BAC Information

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BAC

Clone NameB6Ng01-024G09
Chromosome2 (Build37)
Map Location 116,643,558 - 116,762,190
singlet/doubletdoublet
Overlap geneTmco5
Upstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464
Downstream geneLOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024G09.bB6Ng01-024G09.g
ACCDH856045DH856046
length4451,042
definitionDH856045|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G09, 5' end.DH856046|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,761,745 - 116,762,190)(116,643,558 - 116,644,613)
sequence
gaattccacacttaatcaaatgtcagctatgtgacctgtgaccttggata
aggaacaacatgattactctgagatataatttttcttctttcttttttcc
ttctccccccctccccccctctctctcctcctcctcctcctctttgtcac
tgttgtccttctccttcttcccctctgccccacctcctcctctttctcct
tgttcttccttaagccaggaatgtggaagactacatgatccaaacgactt
ctgtaaccgacttgtcttggttgctgctttagttacgtttgtaagataca
aagctgtgcagtattttttcaggggtgaaagtaagggttgcgaaggtggg
aatgtgtgcacagaggttaatataattgtgtgtgtgatgctggttagtgc
aggaagctactacatactcaaagctgatacagctactgtccacgt
gaattcctcttctcatttggtaaggaactccctgattccgggcacttcct
tctttcactgaaactgggaagtcggattgtgagaacctccaagtgctgac
cccattcacgaaggaaacactgctgtcagtgtagcccgctgggcccagat
ctacacacacacacacccagtcccttatcccctttctactttgccgtttt
cgttttccagcttctactatgaactgtaaactcccaacagcacctcacag
ttctcctaaaaataatgatgcttttgaatgtgatcgttacataaacaaat
caaaaaagagcaaagtgacagtcttgagtcacttcgactaggtggcagat
aatgatccctcatcctctaaatatgtaattatttgaagtttggaggaaat
tgtactgtatactttgagggggtttttttccttatgtaaaattctgcctc
ttaacggtgatatttattaaaattccgctcatatttagatagagtgaaca
aatatgaaaccagtaatcctgcacaaggtttagtctgaacatgtgcctgt
ttgtatcttgaagttaaaaaaaaaaaaaactggtctaaattttcctaatg
aacctaattctgttatctggtcacttattaccatctcttgaggaaaattt
gaacgtataagataaccagaggatgaaggaggcttgttttgcacttgcct
atttagtgtacatgcctgctccatctgaactttccagtgagtttgggagg
tctgtcggtcacccagccaggctagttcaaaggaagcaagaagcccttgc
atccaaatgaaatctatatttggtgattcttaaatatcatttcccatggc
tttgtggggcatactgcttgctcaaataatgcacatgcctttccagtgag
acactttgtgaatgggagctagggtcactctgtgtcagcttacccactgc
ccacataggagagtaatgcagaccgaaccctgtcttgaaagcattttacc
atggggttgggggagagaacctttagactgtgctgaactttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116761745_116762190
seq2: B6Ng01-024G09.b_33_478 (reverse)

seq1  ACGTGGTCAGTAGCTGTATCAGCTTTGAGTCTGTAGTAGCTTCCTGCACT  50
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  ACGTGGACAGTAGCTGTATCAGCTTTGAGTATGTAGTAGCTTCCTGCACT  50

seq1  AACCAGCATCACACACACAATTATATTAACCTCTGTGCACACATTCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCATCACACACACAATTATATTAACCTCTGTGCACACATTCCCAC  100

seq1  CTTCGCAACCCTTACTTTCACCCCTGAAAAAATACTGCACAGCTTTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCAACCCTTACTTTCACCCCTGAAAAAATACTGCACAGCTTTGTAT  150

seq1  CTTACAAACGTAACTAAAGCAGCAACCAAGACAAGTCGGTTACAGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACGTAACTAAAGCAGCAACCAAGACAAGTCGGTTACAGAAGTC  200

seq1  GTTTGGATCATGTAGTCTTCCACATTCCTGGCTTAAGGAAGAACAAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATCATGTAGTCTTCCACATTCCTGGCTTAAGGAAGAACAAGGAG  250

seq1  AAAGAGGAGGAGGTGGGGCAGAGGGGAAGAAGGAGAAGGACAACAGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAGGAGGTGGGGCAGAGGGGAAGAAGGAGAAGGACAACAGTGAC  300

seq1  AAAGAGGAGGAGGAGGAGGAGAGAGAGGGGGGGAGGGGGGGAGAAGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAGGAGGAGGAGGAGAGAGAGGGGGGGAGGGGGGGAGAAGGAAA  350

seq1  AAAGAAAGAAGAAAAATTATATCTCAGAGTAATCATGTTGTTCCTTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAGAAAAATTATATCTCAGAGTAATCATGTTGTTCCTTATCC  400

seq1  AAGGTCACAGGTCACATAGCTGACATTTGATTAAGTGTGGAATTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACAGGTCACATAGCTGACATTTGATTAAGTGTGGAATTCC  446

seq1: chr2_116643558_116644613
seq2: B6Ng01-024G09.g_69_1110

seq1  GAATTCCTCTTCTCATTTGGTAAGGAACTCCCTGATTCCGGGCACTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTCTCATTTGGTAAGGAACTCCCTGATTCCGGGCACTTCCT  50

seq1  TCTTTCACTGAAACTGGGAAGTCGGATTGTGAGAACCTCCAAGTGCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTGAAACTGGGAAGTCGGATTGTGAGAACCTCCAAGTGCTGAC  100

seq1  CCCATTCACGAAGGAAACACTGCTGTCAGTGTAGCCCGCTGGGCCCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCACGAAGGAAACACTGCTGTCAGTGTAGCCCGCTGGGCCCAGAT  150

seq1  CTACACACACACACACCCAGTCCCTTATCCCCTTTCTACTTTGCCGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACACACACACACCCAGTCCCTTATCCCCTTTCTACTTTGCCGTTTT  200

seq1  CGTTTTCCAGCTTCTACTATGAACTGTAAACTCCCAACAGCACCTCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTCCAGCTTCTACTATGAACTGTAAACTCCCAACAGCACCTCACAG  250

seq1  TTCTCCTAAAAATAATGATGCTTTTGAATGTGATCGTTACATAAACAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTAAAAATAATGATGCTTTTGAATGTGATCGTTACATAAACAAAT  300

seq1  CAAAAAAGAGCAAAGTGACAGTCTTGAGTCACTTCGACTAGGTGGCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGAGCAAAGTGACAGTCTTGAGTCACTTCGACTAGGTGGCAGAT  350

seq1  AATGATCCCTCATCCTCTAAATATGTAATTATTTGAAGTTTGGAGGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCCTCATCCTCTAAATATGTAATTATTTGAAGTTTGGAGGAAAT  400

seq1  TGTACTGTATACTTTGAGGGGGTTTTTTTCCTTATGTAAAATTCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTATACTTTGAGGGGGTTTTTTTCCTTATGTAAAATTCTGCCTC  450

seq1  TTAACGGTGATATTTATTAAAATTCCGCTCATATTTAGATAGAGTGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGGTGATATTTATTAAAATTCCGCTCATATTTAGATAGAGTGAACA  500

seq1  AATATGAAACCAGTAATCCTGCACAAGGTTTAGTCTGAACATGTGCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAAACCAGTAATCCTGCACAAGGTTTAGTCTGAACATGTGCCTGT  550

seq1  TTGTATCTTGAAGTTAAAAAAAAAAAAAACTGGTCTAAATTTTCCTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTTGAAGTTAAAAAAAAAAAAAACTGGTCTAAATTTTCCTAATG  600

seq1  AACCTAATTCTGTTATCTGGTCACTTATTACCATCTCTTGAGGAAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAATTCTGTTATCTGGTCACTTATTACCATCTCTTGAGGAAAATTT  650

seq1  GAACGTATAAGATAACCAGAGGATGAAGGAGGCTTGTTTTGCACTTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTATAAGATAACCAGAGGATGAAGGAGGCTTGTTTTGCACTTGCCT  700

seq1  ATTTAGTGTACATGCCTGCTCCATCTGAACTTTCCAGTGGGTTTGGGAGG  750
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTAGTGTACATGCCTGCTCCATCTGAACTTTCCAGTGAGTTTGGGAGG  750

seq1  TCTGTCGGTCACCCAGCCAGGCTAGTTCAAAGGAAGCAAGAAGCCCTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCGGTCACCCAGCCAGGCTAGTTCAAAGGAAGCAAGAAGCCCTTGC  800

seq1  ATCCAAATGAAATCTATATTTGGTGATTCTTAAAATATCATTTCCCATGG  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCCAAATGAAATCTATATTTGGTGATTCTT-AAATATCATTTCCCATGG  849

seq1  CTTTGTGGGGCATACTGCTTGCTCAAATAATGCACATGCCTTTCCAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGGGCATACTGCTTGCTCAAATAATGCACATGCCTTTCCAGTGA  899

seq1  GACACTTTGTTGAAATGGGAGCTAGGGTCACTCTGTGTTCAGCTTACACA  950
      ||||||||||   |||||||||||||||||||||||| ||||||||| ||
seq2  GACACTTTGT--GAATGGGAGCTAGGGTCACTCTGTG-TCAGCTTACCCA  946

seq1  CTGCACACATAGGAAGAGTAATGCAGACAGAACCCTGTCGTTGAAAGCAT  1000
      |||| |||||||| |||||||||||||| |||||||||| ||||||||| 
seq2  CTGCCCACATAGG-AGAGTAATGCAGACCGAACCCTGTC-TTGAAAGCA-  993

seq1  TTTTACCAAGGGGGTTGGGGAGAGAAACCCTTTAAGCACTGGTGCTGAGC  1050
      |||||||| |||| | ||||||||||  ||||||   ||| |||||||  
seq2  TTTTACCATGGGGTTGGGGGAGAGAA--CCTTTA--GACT-GTGCTGA--  1036

seq1  ACTTTG  1056
      ||||||
seq2  ACTTTG  1042