BAC Information

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BAC

Clone NameB6Ng01-024H06
Chromosome2 (Build37)
Map Location 70,049,392 - 70,209,902
singlet/doubletdoublet
Overlap geneMyo3b
Upstream geneG6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650
Downstream geneLOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8, 4833418A01Rik, Cybrd1, Dync1i2, Slc25a12, LOC667528
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024H06.bB6Ng01-024H06.g
ACCDH856083DH856084
length1,0521,047
definitionDH856083|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H06, 5' end.DH856084|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,049,392 - 70,050,455)(70,208,849 - 70,209,902)
sequence
gaattccttcaaggctgcagcccgcttcatttttcttctggtgggttttc
ctatcatattcaaactgtctactgtggccttgtaaatctggggcctctca
ctgttcaggctataaatacaattttattatactttgctttgggtccctca
ccacagaaaaaacacatctaaacctactttttttttttaagagattaaaa
aagcacagcagtggaaggaagattttacctgggattttttagtttcccca
aagtcggcccatgctcaatcttattttttccttaagtaaaggattctgag
aagaactgacttgggccgagcagtgtcccagtttgagaaactgtcttcta
tggaagtaatagcttatgaatgtcccagatacagggacagttagggactt
gcggatcttgccttggtcttctatggggaggactcatctctgaccttgtt
ctaaaaacacagcacttatcagagtttacaacagaatttccaagatggta
tctgtggtgtgtggttcactgacagcagggacacagggaagaaaagaagg
aaaaaaaaagggtctatggccaagtaagcttggagacattgactcaaaca
aaattaagtcatttttaaaaattcttaatgctcattaaaaacaaaacaaa
acaaaacaacaaaaaaaaacacaacttctttaggggctggagagatggct
aagaggttaagagcactgactgctcttccaaaggtcctgagttcaattcc
ctgcacccacatggtggctcaataaccatctgtaacaggatctgatgtcc
tcttctggtgtgtctgaagagagcaagaatgtactcacatacctaaaaca
acaaacaaacaaacaacaaataaatattaaaacaattaactttatgtatt
caaatcatcatgaaaccctcaattactgtttaagaagatcactaatgttt
tccaaacttttttaccatgaagccatttctctttcttctttcagctctcc
cctctcccccttacagaatacaggcatgaatagcatttaccaacttacct
aa
gaattcaatctatataaacgttgtctaactcaagaagtagtgatcctaaa
agatcatgcttttatgaaggaatcctaaaccatcaagaaagaagatattt
gtgagggtttttttttttttcagtgtaattgaacaggcttatgtattcac
taaattaagttctgttgtgttaggcagccttctgtcattgcaacacatag
agagaacatcttgtgtattgcatggatgcatcacccatcaattaaaaacc
tatggcctataggaaaggatagaagagaaggtgggacatccgggagatag
aaagaattcgggacagagctagatatgggaggtgtcaccacggaaaatgt
gaggaggacagaggcgtggcacctgagcagagttaactaactgcaccgca
gaatgtaatttagcataagtgggttattttaaataattagctagtcaagg
aatgagcctagctatatggcctaggtacttgcaaatatatattctgagtc
agagtcattattccagtagctcaggtcaggagaaaaacagcctgtcatac
aatagtagcaaattacctgagatcattaatgcatgagaaagaaagattta
tttgggcttaccattctaaagattctagctcataatcagacaggcctggt
gctttgagccattggcaggcaaggttaacagcaaggtgagagcaagttat
gaaccaaatagcttatcccatgtccaagaggtaacagagtgagaggcctg
gggtcctaccgttacctacttactccactttctaaaggctccaccatgtt
ttttatttgtttttttttgtttgttttgttttggttttgttttaacagtg
ccactcttagggacccagcctgtaacacaaaagacattggagccattcat
tcaaactggtgacatccacctcattcctagcacacgcagacggtagtgtt
agcagaggctcgaggattgagactagaggagcttcatcgtctgcctctcc
ttgcaattggggctgctaggggatgctattgcgggaaactattactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_70049392_70050455
seq2: B6Ng01-024H06.b_45_1096

seq1  GAATTCCTTCAAGGCTGCAGCCCGCTTCATTTTTCTTCTGGTGGGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAAGGCTGCAGCCCGCTTCATTTTTCTTCTGGTGGGTTTTC  50

seq1  CTATCATATTCAAACTGTCTACTGTGGCCTTGTAAATCTGGGGCCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATATTCAAACTGTCTACTGTGGCCTTGTAAATCTGGGGCCTCTCA  100

seq1  CTGTTCAGGCTATAAATACAATTTTATTATACTTTGCTTTGGGTCCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGCTATAAATACAATTTTATTATACTTTGCTTTGGGTCCCTCA  150

seq1  CCACAGAAAAAACACATCTAAACCTACTTTTTTTTTTTAAGAGATTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAAAACACATCTAAACCTACTTTTTTTTTTTAAGAGATTAAAA  200

seq1  AAGCACAGCAGTGGAAGGAAGATTTTACCTGGGATTTTTTAGTTTCCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGCAGTGGAAGGAAGATTTTACCTGGGATTTTTTAGTTTCCCCA  250

seq1  AAGTCGGCCCATGCTCAATCTTATTTTTTCCTTAAGTAAAGGATTCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGCCCATGCTCAATCTTATTTTTTCCTTAAGTAAAGGATTCTGAG  300

seq1  AAGAACTGACTTGGGCCGAGCAGTGTCCCAGTTTGAGAAACTGTCTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGACTTGGGCCGAGCAGTGTCCCAGTTTGAGAAACTGTCTTCTA  350

seq1  TGGAAGTAATAGCTTATGAATGTCCCAGATACAGGGACAGTTAGGGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTAATAGCTTATGAATGTCCCAGATACAGGGACAGTTAGGGACTT  400

seq1  GCGGATCTTGCCTTGGTCTTCTATGGGGAGGACTCATCTCTGACCTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATCTTGCCTTGGTCTTCTATGGGGAGGACTCATCTCTGACCTTGTT  450

seq1  CTAAAAACACAGCACTTATCAGAGTTTACAACAGAATTTCCAAGATGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACACAGCACTTATCAGAGTTTACAACAGAATTTCCAAGATGGTA  500

seq1  TCTGTGGTGTGTGGTTCACTGACAGCAGGGACACAGGGAAGAAAAGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTGTGTGGTTCACTGACAGCAGGGACACAGGGAAGAAAAGAAGG  550

seq1  AAAAAAAAAGGGTCTATGGCCAAGTAAGCTTGGAGACATTGACTCAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGGGTCTATGGCCAAGTAAGCTTGGAGACATTGACTCAAACA  600

seq1  AAATTAAGTCATTTTTAAAAATTCTTAATGCTCATTAAAAACAAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGTCATTTTTAAAAATTCTTAATGCTCATTAAAAACAAAACAAA  650

seq1  ACAAAACAACAAAAAAAAACACAACTTCTTTAGGGGCTGGAGAGATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAACAAAAAAAAACACAACTTCTTTAGGGGCTGGAGAGATGGCT  700

seq1  AAGAGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCC  750

seq1  CTGCACCCACATGGTGGCTC-ATAACCATCTGTAACAGGATCTGATGTCC  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGCACCCACATGGTGGCTCAATAACCATCTGTAACAGGATCTGATGTCC  800

seq1  TCTTCTGGTGTGTCTGAAGAGAGCAAGAATGTACTCACATACCTAAAACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTTCTGGTGTGTCTGAAGAGAGCAAGAATGTACTCACATACCTAAAAC-  849

seq1  AACAAACAAACAAACAAACAAATAAATATTAAAACAAATAAACTTTAATG  899
      ||||||||||||||| ||||||||||||||||||| ||| |||||| |||
seq2  AACAAACAAACAAAC-AACAAATAAATATTAAAAC-AATTAACTTT-ATG  896

seq1  TATTCAAACACATCATGAAACCCCAAACTTACATGTTTTAGAAGATCACT  949
      ||||||||  |||||||||||||  || |||| ||||| |||||||||||
seq2  TATTCAAA-TCATCATGAAACCCTCAA-TTAC-TGTTTAAGAAGATCACT  943

seq1  AATGTTTCCCAAACTTTATTTACCAGGAAGCCATTTCTCTTTCTTCTTTC  999
      ||||||| ||||||||| ||||||| ||||||||||||||||||||||||
seq2  AATGTTTTCCAAACTTT-TTTACCATGAAGCCATTTCTCTTTCTTCTTTC  992

seq1  AGTCTCTCCCCCTCCCCCCTTAACAGAATACCAGCCATGACTAGCACTTT  1049
      || |||| |||||| |||| | |||||||| ||| ||||| ||||| |||
seq2  AG-CTCT-CCCCTCTCCCCCTTACAGAATA-CAGGCATGAATAGCA-TTT  1038

seq1  ACCCAACTTACCTAA  1064
      | |||||||||||||
seq2  A-CCAACTTACCTAA  1052

seq1: chr2_70208849_70209902
seq2: B6Ng01-024H06.g_69_1115 (reverse)

seq1  AAGTAAATAGTTTTCCCGCATATTAGCATTCCCCTAGCAGCCCCATTTGC  50
      |||| ||||| ||||||||  | ||||| |||||||||||||||| ||||
seq2  AAGT-AATAG-TTTCCCGC--AATAGCA-TCCCCTAGCAGCCCCAATTGC  45

seq1  AAGGGAGAGGCAGGACGATGAAGCTCCTCTAGTCTC-ATTCTCGAGCCTC  99
      || ||||||||| ||||||||||||||||||||||| || ||||||||||
seq2  AA-GGAGAGGCA-GACGATGAAGCTCCTCTAGTCTCAATCCTCGAGCCTC  93

seq1  TTGCTACCACTACCGTCTGCGTGGTGCTAGGAATGAAGGTGGATGTCA-C  148
       ||||| ||||||||||||||| |||||||||||| |||||||||||| |
seq2  -TGCTAACACTACCGTCTGCGT-GTGCTAGGAATG-AGGTGGATGTCACC  140

seq1  AGTTTGAATGAATGGCTCCAATGTCTTTTGTGTTACAGGCTGGGTCCCT-  197
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTTTGAATGAATGGCTCCAATGTCTTTTGTGTTACAGGCTGGGTCCCTA  190

seq1  AGAGTGGCACTGTTAAAAACAAAACAAAACAAAACAAACAAAAAAAAACA  247
      ||||||||||||||||||  ||| ||||||||||||||||||||||||||
seq2  AGAGTGGCACTGTTAAAACAAAACCAAAACAAAACAAACAAAAAAAAACA  240

seq1  AATAAAAAACATGGTGGAGCCTTTAGAAAGTGGAGTAAGTAGGTAACGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAACATGGTGGAGCCTTTAGAAAGTGGAGTAAGTAGGTAACGGT  290

seq1  AGGACCCCAGGCCTCTCACTCTGTTACCTCTTGGACATGGGATAAGCTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCCAGGCCTCTCACTCTGTTACCTCTTGGACATGGGATAAGCTAT  340

seq1  TTGGTTCATAACTTGCTCTCACCTTGCTGTTAACCTTGCCTGCCAATGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCATAACTTGCTCTCACCTTGCTGTTAACCTTGCCTGCCAATGGC  390

seq1  TCAAAGCACCAGGCCTGTCTGATTATGAGCTAGAATCTTTAGAATGGTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCACCAGGCCTGTCTGATTATGAGCTAGAATCTTTAGAATGGTAA  440

seq1  GCCCAAATAAATCTTTCTTTCTCATGCATTAATGATCTCAGGTAATTTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATAAATCTTTCTTTCTCATGCATTAATGATCTCAGGTAATTTGC  490

seq1  TACTATTGTATGACAGGCTGTTTTTCTCCTGACCTGAGCTACTGGAATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGTATGACAGGCTGTTTTTCTCCTGACCTGAGCTACTGGAATAA  540

seq1  TGACTCTGACTCAGAATATATATTTGCAAGTACCTAGGCCATATAGCTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGACTCAGAATATATATTTGCAAGTACCTAGGCCATATAGCTAG  590

seq1  GCTCATTCCTTGACTAGCTAATTATTTAAAATAACCCACTTATGCTAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCCTTGACTAGCTAATTATTTAAAATAACCCACTTATGCTAAAT  640

seq1  TACATTCTGCGGTGCAGTTAGTTAACTCTGCTCAGGTGCCACGCCTCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTGCGGTGCAGTTAGTTAACTCTGCTCAGGTGCCACGCCTCTGT  690

seq1  CCTCCTCACATTTTCCGTGGTGACACCTCCCATATCTAGCTCTGTCCCGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCACATTTTCCGTGGTGACACCTCCCATATCTAGCTCTGTCCCGA  740

seq1  ATTCTTTCTATCTCCCGGATGTCCCACCTTCTCTTCTATCCTTTCCTATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTATCTCCCGGATGTCCCACCTTCTCTTCTATCCTTTCCTATA  790

seq1  GGCCATAGGTTTTTAATTGATGGGTGATGCATCCATGCAATACACAAGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAGGTTTTTAATTGATGGGTGATGCATCCATGCAATACACAAGAT  840

seq1  GTTCTCTCTATGTGTTGCAATGACAGAAGGCTGCCTAACACAACAGAACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCTATGTGTTGCAATGACAGAAGGCTGCCTAACACAACAGAACT  890

seq1  TAATTTAGTGAATACATAAGCCTGTTCAATTACACTGAAAAAAAAAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGTGAATACATAAGCCTGTTCAATTACACTGAAAAAAAAAAAAA  940

seq1  CCCTCACAAATATCTTCTTTCTTGATGGTTTAGGATTCCTTCATAAAAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACAAATATCTTCTTTCTTGATGGTTTAGGATTCCTTCATAAAAGC  990

seq1  ATGATCTTTTAGGATCACTACTTCTTGAGTTAGACAACGTTTATATAGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTTTAGGATCACTACTTCTTGAGTTAGACAACGTTTATATAGAT  1040

seq1  TGAATTC  1054
      |||||||
seq2  TGAATTC  1047