTTACCATGC  700

seq1  ATCATTGATAAAAAGCATGTTGTGTTGGGACTTTTTGTATTCATCTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGATAAAAAGCATGTTGTGTTGGGACTTTTTGTATTCATCTGTGA  750

seq1  CTTATTTATTTATTTCACTACACAATATACATGTAATAATTAGAAGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATTTATTTCACTACACAATATACATGTAATAATTAGAAGTAAA  800

seq1  TATAGACAGAGATCAGTCTCCTTAGCATAACAGTTGAATGATGGGTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACAGAGATCAGTCTCCTTAGCATAACAGTTGAATGATGGGTAAAT  850

seq1  GCTCAAAGCTTTTATTGAGACCATCCAGGTTGATGGGAGATATGCTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCTCAAAGCTTTTATTGAGACCATCCAGGTTGATGGGAGATATGCTG-AA  899

seq1  AAAATTAGCAAGGAATTACATGTCCCCAAATCACAGCTTCCTTTGCATAA  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGCAAGG-ATTACATGTCCCCAAATCACAGCTTCCTTTGCATAA  948

seq1  TCTGGTTTGACTTGTCCGTTAAGGGCAAAGCACATTTGAGAAGGGGAACC  1000
      |||||||||||||||||||||||||||||||||||||||||  ||||  |
seq2  TCTGGTTTGACTTGTCCGTTAAGGGCAAAGCACATTTGAGA--GGGA--C  994

seq1  ATGCTCTGTGTTTAATGTCACTCCTTCCCTCCACTTCTCTCATATGTTCT  1050
      ||||||||||||| |||||||||||  ||||||||||| |||||||||||
seq2  ATGCTCTGTGTTT-ATGTCACTCCT--CCTCCACTTCT-TCATATGTTCT  1040

seq1  TCTGCATCTCCGTTCTGCTTCATGCTTTCCATTATTGTATGTAACTCAGT  1100
      |||||||||| ||||||| ||||||||||   |||||     ||||||||
seq2  TCTGCATCTCGGTTCTGC-TCATGCTTTC--ATATTG---AGAACTCAGT  1084

seq1  CACAAATTCAAGGGGATTCTCTATGAACTGTAGTGCATCTTTGGGAACAT  1150
      |||||  |||  || || ||| ||| ||||   ||||||||| |||||||
seq2  CACAA--TCA--GGAATCCTC-ATG-ACTG--ATGCATCTTT-GGAACAT  1125

seq1  TG  1152
      ||
seq2  TG  1127


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