BAC Information

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BAC

Clone NameB6Ng01-024D13
Chromosome2 (Build37)
Map Location 81,840,090 - 81,996,492
singlet/doubletdoublet
Overlap geneZfp804a
Upstream geneLOC100040655, LOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D13.bB6Ng01-024D13.g
ACCDH855924DH855925
length1,141980
definitionDH855924|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D13, 5' end.DH855925|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,995,330 - 81,996,492)(81,840,090 - 81,840,855)
sequence
gaattccatgtaattttaaactgtaaacttaaataatagagaggtttctg
cagttccacgttatttttaactaacaaccacattatacacaaaaatatct
cccttcttatcaaatgataggctgtcagaagcaaatttgttctctctctt
ttttctttctatcctatactttactcttctcggatacctacaaaacacat
tcaaaggcagctgtcagatacctccgtttgaatacagaaaatgaaattga
atacaagaaagggaatatattaccttagtattttaagacataaaactttt
ttttcagaaatatggtaattgaaacacttgtgcaggttgaacaatacaga
ctaaaaaatagggtagcttttatctctttacgcttattatcatgatgatt
gaaatgaatgtgcaaaactgcttgtctgtatagttaggagccatatctga
aactaaacaattaaaaagaaaggttatttctttcaaaatgatatgtaaat
tagtacttagcatttatgccaacagggctgtttttaaaaataacatacat
gcaactcattggtataaatcaatacctaaacttcaatttagattaaaggc
taaaatttagatttaatatgtgaatcctagttctaatatgtttattataa
gtaaggttgaaagccatattgattttttgtaattgtagaaattataaaag
agagattataagagagagagactaaatattcagatagtcaaaaaaatttc
aaattagtaatatatgtaaataagtatgaaaagtttcaattaacatttga
cttctaaaattaactattttatgtcaatggacaattatgacaaagtatac
agtattggctatttaacaaaatgcacaaataaatgcacaggagcattatt
tgtctattttgcctatgattttgaggtttacaatgatatactaatattta
tactttaatattcactactgtatttttaaaagttaacaaagcgtaaactt
tctctgcatatttctgagtttagccatcaacaattcatgaatgcatgaaa
catgagtcttggctaacaaatactgatttctaataatgggattatccgat
tcctccggacagagtccccctcacttctaggaggataaaaa
gaattcacatggccaaaggtataattaaatagtacccaaacacattttag
aaaagtgtatagaggacgtgagaggtattattattatttgtactactttt
acaaaggtaatttgttcacaaattataaaaagaagtcagcacaaaataac
tattaattatgagagaaggagtaattgtacattttcctgtagtattgcta
atcatgtacattaacatcagtatgattcccatgaggttaaaaaacataat
ttttaaagattggctatagagttccagggctaccacatactgtagtctgg
ctaggttaactaaaagaaatttagttttttcttggttctggagactgtaa
gtctaggttcagggtcagaattggtttatagagaggccttttattttatt
tatttatttattttttaggtaaccctgttatgtagcagtttattctgaaa
tggaaacattttatctttcagaaaagctcagtaaagcaataagtaaaaac
tcaaaatatctccaggaagtccctgaaattctgtaagtccctagcttcct
atgactacagagttagtaaagactgctaagagtacctctcagaaaaacca
agctacaaagaagactttcagactggagcagccactaagaagaagcagag
acaccgactaagctttgggaagaggctcatatcaactgagccacctggga
aaggatacctttcaagctgttgagccctctttggctgtgaagtgggaaag
cacttctgccatctcaagtgtggtgagcatggcatgctttgtcctccttc
ctgattccatctgccttgctataaaacatttgattacattcctaaatgct
aactcccaaggtcttttcccttatttggcaacttcttcctcctgaggttg
accaacaaagtccagctattaaactattgaagtccagcaatcaaacctct
tgttggctcactattaacatgcccattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81995330_81996492
seq2: B6Ng01-024D13.b_42_1182 (reverse)

seq1  TTTTCATCCTCCTAGAAGTAGAGCTGACTCTGTCTGGATGGAAATCTGAA  50
      |||| ||||||||||||||   |  ||||||||| |||  | |||| || 
seq2  TTTTTATCCTCCTAGAAGTGAGGGGGACTCTGTCCGGA--GGAATCGGA-  47

seq1  TAAATCACATTATTAGAGAATCCAGTATATTGTTTAGCCAAAGACTCATT  100
        |||| |||||||||| ||| |||||| ||| |||||| |||||||| |
seq2  -TAATCCCATTATTAGA-AAT-CAGTAT-TTG-TTAGCC-AAGACTCA-T  90

seq1  GTATCATGCAATCCATTGAATTGTTGATGGCTTAAACTCAGAAAATAATG  150
      || ||||||| ||   ||||||||||||||| ||||||||| |||||   
seq2  GTTTCATGCATTC--ATGAATTGTTGATGGC-TAAACTCAG-AAATA--T  134

seq1  GCAGAGGAAAGGTTTACGCTTTGTTAACTTTTTAAAAATACAGTAGTGAA  200
      ||||||  || ||||||||||||||||| |||||||||||||||||||||
seq2  GCAGAG--AAAGTTTACGCTTTGTTAAC-TTTTAAAAATACAGTAGTGAA  181

seq1  TATTAAAGTATAAATATTAGTATATCATTGTAAAACCTCAAAATCATAGG  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTAAAGTATAAATATTAGTATATCATTGT-AAACCTCAAAATCATAGG  230

seq1  CAAAAATAGACAAATAATTGCTCCTGTGCATTTATTTGTGCATTTTGTTA  300
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  C-AAAATAGACAAATAA-TGCTCCTGTGCATTTATTTGTGCATTTTGTTA  278

seq1  AATAGCCAATACTGTATACTTTGTCATAATTGTCCATTGACATAAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCAATACTGTATACTTTGTCATAATTGTCCATTGACATAAAATAG  328

seq1  TTAATTTTAGAAGTCAAATGTTAATTGAAACTTTTCATACTTATTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTAGAAGTCAAATGTTAATTGAAACTTTTCATACTTATTTACAT  378

seq1  ATATTACTAATTTGAAATTTTTTTGACTATCTGAATATTTAGTCTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTAATTTGAAATTTTTTTGACTATCTGAATATTTAGTCTCTCTC  428

seq1  TCTTATAATCTCTCTTTTATAATTTCTACAATTACAAAAAATCAATATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATCTCTCTTTTATAATTTCTACAATTACAAAAAATCAATATGG  478

seq1  CTTTCAACCTTACTTATAATAAACATATTAGAACTAGGATTCACATATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACCTTACTTATAATAAACATATTAGAACTAGGATTCACATATTA  528

seq1  AATCTAAATTTTAGCCTTTAATCTAAATTGAAGTTTAGGTATTGATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATTTTAGCCTTTAATCTAAATTGAAGTTTAGGTATTGATTTAT  578

seq1  ACCAATGAGTTGCATGTATGTTATTTTTAAAAACAGCCCTGTTGGCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGAGTTGCATGTATGTTATTTTTAAAAACAGCCCTGTTGGCATAA  628

seq1  ATGCTAAGTACTAATTTACATATCATTTTGAAAGAAATAACCTTTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGTACTAATTTACATATCATTTTGAAAGAAATAACCTTTCTTTT  678

seq1  TAATTGTTTAGTTTCAGATATGGCTCCTAACTATACAGACAAGCAGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTTTAGTTTCAGATATGGCTCCTAACTATACAGACAAGCAGTTTT  728

seq1  GCACATTCATTTCAATCATCATGATAATAAGCGTAAAGAGATAAAAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTCATTTCAATCATCATGATAATAAGCGTAAAGAGATAAAAGCTA  778

seq1  CCCTATTTTTTAGTCTGTATTGTTCAACCTGCACAAGTGTTTCAATTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTTTTTAGTCTGTATTGTTCAACCTGCACAAGTGTTTCAATTACC  828

seq1  ATATTTCTGAAAAAAAAGTTTTATGTCTTAAAATACTAAGGTAATATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTGAAAAAAAAGTTTTATGTCTTAAAATACTAAGGTAATATATT  878

seq1  CCCTTTCTTGTATTCAATTTCATTTTCTGTATTCAAACGGAGGTATCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTTGTATTCAATTTCATTTTCTGTATTCAAACGGAGGTATCTGA  928

seq1  CAGCTGCCTTTGAATGTGTTTTGTAGGTATCCGAGAAGAGTAAAGTATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCTTTGAATGTGTTTTGTAGGTATCCGAGAAGAGTAAAGTATAG  978

seq1  GATAGAAAGAAAAAAGAGAGAGAACAAATTTGCTTCTGACAGCCTATCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAAGAAAAAAGAGAGAGAACAAATTTGCTTCTGACAGCCTATCAT  1028

seq1  TTGATAAGAAGGGAGATATTTTTGTGTATAATGTGGTTGTTAGTTAAAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGAAGGGAGATATTTTTGTGTATAATGTGGTTGTTAGTTAAAAA  1078

seq1  TAACGTGGAACTGCAGAAACCTCTCTATTATTTAAGTTTACAGTTTAAAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTGGAACTGCAGAAACCTCTCTATTATTTAAGTTTACAGTTTAAAA  1128

seq1  TTACATGGAATTC  1163
      |||||||||||||
seq2  TTACATGGAATTC  1141

seq1: chr2_81840090_81840855
seq2: B6Ng01-024D13.g_68_834

seq1  GAATTCACATGGCCAAAGGTATAATTAAATAGTACCCAAACACATTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGGCCAAAGGTATAATTAAATAGTACCCAAACACATTTTAG  50

seq1  AAAAGTGTATAGAGGACGTGAGAGGTATTATTATTATTTGTACTACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTATAGAGGACGTGAGAGGTATTATTATTATTTGTACTACTTTT  100

seq1  ACAAAGGTAATTTGTTCACAAATTATAAAAAGAAGTCAGCACAAAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTAATTTGTTCACAAATTATAAAAAGAAGTCAGCACAAAATAAC  150

seq1  TATTAATTATGAGAGAAGGAGTAATTGTACATTTTCCTGTAGTATTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTATGAGAGAAGGAGTAATTGTACATTTTCCTGTAGTATTGCTA  200

seq1  ATCATGTACATTAACATCAGTATGATTCCCATGAGGTTAAAAAACATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTACATTAACATCAGTATGATTCCCATGAGGTTAAAAAACATAAT  250

seq1  TTTTAAAGATTGGCTATAGAGTTCCAGGGCTACCACATACTGTAGTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGATTGGCTATAGAGTTCCAGGGCTACCACATACTGTAGTCTGG  300

seq1  CTAGGTTAACTAAAAGAAATTTAGTTTTTTCTTGGTTCTGGAGACTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTAACTAAAAGAAATTTAGTTTTTTCTTGGTTCTGGAGACTGTAA  350

seq1  GTCTAGGTTCAGGGTCAGAATTGGTTTATAGAGAGGCCTTTTATTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGTTCAGGGTCAGAATTGGTTTATAGAGAGGCCTTTTATTTTATT  400

seq1  TATTTATTTATTTTTTAGGTAACCCTGTTATGTAGCAGTTTATTCTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTTTTAGGTAACCCTGTTATGTAGCAGTTTATTCTGAAA  450

seq1  TGGAAACATTTTATCTTTCAGAAAAGCTCAGTAAAGCAATAAGTAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACATTTTATCTTTCAGAAAAGCTCAGTAAAGCAATAAGTAAAAAC  500

seq1  TCAAAATATCTCCAGGAAGTCCCTGAAATTCTGTAAGTCCCTAGCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATCTCCAGGAAGTCCCTGAAATTCTGTAAGTCCCTAGCTTCCT  550

seq1  ATGACTACAGAGTTAGTAAAGACTGCTAAGAGTACCTCTCAGAAAAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTACAGAGTTAGTAAAGACTGCTAAGAGTACCTCTCAGAAAAACCA  600

seq1  AGCTACAAAGAAGACTTTCAGACTGGAGCAGCCACTAAGAAGAAGCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAAAGAAGACTTTCAGACTGGAGCAGCCACTAAGAAGAAGCAGAG  650

seq1  ACACCGACTAAGCTTTGGGAAGAGGCTCATATCAACTGAGCCACCT-GGA  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACACCGACTAAGCTTTGGGAAGAGGCTCATATCAACTGAGCCACCTGGGA  700

seq1  AAGGATACCTTTCAAGCTGTTGAGCCCTCTTTGGCTGTGAAGTGGGAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATACCTTTCAAGCTGTTGAGCCCTCTTTGGCTGTGAAGTGGGAAAG  750

seq1  CACTTCTGCCATCTCAA  766
      |||||||||||||||||
seq2  CACTTCTGCCATCTCAA  767