BAC Information

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BAC

Clone NameB6Ng01-023G11
Chromosome2 (Build37)
Map Location 34,075,529 - 34,212,746
singlet/doubletdoublet
Overlap genePbx3
Upstream geneRalgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
Downstream geneLOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023G11.bB6Ng01-023G11.g
ACCDH855334DH855335
length9791,033
definitionDH855334|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G11, 5' end.DH855335|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,075,529 - 34,076,846)(34,211,713 - 34,212,746)
sequence
gaattcaaggagcaggtttctagttgcttaattaaaggttgggaacctta
caatatttttgccttcagcaaaaatgtatttcaatataattatagtagat
agctttcaatgtgtcatctctattatagcagctgtaaattacagcatgaa
ttgcctgtatacaagcatttcttctgctacaagcagagtggaagagctgc
attgagcatgatatatcttttcctcttcaactgaggacaaacactgaggt
caaatttcatttgcaaaaccagtgtgtccattctcttttggtagcaaggt
agagaaaccaagaaagcacagctcatctgagagcttcagttcttacaaac
cagactcattagcacccatggcttatgttcattcagaattcatctattct
aacatctgggactctagtcgtaggtacatatttgaaaaatacagtaaagg
tattttctaagacttgtagctaatcaagaagatggaggcttgtctctcaa
caaaaaagagcaataaactcaagatgaagtattgcaaggtgtttgctgaa
agccttggaaaactatcaaatcccaactaggtgtcagatcaatgagacca
aagtagaatggtattgtttcctgctgaatgatggtaatattaaaaaaccc
tcactgtaacacacagccagtatgtaatatttcagaaacatttataactg
aagttggatgattatcccaaaattcattaaatttccaaatctatgaaaca
gagatacaagatcaaagaacatttttctggaggggaaaagaatagatttc
tacagataatccatgcctaatatgtaaagctgaaccttgtagctcagatt
tgattttgctcctgctgtagcttgctcagctgtgactgtggctgtgcttg
taacttgtagggttctttacttactgcagtggtgatgtttggtaatttta
tgcaatctaaactgagtaggcctcggatg
gaattcttgacatttgagttatttttttccctttaagagaatatttactt
agctagtattcacttaattagaactgactgtttaatgttttctgggcggg
tatttatggtattttctttgctatatttgcattccagaaattaagtcccc
ctgccattattcggcaagcctttcatacattagaatgatgaattgaaagc
agaaatgggaaaaagactgcaatgcaatgaaaatttaatcagcgtcttct
gctgctttaataaggcaaataattcttattggccgctgtgttaaggtttc
taatatttaattcataacaaaccttgcattattctgcagttgcatcgaca
gctccactttgctgcctgccaacaggcaaccataaaaacttaaaagcaga
tgtaaatgtctaaaacaaggagaatgattagatctaaagcggcaaaaaaa
aaaaaaaaaaaaaaaaaaacaacaatattgtgaaagaatttgatggatat
ctgtatttagtgatgcaaaaatgatattaattaaattttctcaaacagat
tggttttgacttgataaccttttgtaaagtgtggtctttaagcaaatgtc
aatagagtgtttggttataatcttctttaaactggacacgaactgtgctg
gttctactggaagtatccggtttatattcctgtgcatatgaactcacagc
tagtactgtgctgaaatggagccagtgggagaaaatgttctgtctttggt
taactcagattgaggaaagcagtagcttttggaggctatttctgtttgaa
atgcatgttaaaaaatgttatcctgggattaaaggagtgtatgctttcat
ttctgacccctagctcagatgattctgcaatgacaacgccgtctttctgg
attaccatctggatatctggggcttttgtgtgaggtgtgttgggcattac
gtctggacttgcaaatgaacaaaaaagatattgttactgatttcattgaa
aacagcctgatacattcaaaaagatgtggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34075529_34076846
seq2: B6Ng01-023G11.b_44_1022

seq1  GAATTCAAGGAGCAGGTTTCTAGTTGCTTAA-GAAAGGTTGGGAACCTTA  49
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  GAATTCAAGGAGCAGGTTTCTAGTTGCTTAATTAAAGGTTGGGAACCTTA  50

seq1  CAATATTTTTGCCTTCAGCAAAAATGTATTTCAATATAATTATAGTAGAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTTGCCTTCAGCAAAAATGTATTTCAATATAATTATAGTAGAT  100

seq1  AGCTTTCAATGTGTCATCTCTATTATAGCAGCTGTAAATTACAGCATGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCAATGTGTCATCTCTATTATAGCAGCTGTAAATTACAGCATGAA  150

seq1  TTGCCTGTATACAAGCATTTCTTCTGCTACAAGCAGAGTGGAAGAGCTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTATACAAGCATTTCTTCTGCTACAAGCAGAGTGGAAGAGCTGC  200

seq1  ATTGAGCATGATATATCTTTTCCTCTTCAACTGAGGACAAACACTGAGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCATGATATATCTTTTCCTCTTCAACTGAGGACAAACACTGAGGT  250

seq1  CAAATTTCATTTGCAAAACCAGTGTGTCCATTCTCTTTTGGTAGCAAGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCATTTGCAAAACCAGTGTGTCCATTCTCTTTTGGTAGCAAGGT  300

seq1  AGAGAAACCAAGAAAGCACAGCTCATCTGAGAGCTTCAGTTCTTACAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCAAGAAAGCACAGCTCATCTGAGAGCTTCAGTTCTTACAAAC  350

seq1  CAGACTCATTAGCACCCATGGCTTATGTTCATTCAGAATTCATCTATTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCATTAGCACCCATGGCTTATGTTCATTCAGAATTCATCTATTCT  400

seq1  AACATCTGGGACTCTAGTCGTAGGTACATATTTGAAAAATACAGTAAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGGGACTCTAGTCGTAGGTACATATTTGAAAAATACAGTAAAGG  450

seq1  TATTTTCTAAGACTTGTAGCTAATCAAGAAGATGGAGGCTTGTCTCTCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTAAGACTTGTAGCTAATCAAGAAGATGGAGGCTTGTCTCTCAA  500

seq1  CAAAAAAGAGCAATAAACTCAAGATGAAGTATTGCAAGGTGTTTGCTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGAGCAATAAACTCAAGATGAAGTATTGCAAGGTGTTTGCTGAA  550

seq1  AGCCTTGGAAAACTATCAAATCCCAACTAGGTGTCAGATCAATGAGACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGGAAAACTATCAAATCCCAACTAGGTGTCAGATCAATGAGACCA  600

seq1  AAGTAGAATGGTATTGTTTCCTGCTGAATGATGGTAATATTAAAAAACCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAATGGTATTGTTTCCTGCTGAATGATGGTAATATTAAAAAACCC  650

seq1  TCACTGTAACACACAGCCAGTATGTAATATTTCAGAAACATTTATAACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTAACACACAGCCAGTATGTAATATTTCAGAAACATTTATAACTG  700

seq1  AAGTTGGATGATTATCCCAAAATTCATTAAATTTCCAAATCTATGAAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGATGATTATCCCAAAATTCATTAAATTTCCAAATCTATGAAACA  750

seq1  GAGATACAAGATCAAAGAACA-TTTTCTGGAGGGGAAAAGAATAGAATTC  798
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  GAGATACAAGATCAAAGAACATTTTTCTGGAGGGGAAAAGAATAGATTTC  800

seq1  TACAGATAATCCATGCCTAATATGTAAAGCTGAACCTTGTAGCTCAGATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAATCCATGCCTAATATGTAAAGCTGAACCTTGTAGCTCAGATT  850

seq1  TGATTTTGCTCCTGCTGTAGCTTGCTCAGCTGTGACTGTGGCTGTGCTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGCTCCTGCTGTAGCTTGCTCAGCTGTGACTGTGGCTGTGCTTG  900

seq1  TAACTTGTAGGGTTCTTTAATTTACTGCAGTGGTGATGTTTGTTAATTTT  948
      |||||||||||||||||| | ||||||||||||||||||||| |||||||
seq2  TAACTTGTAGGGTTCTTT-ACTTACTGCAGTGGTGATGTTTGGTAATTTT  949

seq1  ATGGCAATCTAAATCTGAGTAGGCCTCAGAT-ACATTTTCATTACAGCTT  997
      || |||||||||| ||||||||||||| |||                   
seq2  AT-GCAATCTAAA-CTGAGTAGGCCTCGGATG------------------  979

seq1  CATTGCAAAACACAGCAGAGTAAATACTGCTTAAGATTCTGGTGTAGCTT  1047
                                                        
seq2  --------------------------------------------------  979

seq1  ATTTCTCTGGGACTCACAGAATCTGCCTTGATGAACAAGGCCTTCCTAAT  1097
                                                        
seq2  --------------------------------------------------  979

seq1  TCCTAGTTCCTGATAAACGTTCTGCCATTTGGCATTCCCGTGATCACTTT  1147
                                                        
seq2  --------------------------------------------------  979

seq1  TAAGAAGAAAATATGATTTTTGGAAAACCTTTTTTTTTTTTTTTTTGCTT  1197
                                                        
seq2  --------------------------------------------------  979

seq1  TCAATATAGTTTATTCTGATGAAGTTACAAAGTAGATACAAAATACGGAA  1247
                                                        
seq2  --------------------------------------------------  979

seq1  AGTCTTTAAGATACTTGTTTTCATCTTGTTCCCATTTCAAACAAACACCA  1297
                                                        
seq2  --------------------------------------------------  979

seq1  ACATGGGCTGATCCTTGGATG  1318
                           
seq2  ---------------------  979

seq1: chr2_34211713_34212746
seq2: B6Ng01-023G11.g_71_1103 (reverse)

seq1  TTCTCCACATCTTTCTGAATGATTCAGACTGTTTTC-ATGGAATCAGTAA  49
      |||||||||||||| ||||||  |||| |||||||| ||| |||||||||
seq2  TTCTCCACATCTTTTTGAATGTATCAGGCTGTTTTCAATGAAATCAGTAA  50

seq1  CAATATC-TTTTTGTTCATTCTGCAAGTCCAGACGTAATGCCCAACACAA  98
      ||||||| |||||||||||| ||||||||||||||||||||||||||| |
seq2  CAATATCTTTTTTGTTCATT-TGCAAGTCCAGACGTAATGCCCAACAC-A  98

seq1  CCTCACACAAAAGCCCCAGATAATCCAGATGGTAATCCAGAAAGACGGCG  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTCACACAAAAGCCCCAGAT-ATCCAGATGGTAATCCAGAAAGACGGCG  147

seq1  TTGTCATTGCAGAATCATCTGAGCTAGGGGTCAGAAATGAAAGCATACAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGCAGAATCATCTGAGCTAGGGGTCAGAAATGAAAGCATACAC  197

seq1  TCCTTTAATCCCAGGATAACATTTTTTAACATGCATTTCAAACAGAAATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAATCCCAGGATAACATTTTTTAACATGCATTTCAAACAGAAATA  247

seq1  GCCTCCAAAAGCTACTGCTTTCCTCAATCTGAGTTAACCAAAGACAGAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAAAAGCTACTGCTTTCCTCAATCTGAGTTAACCAAAGACAGAAC  297

seq1  ATTTTCTCCCACTGGCTCCATTTCAGCACAGTACTAGCTGTGAGTTCATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCCCACTGGCTCCATTTCAGCACAGTACTAGCTGTGAGTTCATA  347

seq1  TGCACAGGAATATAAACCGGATACTTCCAGTAGAACCAGCACAGTTCGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGAATATAAACCGGATACTTCCAGTAGAACCAGCACAGTTCGTG  397

seq1  TCCAGTTTAAAGAAGATTATAACCAAACACTCTATTGACATTTGCTTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTAAAGAAGATTATAACCAAACACTCTATTGACATTTGCTTAAA  447

seq1  GACCACACTTTACAAAAGGTTATCAAGTCAAAACCAATCTGTTTGAGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACACTTTACAAAAGGTTATCAAGTCAAAACCAATCTGTTTGAGAAA  497

seq1  ATTTAATTAATATCATTTTTGCATCACTAAATACAGATATCCATCAAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTAATATCATTTTTGCATCACTAAATACAGATATCCATCAAATT  547

seq1  CTTTCACAATATTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGCCGCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACAATATTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGCCGCTT  597

seq1  TAGATCTAATCATTCTCCTTGTTTTAGACATTTACATCTGCTTTTAAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTAATCATTCTCCTTGTTTTAGACATTTACATCTGCTTTTAAGTT  647

seq1  TTTATGGTTGCCTGTTGGCAGGCAGCAAAGTGGAGCTGTCGATGCAACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTTGCCTGTTGGCAGGCAGCAAAGTGGAGCTGTCGATGCAACTG  697

seq1  CAGAATAATGCAAGGTTTGTTATGAATTAAATATTAGAAACCTTAACACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAATGCAAGGTTTGTTATGAATTAAATATTAGAAACCTTAACACA  747

seq1  GCGGCCAATAAGAATTATTTGCCTTATTAAAGCAGCAGAAGACGCTGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCCAATAAGAATTATTTGCCTTATTAAAGCAGCAGAAGACGCTGATT  797

seq1  AAATTTTCATTGCATTGCAGTCTTTTTCCCATTTCTGCTTTCAATTCATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCATTGCATTGCAGTCTTTTTCCCATTTCTGCTTTCAATTCATC  847

seq1  ATTCTAATGTATGAAAGGCTTGCCGAATAATGGCAGGGGGACTTAATTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATGTATGAAAGGCTTGCCGAATAATGGCAGGGGGACTTAATTTC  897

seq1  TGGAATGCAAATATAGCAAAGAAAATACCATAAATACCCGCCCAGAAAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCAAATATAGCAAAGAAAATACCATAAATACCCGCCCAGAAAAC  947

seq1  ATTAAACAGTCAGTTCTAATTAAGTGAATACTAGCTAAGTAAATATTCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAGTCAGTTCTAATTAAGTGAATACTAGCTAAGTAAATATTCTC  997

seq1  TTAAAGGGAAAAAAATAACTCAAATGTCAAGAATTC  1034
      ||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGAAAAAAATAACTCAAATGTCAAGAATTC  1033