BAC Information

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BAC

Clone NameB6Ng01-024D20
Chromosome2 (Build37)
Map Location 16,635,477 - 16,636,538
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D20.g
ACCDH855938
length1,064
definitionDH855938|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgggttgggttgagaaatgaaacaaaatcctactccttgtgt
tgtgatgttaaatttttaatatggatagaaggttctgtcttagagtttct
attcctgcacaaacatcatgaccaagaagcaagttggggaggaaagggtt
tattcagcttacacttccatgctgctgttcatcaccaaggaagtcaggac
tggaactcaagcaggtcaggaagcaggagctgatgcagaggtcatggagg
gatgttccttactggcttgcttccactggcttgctctgcctgctctctta
tagaaccaagactaccagcccagggatggcaccacccacaagggggcctc
cccccttgatcactaattgagaaaatgccttacagctggatctcatggag
gcatttccccaactgaagctcctttctctgtgataactccagcctgtgtc
aagttgacacaaaactagccagaacaggtttaaaaacaaaaacagaaaag
gaatgaaaacaaacaagcaaacaggcaaacaaacacacaaagataactag
agtccatgggatgagtagaggtggggatctatgctatgtagaagactccc
tgtcagtaatggcttcataaaagcacttctcgttcacaatacaggtctct
taccatcaacctgaacataatgaatgcctgtttcacttatacccactgca
ttatctttcttttctaagataaattattatatttattaatgtttaaaata
aaagtttctttcctataaatttaactgcacactagtttccatttcatgtg
ttctgctgaaagcaggatgcatgaatgccccttgaatgcaatgacatcac
agtcagtatatgtcctatagattgttgttccaattttaatttagaattct
gtcatcgtttttggtttcctctagaaattcttgttccattaacctgccaa
gaaacctaaattgtgatctccttgggaatctcatggccatggtgggttat
cattttattccaatgaagccaaagttctatgggcctttaagcccagggaa
ggatctcacctttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16635477_16636538
seq2: B6Ng01-024D20.g_68_1131

seq1  GAATTCAGTGGGTTGGGTTGAGAAATGAAACAAAATCCTACTCCTTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGGTTGGGTTGAGAAATGAAACAAAATCCTACTCCTTGTGT  50

seq1  TGTGATGTTAAATTTTTAATATGGATAGAAGGTTCTGTCTTAGAGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTAAATTTTTAATATGGATAGAAGGTTCTGTCTTAGAGTTTCT  100

seq1  ATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTT  150

seq1  TATTCAGCTTACACTTCCATGCTGCTGTTCATCACCAAGGAAGTCAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCTTACACTTCCATGCTGCTGTTCATCACCAAGGAAGTCAGGAC  200

seq1  TGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGTCATGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGTCATGGAGG  250

seq1  GATGTTCCTTACTGGCTTGCTTCCACTGGCTTGCTCTGCCTGCTCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCTTACTGGCTTGCTTCCACTGGCTTGCTCTGCCTGCTCTCTTA  300

seq1  TAGAACCAAGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAAGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGGCCTC  350

seq1  CCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAG  400

seq1  GCATTTCCCCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCCCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCCTGTGTC  450

seq1  AAGTTGACACAAAACTAGCCAGAACAGGTTTAAAAACAAAAACAGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACACAAAACTAGCCAGAACAGGTTTAAAAACAAAAACAGAAAAG  500

seq1  GAATGAAAACAAACAAGCAAACAGGCAAACAAACACACAAAGATAACTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAACAAACAAGCAAACAGGCAAACAAACACACAAAGATAACTAG  550

seq1  AGTCCATGGGATGAGTAGAGGTGGGGATCTATGCTATGTAGAAGACTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGGGATGAGTAGAGGTGGGGATCTATGCTATGTAGAAGACTCCC  600

seq1  TGTCAGTAATGGCTTCATAAAAGCACTTCTCGTTCACAATACAGGTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTAATGGCTTCATAAAAGCACTTCTCGTTCACAATACAGGTCTCT  650

seq1  TACCATCAACCTGAACATAATGAATGCCTGTTTCACTTATACCCACTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCAACCTGAACATAATGAATGCCTGTTTCACTTATACCCACTGCA  700

seq1  TTATCTTTCTTTTCTAAGATAAATTATTATATTTATTAATGTTTAAAAAT  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATCTTTCTTTTCTAAGATAAATTATTATATTTATTAATGTTT-AAAAT  749

seq1  AAAAGTTTCTTTCCTATAAAATTAACTGCACACTAGTTTCCATTTCATGT  800
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAAGTTTCTTTCCTATAAATTTAACTGCACACTAGTTTCCATTTCATGT  799

seq1  GTTCTGCTGAAAGCAGGATGCATGAATGCCCCTTGAAATGCAATGACATC  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTCTGCTGAAAGCAGGATGCATGAATGCCCCTTG-AATGCAATGACATC  848

seq1  ACAGTCAGTATATGTCCTATAGATTG-TGTTCAAATTTTAATTTAGAATT  899
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  ACAGTCAGTATATGTCCTATAGATTGTTGTTCCAATTTTAATTTAGAATT  898

seq1  CTGTCATCGTTTTTGGTTT-CTCTAGAAATTCTTGTTCCATTAACCTGCA  948
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  CTGTCATCGTTTTTGGTTTCCTCTAGAAATTCTTGTTCCATTAACCTGCC  948

seq1  AAGAAAACCTAGATTGTGATCTC--TTGGAATC-CATGGCCAT-GTGGGT  994
      ||| ||||||| |||||||||||  | |||||| ||||||||| ||||||
seq2  AAG-AAACCTAAATTGTGATCTCCTTGGGAATCTCATGGCCATGGTGGGT  997

seq1  AATCATTTTATTCACATGAAGCAAAGTTTCTATTGGGCTTTAGAGCCCAG  1044
       ||||||||||||  ||||||| ||  |||||| || ||||| |||||||
seq2  TATCATTTTATTCCAATGAAGCCAAAGTTCTATGGGCCTTTA-AGCCCAG  1046

seq1  GGAAGAGTTCT-ACCTTTT  1062
      ||||| | ||| |||||||
seq2  GGAAG-GATCTCACCTTTT  1064