BAC Information

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BAC

Clone NameB6Ng01-023L05
Chromosome2 (Build37)
Map Location 86,037,721 - 86,139,577
singlet/doubletdoublet
Overlap geneOlfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52
Downstream geneOlfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023L05.bB6Ng01-023L05.g
ACCDH855545DH855546
length1,0171,153
definitionDH855545|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L05, 5' end.DH855546|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,037,721 - 86,038,744)(86,138,406 - 86,139,577)
sequence
gaattcctcctttgtttgtatcatggcgggcccagtgtaggattgactta
tcagtggtagtgttagtctgtttcctagctgagttagtgtttgtcattct
ttaccactgtcacattgcacctctactttgtacattgcactctctggtaa
gaaatcattatgataaagtcacatgtaaagagacatcattgctgataata
actcatcatttgtctctattaactaaaaaagtcttacggttacagtgatt
taaaagaatcacatggacttgtcatgaatctctttaaagcggccttcaca
tccttgttcctcaggctgtagatcatggggttcagcattgggatgaccaa
ggtgtaaaacacagaggccatcttatcagtatctagtgagtggttagttt
gaggttgcaaatacataaacaacagcgtcccatagaaaactgtgacagcc
atcacatgtgaagcacaggtggaaaaggcttttttccttccttctgctga
acggatccttaggatagacaacacgatgttgaaataagataccaacacta
tactcatggaaaagaacaggtttgtagctgcagatataaagactacagtt
tctggaaggtaggtgtcagagcaggaaagtgccaagagagggacattatc
acagtaaaaatggtttatttttttggaggagcaataagacacagagaaca
cacaggatgaaacgacaatggctgtgcaaaagccatagaagtatgtgagc
gacaccaacagaaagcagacccgtcgagacaccaccaccatgtagagcag
tgggttgcagatggccacatagcggtcataggccatcacagcgagcataa
agatctctgctacaatgaaaaccaggaatcctcccagctgagtggcacat
tcgtagtataagtggtttctactgactaagaagtgaccagcatttaggag
caatgacagtggagttgccaaagttgatgaccgtcaggtgtctgaggaga
gtacatgggagtttgca
gaattctgaatgtatgtttatattcaggatgtgaaagaaattcttaaaaa
tagaaaaggataaaataatgtgtctaagtgtacctactgtacagctttgt
ccttacacatataaatttattataggaatgtcagaaataatgtattgttt
atttctatgcaattatttttgctttttagtctttttatgtctaaagagag
agaaaatatgttaataaatacaaagtggaatagtcaagtaaaataatacc
attatgtttaagtactttattaaacaaaaatttcaccatgatttaaaact
tagagtacattttagagacaaactcaatacaataaatatcatagatgttc
tcattaataacaaaacttgttatttatctccaaaagacataatgttctct
tgtatttatttagtttttaaacagcagatatatttaatattttatttact
gattaattcaaataataatatttcaaacagcgtttaagttaatttttaaa
ttaaattacacaccaaatttttgactttcacatgggtttcttcatcttaa
aaaatattgagattagaacttctaaacaaaagaattagaatgtactgact
taatgtacatctttctgcatgaaagctggctgataaataggacagaaatt
ttgctactctggtattaacatgagaaggacttcatctctatggctctctt
tgcagcttctttcacctctttgttcctgagactgtaaatcatgggattta
acataggaatcaccagtgtatagaacaccgacaccaccttctcttgttct
acagaatactgggagcttggctgaatgtaatttaagcttaaggtgccata
gaagatagtgacagcagtcaggtgagaagcacaagtggagaaggcttttt
gtcgtcagaagctgagcgtattctcaaatggccagagcatgagtaatagg
atatgacacaatcaagagagtaccaatggcgataactcagagagatcaga
gcagaaattcattcatggagtatagaatatgagagttcagcagcgatgta
gttccagaagagtgacccacttatttaggtccaaaagaacgcttactcaa
cttatgggttggtgttaaagagttatagttcacctatgactgacccagtg
acc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86037721_86038744
seq2: B6Ng01-023L05.b_46_1062

seq1  GAATTCCTCCTTTGTTTGTATCATGGCGGGCCCAGTGTAGGATTGACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTTGTTTGTATCATGGCGGGCCCAGTGTAGGATTGACTTA  50

seq1  TCAGTGGTAGTGTTAGTCTGTTTCCTAGCTGAGTTAGTGTTTGTCATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTAGTGTTAGTCTGTTTCCTAGCTGAGTTAGTGTTTGTCATTCT  100

seq1  TTACCACTGTCACATTGCACCTCTACTTTGTACATTGCACTCTCTGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACTGTCACATTGCACCTCTACTTTGTACATTGCACTCTCTGGTAA  150

seq1  GAAATCATTATGATAAAGTCACATGTAAAGAGACATCATTGCTGATAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATTATGATAAAGTCACATGTAAAGAGACATCATTGCTGATAATA  200

seq1  ACTCATCATTTGTCTCTATTAACTAAAAAAGTCTTACGGTTACAGTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCATTTGTCTCTATTAACTAAAAAAGTCTTACGGTTACAGTGATT  250

seq1  TAAAAGAATCACATGGACTTGTCATGAATCTCTTTAAAGCGGCCTTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAATCACATGGACTTGTCATGAATCTCTTTAAAGCGGCCTTCACA  300

seq1  TCCTTGTTCCTCAGGCTGTAGATCATGGGGTTCAGCATTGGGATGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTCCTCAGGCTGTAGATCATGGGGTTCAGCATTGGGATGACCAA  350

seq1  GGTGTAAAACACAGAGGCCATCTTATCAGTATCTAGTGAGTGGTTAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAAAACACAGAGGCCATCTTATCAGTATCTAGTGAGTGGTTAGTTT  400

seq1  GAGGTTGCAAATACATAAACAACAGCGTCCCATAGAAAACTGTGACAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGCAAATACATAAACAACAGCGTCCCATAGAAAACTGTGACAGCC  450

seq1  ATCACATGTGAAGCACAGGTGGAAAAGGCTTTTTTCCTTCCTTCTGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGTGAAGCACAGGTGGAAAAGGCTTTTTTCCTTCCTTCTGCTGA  500

seq1  ACGGATCCTTAGGATAGACAACACGATGTTGAAATAAGATACCAACACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATCCTTAGGATAGACAACACGATGTTGAAATAAGATACCAACACTA  550

seq1  TACTCATGGAAAAGAACAGGTTTGTAGCTGCAGATATAAAGACTACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGGAAAAGAACAGGTTTGTAGCTGCAGATATAAAGACTACAGTT  600

seq1  TCTGGAAGGTAGGTGTCAGAGCAGGAAAGTGCCAAGAGAGGGACATTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGGTAGGTGTCAGAGCAGGAAAGTGCCAAGAGAGGGACATTATC  650

seq1  ACAGTAAAAATGGTTTATTTTTTTGGAGGAGCAATAAGACACAGAGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAAATGGTTTATTTTTTTGGAGGAGCAATAAGACACAGAGAACA  700

seq1  CACAGGATGAAACGACAATGGCTGTGCAAAAGCCATAGAAGTATGTGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATGAAACGACAATGGCTGTGCAAAAGCCATAGAAGTATGTGAGC  750

seq1  GACACCAACAGAAGGCAGACCCGTCGAGACACCACCACCATGTAGAGCAG  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GACACCAACAGAAAGCAGACCCGTCGAGACACCACCACCATGTAGAGCAG  800

seq1  TGGGTTGCAGATGGCCACATAGCGGTCATAGGCCATCACAGCGAGCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGCAGATGGCCACATAGCGGTCATAGGCCATCACAGCGAGCATAA  850

seq1  AGATCTCTGCTACAATGAAAACCAGGAATCCTCCCAGCTGAGTGGCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGCTACAATGAAAACCAGGAATCCTCCCAGCTGAGTGGCACAT  900

seq1  TCGTAGTATAAAGTGGTTTTCTTACTGACTAAGAAGTTGACCAGCATTTT  950
      ||||||||| |||||||||   |||||||||||||| ||||||||| |||
seq2  TCGTAGTAT-AAGTGGTTT--CTACTGACTAAGAAG-TGACCAGCA-TTT  945

seq1  AGGAGCAATGACAGTGGAGTTGCCAAAGTTGATGACCGCCAGGTGTCTGA  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGAGCAATGACAGTGGAGTTGCCAAAGTTGATGACCGTCAGGTGTCTGA  995

seq1  GGAAGAAGTACATGGGAGTTTGCA  1024
      |||   ||||||||||||||||||
seq2  GGA--GAGTACATGGGAGTTTGCA  1017

seq1: chr2_86138406_86139577
seq2: B6Ng01-023L05.g_70_1222 (reverse)

seq1  GGTCACTGGGTCAGTCATAGGTGGAACTATTAACTCTTTGACA-CACACC  49
      |||||||||||||||||||||| |||||| ||||||||| ||| ||  ||
seq2  GGTCACTGGGTCAGTCATAGGT-GAACTA-TAACTCTTTAACACCAACCC  48

seq1  ATAAGTTTGAGTAAGCTGTCTTTTTGTGGACCTAATATAGTGGGTCACTT  99
      ||||| ||||||||||  |||||   |||||||||   |||||||||| |
seq2  ATAAG-TTGAGTAAGCGTTCTTT---TGGACCTAAATAAGTGGGTCAC-T  93

seq1  CTTCTGTGACATACCATCGCTGCTGATACTCTCATGTTCTGATACCTCCA  149
      |||||| ||  || |||||||||||| |||||||| |||| ||| |||||
seq2  CTTCTG-GAACTA-CATCGCTGCTGA-ACTCTCATATTCT-ATA-CTCCA  138

seq1  TGAATGAATTTCTGCTCTTGATCTTCTCTGGAGTTATCGCCATTGGTACT  199
      ||||||||||||||||| ||||| ||||| ||||||||||||||||||||
seq2  TGAATGAATTTCTGCTC-TGATC-TCTCT-GAGTTATCGCCATTGGTACT  185

seq1  CTCTTGATTGTGTTCATATCCTATTTACTCATTGCTCTGGCCATTTTGAG  249
      |||||||||||| |||||||||| ||||||| ||||||||||| ||||||
seq2  CTCTTGATTGTG-TCATATCCTA-TTACTCA-TGCTCTGGCCA-TTTGAG  231

seq1  AATACGCTCAGCTTCTGGACGACAAAAAGCCTTCTCCACTTGTGCTTCTC  299
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATACGCTCAGCTTCT-GACGACAAAAAGCCTTCTCCACTTGTGCTTCTC  280

seq1  ACCTGACTGCTGTCACTATCTTCTATGGCACCTTAAGCTTTAATTACATT  349
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCTGACTGCTGTCACTATCTTCTATGGCACCTTAAGCTTAAATTACATT  330

seq1  CAGCCAAGCTCCCAGTATTCTGTAGAACAAGAGAAGGTGGTGTCGGTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGCTCCCAGTATTCTGTAGAACAAGAGAAGGTGGTGTCGGTGTT  380

seq1  CTATACACTGGTGATTCCTATGTTAAATCCCATGATTTACAGTCTCAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACACTGGTGATTCCTATGTTAAATCCCATGATTTACAGTCTCAGGA  430

seq1  ACAAAGAGGTGAAAGAAGCTGCAAAGAGAGCCATAGAGATGAAGTCCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGGTGAAAGAAGCTGCAAAGAGAGCCATAGAGATGAAGTCCTTC  480

seq1  TCATGTTAATACCAGAGTAGCAAAATTTCTGTCCTATTTATCAGCCAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTAATACCAGAGTAGCAAAATTTCTGTCCTATTTATCAGCCAGCT  530

seq1  TTCATGCAGAAAGATGTACATTAAGTCAGTACATTCTAATTCTTTTGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAGAAAGATGTACATTAAGTCAGTACATTCTAATTCTTTTGTTT  580

seq1  AGAAGTTCTAATCTCAATATTTTTTAAGATGAAGAAACCCATGTGAAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCTAATCTCAATATTTTTTAAGATGAAGAAACCCATGTGAAAGT  630

seq1  CAAAAATTTGGTGTGTAATTTAATTTAAAAATTAACTTAAACGCTGTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTTGGTGTGTAATTTAATTTAAAAATTAACTTAAACGCTGTTTG  680

seq1  AAATATTATTATTTGAATTAATCAGTAAATAAAATATTAAATATATCTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATTATTTGAATTAATCAGTAAATAAAATATTAAATATATCTGC  730

seq1  TGTTTAAAAACTAAATAAATACAAGAGAACATTATGTCTTTTGGAGATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAACTAAATAAATACAAGAGAACATTATGTCTTTTGGAGATAA  780

seq1  ATAACAAGTTTTGTTATTAATGAGAACATCTATGATATTTATTGTATTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAGTTTTGTTATTAATGAGAACATCTATGATATTTATTGTATTGA  830

seq1  GTTTGTCTCTAAAATGTACTCTAAGTTTTAAATCATGGTGAAATTTTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTCTAAAATGTACTCTAAGTTTTAAATCATGGTGAAATTTTTGT  880

seq1  TTAATAAAGTACTTAAACATAATGGTATTATTTTACTTGACTATTCCACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAAGTACTTAAACATAATGGTATTATTTTACTTGACTATTCCACT  930

seq1  TTGTATTTATTAACATATTTTCTCTCTCTTTAGACATAAAAAGACTAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTATTAACATATTTTCTCTCTCTTTAGACATAAAAAGACTAAAA  980

seq1  AGCAAAAATAATTGCATAGAAATAAACAATACATTATTTCTGACATTCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATAATTGCATAGAAATAAACAATACATTATTTCTGACATTCCT  1030

seq1  ATAATAAATTTATATGTGTAAGGACAAAGCTGTACAGTAGGTACACTTAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATTTATATGTGTAAGGACAAAGCTGTACAGTAGGTACACTTAG  1080

seq1  ACACATTATTTTATCCTTTTCTATTTTTAAGAATTTCTTTCACATCCTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTATTTTATCCTTTTCTATTTTTAAGAATTTCTTTCACATCCTGA  1130

seq1  ATATAAACATACATTCAGAATTC  1172
      |||||||||||||||||||||||
seq2  ATATAAACATACATTCAGAATTC  1153