BAC Information

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BAC

Clone NameB6Ng01-024B03
Chromosome2 (Build37)
Map Location 32,334,255 - 32,472,770
singlet/doubletdoublet
Overlap geneC230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6
Upstream geneAss1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik
Downstream geneAk1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024B03.bB6Ng01-024B03.g
ACCDH855812DH855813
length607770
definitionDH855812|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B03, 5' end.DH855813|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,334,255 - 32,334,862)(32,472,041 - 32,472,770)
sequence
gaattctgtctctgtctcagagagccaattcttccatgttcttactccat
gctgttgaacaagatgcccagctgtccttcagtggggaggctgtgactca
ggactgaagccgagggcagatctcatagaccttctcactctgcttgcttc
gatcaccaatttttgaggctaccatagctaagcaacactcccattagctc
tgctctctgttgcaccctagccacggtcaccatggtaacagttgcagaag
tggctcttcaggaacttagaagcttgtctgtccacctcaaattagctgtt
agagctgcactgttgagagatgacctttcaccttcagaggacttgcctta
gtcagaggttctcttcctgcacgaacatcaggaacaagaagcaagctggg
gaggaaagggttcattcagcttacatgttcacattgctgttcatcaccaa
aggaagtcaggactggaactcacacagggcaggaagcatgagctggaaca
tgacccccttattctattaccagctttctgctttccaacttcctctaatc
ttggttgtgctagaacttgctctgtagattgacctttaactcagaggtct
gcatggc
gaattctttgggccctgactcccacccctagagctaaaaactaaaacaac
taaactaaacatctagaaagggaggcctgaggcccagacagtttcagcag
cgaactctacccaagacttaaagaaacaagctctgcacaatcgcacacac
aaaacagaagcagggcgctcttcaatgtgtgacgccgatgctcaaaccta
gaaagaacaactacagccaaaccagcccggggtgaaaccctagccagtgc
aatgggcaggagcaaggaaaagacagggattggggaggaagaaaggaaac
tgtatctacagagaacatgactattaatatgtgaaaaacatcacaaagaa
tctacaagtctaaaactagtgagtttaacagtcaacaaacaaaaaactca
tctttttttttttttttttttttttttttttacaaattccacacttccaa
tagactggggagggggctcagtgggtgacacactgtgcaagtgctacgtt
atcagactcccagtatccacccgagtcccaggtaggcacggtgcccatct
gtaattcaagtgctgagtgtggggacaaacaggatacctagaaaaactgg
cttgctagcctagccagagcagtgagctctgggttcaagggagagcgtct
gcctcagtatataaaacagagagtgattcaggaagacatctgacctcagc
ttgggcactctacacatacgtgtgcacatctgtacacatgcacactggga
cacaccccccacttacttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32334255_32334862
seq2: B6Ng01-024B03.b_36_643

seq1  GGAATTCTGTCTCTGTCTCAGAGAGCCAATTCTTCCATGTTCTTACTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTGTCTCTGTCTCAGAGAGCCAATTCTTCCATGTTCTTACTCCA  50

seq1  TGCTGTTGAACAAGATGCCCAGCTGTCCTTCAGTGGGGAGGCTGTGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGAACAAGATGCCCAGCTGTCCTTCAGTGGGGAGGCTGTGACTC  100

seq1  AGGACTGAAGCCGAGGGCAGATCTCATAGACCTTCTCACTCTGCTTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGAAGCCGAGGGCAGATCTCATAGACCTTCTCACTCTGCTTGCTT  150

seq1  CGATCACCAATTTTTGAGGCTACCATAGCTAAGCAACACTCCCATTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCACCAATTTTTGAGGCTACCATAGCTAAGCAACACTCCCATTAGCT  200

seq1  CTGCTCTCTGTTGCACCCTAGCCACGGTCACCATGGTAACAGTTGCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTGTTGCACCCTAGCCACGGTCACCATGGTAACAGTTGCAGAA  250

seq1  GTGGCTCTTCAGGAACTTAGAAGCTTGTCTGTCCACCTCAAATTAGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTTCAGGAACTTAGAAGCTTGTCTGTCCACCTCAAATTAGCTGT  300

seq1  TAGAGCTGCACTGTTGAGAGATGACCTTTCACCTTCAGAGGACTTGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGCACTGTTGAGAGATGACCTTTCACCTTCAGAGGACTTGCCTT  350

seq1  AGTCAGAGGTTCTCTTCCTGCACGAACATCAGGAACAAGAAGCAAGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGGTTCTCTTCCTGCACGAACATCAGGAACAAGAAGCAAGCTGG  400

seq1  GGAGGAAAGGGTTCATTCAGCTTACATGTTCACATTGCTGTTCATCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAGGGTTCATTCAGCTTACATGTTCACATTGCTGTTCATCACCA  450

seq1  AAGGAAGTCAGGACTGGAACTCACACAGGGCAGGAAGCAGGAGCTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGGAAGTCAGGACTGGAACTCACACAGGGCAGGAAGCATGAGCTGGAAC  500

seq1  ATGACCCCCTTATTCTATTACCAGCTTTCTGCTTTCCAACTTCCTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCCCTTATTCTATTACCAGCTTTCTGCTTTCCAACTTCCTCTAAT  550

seq1  CTTGGTTGTGCTAGAACTTGCTCTGTAGATTGACCTTAAACTCAGAGGTC  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTGGTTGTGCTAGAACTTGCTCTGTAGATTGACCTTTAACTCAGAGGTC  600

seq1  TGCATGGC  608
      ||||||||
seq2  TGCATGGC  608

seq1: chr2_32472041_32472770
seq2: B6Ng01-024B03.g_67_796 (reverse)

seq1  GATGTGCACACGTATGTGTAGAGTGCCCAAGCTGAGGTCAGATGTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCACACGTATGTGTAGAGTGCCCAAGCTGAGGTCAGATGTCTTCC  50

seq1  TGAATCACTCTCTGTTTTATATACTGAGGCAGACGCTCTCCCTTGAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACTCTCTGTTTTATATACTGAGGCAGACGCTCTCCCTTGAACCC  100

seq1  AGAGCTCACTGCTCTGGCTAGGCTAGCAAGCCAGTTTTTCTAGGTATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCACTGCTCTGGCTAGGCTAGCAAGCCAGTTTTTCTAGGTATCCT  150

seq1  GTTTGTCCCCACACTCAGCACTTGAATTACAGATGGGCACCGTGCCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCCCCACACTCAGCACTTGAATTACAGATGGGCACCGTGCCTACC  200

seq1  TGGGACTCGGGTGGATACTGGGAGTCTGATAACGTAGCACTTGCACAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCGGGTGGATACTGGGAGTCTGATAACGTAGCACTTGCACAGTG  250

seq1  TGTCACCCACTGAGCCCCCTCCCCAGTCTATTGGAAGTGTGGAATTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCCACTGAGCCCCCTCCCCAGTCTATTGGAAGTGTGGAATTTGTA  300

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAGTTTTTTGTTTGTTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAGTTTTTTGTTTGTTGAC  350

seq1  TGTTAAACTCACTAGTTTTAGACTTGTAGATTCTTTGTGATGTTTTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAACTCACTAGTTTTAGACTTGTAGATTCTTTGTGATGTTTTTCAC  400

seq1  ATATTAATAGTCATGTTCTCTGTAGATACAGTTTCCTTTCTTCCTCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATAGTCATGTTCTCTGTAGATACAGTTTCCTTTCTTCCTCCCCA  450

seq1  ATCCCTGTCTTTTCCTTGCTCCTGCCCATTGCACTGGCTAGGGTTTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTCTTTTCCTTGCTCCTGCCCATTGCACTGGCTAGGGTTTCACC  500

seq1  CCGGGCTGGTTTGGCTGTAGTTGTTCTTTCTAGGTTTGAGCATCGGCGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCTGGTTTGGCTGTAGTTGTTCTTTCTAGGTTTGAGCATCGGCGTC  550

seq1  ACACATTGAAGAGCGCCCTGCTTCTGTTTTGTGTGTGCGATTGTGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGAAGAGCGCCCTGCTTCTGTTTTGTGTGTGCGATTGTGCAGAG  600

seq1  CTTGTTTCTTTAAGTCTTGGGTAGAGTTCGCTGCTGAAACTGTCTGGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTTTAAGTCTTGGGTAGAGTTCGCTGCTGAAACTGTCTGGGCC  650

seq1  TCAGGCCTCCCTTTCTAGATGTTTAGTTTAGTTGTTTTAGTTTTTAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTCCCTTTCTAGATGTTTAGTTTAGTTGTTTTAGTTTTTAGCTC  700

seq1  TAGGGGTGGGAGTCAGGGCCCAAAGAATTC  730
      ||||||||||||||||||||||||||||||
seq2  TAGGGGTGGGAGTCAGGGCCCAAAGAATTC  730