BAC Information

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BAC

Clone NameB6Ng01-024I23
Chromosome2 (Build37)
Map Location 118,380,496 - 118,381,318
singlet/doubletsinglet
Overlap genenone
Upstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf
Downstream geneLOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024I23.bB6Ng01-024I23.g
ACCDH856154DH856155
length9351,099
definitionDH856154|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I23, 5' end.DH856155|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggccaaacatattccactttacttctgatagactgtcttgaa
tttccttagaaagttcaagatcagacttacctcgtaaagctgtactcact
ggtactctcgttccccagctgaaaagttctgaattcatacagttgaatcc
ttcttaacagtctgctttacgggaacctttattaccgcgacccgcagttc
tggttctggaatgagggatcttccttgcgccagtcccgagttttttctcg
tcccggaattcggcaccaattgttattagacgcgttctcacgaccggcca
ggaagaacaccacagaccagaatcttctgcggcaaagctttatttcttac
atcttcaggagcaagcgtgtaagaagcaagagagcaagaagcaagagaga
gagaaaacgaaaccccgtccctcttaaggagaattctccttcgcctcgga
cgtgtcactccctgattggctgcagcccatcggccgagttgacgtcacgg
ggaaggcagagcacaagtagtcataagatacccttggcacatgcgcagat
tatttgtttaccacttagaacacagctgtcagcgccatcttgtaacggcg
aatgtgggtgcggctcccaacaattattctctgaaaatataaagaaaatt
actggcaagttataaagacaatgacccccaggtgtgtgtttgtgtgagct
tgtttgtgcctatgcatgtgtatagaaaaaatgtgcacaaaacacatttt
ttttctgttctttatacatgatgtttttaaaaagaagaatgaatttatgt
attgcttttattttagtttgttgttgttgttggaggaaggttaagggatt
ttttttattattttattatttacttccaatgttgccccccttccaagtct
tccttctgatttcttcaccctattctcctcccctt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggaatgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatatataatttgctaaacacatgaaactcaagaagaa
tgaagactgaagtgtggacactatgcccctccttagatttgggaacaaaa
cacccatggaaggagttacagagacaaagtttggagctgagatgaaagga
tggaccatgtagagactgccatatccagggatccaccccatcatcagcat
ccaaacgctgacaccattgcatacactagcaagatttttttgaaaggacc
cagatgtagcagtctcttgtgagactatgccggggcctagcaaacacaga
agtggatgctcacagtcagctaatggatggatcatagggctcccatggag
agctagaagaaagtagccaaggagctaaggggatctgcacctatagggtg
gaacaacattatgaactaaccagtacccggagctcttgactctagctgca
tttataatcaaaagatggcctagtcggccatcctgggaagaaaaggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118380496_118381318
seq2: B6Ng01-024I23.b_49_673 (reverse)

seq1  AATAATTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCGTTGA  50
      ||||||||||||||||||| |||||||||||||| ||||||||||| |||
seq2  AATAATTGTTGGGAGCCGCACCCACATTCGCCGTTACAAGATGGCGCTGA  50

seq1  CATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGT  100
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGT  99

seq1  AT-TTACGACTACTTGTACTCTGCTTTTCCCATGAACGTCAGCTCGGCC-  148
      || ||| |||||||||| |||||| || ||| || |||||| ||||||| 
seq2  ATCTTATGACTACTTGTGCTCTGCCTTCCCCGTG-ACGTCAACTCGGCCG  148

seq1  ATGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAAGTGAAGGGTCACTC  198
      ||||||||||||||||||||||||||  ||||| | | ||| ||  | | 
seq2  ATGGGCTGCAGCCAATCAGGGAGTGACACGTCCGAGGCGAA-GGAGAATT  197

seq1  CTCCTTAAAGGGGACGGGGTTTTCCGCCACTCTCTCTCGCTGGCATCTCT  248
      ||||||||  ||||||||||||       |  | ||||       |||||
seq2  CTCCTTAAGAGGGACGGGGTTT-------CGTTTTCTC-------TCTCT  233

seq1  CTGGCTCTGCGCGCCCGGCGCTCGCTCGCTGCCTAAAGATGTAAACAATA  298
      || |||                  || |||                    
seq2  CTTGCT-----------------TCTTGCT--------------------  246

seq1  GAGCACGCTCTGCGCTTTGGCGCGCCGGAGCTCTGGCTCCTAAAAATATT  348
                                    |||| ||| || | |     
seq2  ------------------------------CTCTTGCTTCTTACA-----  261

seq1  GAGGGGCTTTCGTTTCTGGGGCTGGGCGCTGGGCACTTGCTCTCCTGGCT  398
                                       | ||||  ||||||   
seq2  ---------------------------------CGCTTG--CTCCTG---  273

seq1  CCCAAAGATGTTAGCAATAAAGTTTTGCCGCAGAAGATTTTGGTCTGTGG  448
          ||||||| || ||||||| |||||||||||||||| ||||||||||
seq2  ----AAGATGTAAGAAATAAAGCTTTGCCGCAGAAGATTCTGGTCTGTGG  319

seq1  TGTTCTTCCTGGCCGGTCGTGAGAACGCGTCTAATAACAATTGGTGCCGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCTGGCCGGTCGTGAGAACGCGTCTAATAACAATTGGTGCCGA  369

seq1  ATTCCGGGACGAGAAATTCCGGGACGAGAAAAAATCCGGGAAGAAAAAAC  548
      ||||||||||||||||                                  
seq2  ATTCCGGGACGAGAAA----------------------------------  385

seq1  CTGGGAGGAAACTCGGGACGGGAGTTTCACCGGCGCAGGGAAGATCCCTC  598
              |||||||||           || |||||| ||||||||||||
seq2  --------AAACTCGGG-----------ACTGGCGCAAGGAAGATCCCTC  416

seq1  ATTCCAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCA  466

seq1  GACTGTTAAGAAGGATTCAACTGCATGAATTCAGAACTTTTCAGCTGGGG  698
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GACTGTTAAGAAGGATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGG  516

seq1  AACGGCGGTAACCCGTAAGTATAGCTTTACGAGGTAAGCCTGGCCTTGAA  748
      ||||   || ||| || |||| |||||||||||||||| |||  ||||||
seq2  AACGAGAGT-ACCAGTGAGTACAGCTTTACGAGGTAAGTCTGATCTTGAA  565

seq1  CTTTCTAAGGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAAAATAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||      
seq2  CTTTCTAAGGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAA------  609

seq1  TTTATAAGGTATGTTTGGCCTTGAA  823
               ||||||||||||||||
seq2  ---------TATGTTTGGCCTTGAA  625