BAC Information

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BAC

Clone NameB6Ng01-025J12
Chromosome2 (Build37)
Map Location 142,776,625 - 142,777,119
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025J12.bB6Ng01-025J12.g
ACCDH856896DH856897
length1,188445
definitionDH856896|Mus musculus domesticus DNA, BAC clone: B6Ng01-025J12, 5' end.DH856897|Mus musculus domesticus DNA, BAC clone: B6Ng01-025J12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataacaacggtctgagaaacacctgaaaaaaag
ttcaacatcctgaatcatcagggaaatgtaaaccgaagcaaccttgatat
tgcatctcacaccagtcaaaatggcaaagatcacaaattcaaatgacaac
agaagctggcaaggatgtggacaaagaagaacacttctccattgttggtg
ggattgcaacctgatacaaccactttggaaatcagtctattggttcctca
caaaattggacatagtactaccagaagactcagcaatactacgtctgggc
aaatacacagaagatgttccaacttgcaataatgacacatgctccactat
gttcatagcagccttctttataacaggcagaagctggaaagaacccagat
gttcctcaaaagagaaattgatacaaaaaatgtggttcatgtacacaatg
gagcactactcagcaatgacaaacaatgaatttatgaaattcttaggcaa
atggatggatctggaggatatcatcctgattgtggaaacacaataacaaa
agaagacatatgatatgtactcactgataagaggacattagcccagtaac
ctagactaccgaagatacaatgtgcaaaccatataaaactcaagaaaagg
gaagatcaaaatgtggatacttcattccttcttagaatggggaacaaaat
acccatggaaggagttacagagacaaagttcagagctgagacagaagaaa
ggacagcccaagactgctccaaccggggatccataccatatacaaccaca
aaacctagacaatattgcatatgccagcaaggttttgctgacaggaccct
gatttagcatttcttgtgaggctatgccagtgcctggcaaatacagaaat
ggatgctcacattcatctattggatggaatacaaggcccctgaagaagag
ctagagaagtaaccaagaggtaaaggggtctgcaaccctatagcagatca
cagtatgactaacagtactccacagagctgtgactctagtgcatttgtag
ctgaggatggcttagtcgccatcggtggagggaagcccttggcttctgaa
atctgccattaaggaatgcagtccagtagcagatgatgttggggcaggcc
gggttgttaggacttctacgaatcattaatgtgctatg
tttgttcggttctgagccccattttttaatggggctcagaaatgatcaat
gaattccgcggatccttctatagtgtcacctaaatgtcgacggccaggcg
gccgccaggatatactaaagatcctttcccaatctgttggtggtcctttt
gtcttattgacggtgtcttttgccttgcagaaactttggagtttcattag
gtcccatttctcaattctcgatcttacggcacaagccattgctgttctgt
tcaggaattttttccctgtgcccatatcttcaaggcctttccccactttc
tcctctataagtttcagtgtctctggttttatgtgaagttccttgatcca
cttagatttgaccttagtacaaggagataagtatggatcgattcgcagta
accagtaccatgcagtttttatctcatttgctctgtagtatagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776625_142777119
seq2: B6Ng01-025J12.g_186_515 (reverse)

seq1  AGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCC  100
                                                        
seq2  --------------------------------------------------  0

seq1  ACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGA  150
                                       ||||| |    | ||||
seq2  ---------------------------------AGCTATA---CTACAGA  14

seq1  GGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTA  200
      | ||   ||| |  |  | ||     ||||         |||||||    
seq2  GCAAATGAGATAAAAACTGCA-----TGGT---------ACTGGTT----  46

seq1  TCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGT  250
                 | || ||||||||||||||||||||||||||||||||||
seq2  -----------ACTGCGAATCGATCCATACTTATCTCCTTGTACTAAGGT  85

seq1  CAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAAC  135

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAC  350
      ||||||||||||||||||||||| ||||||||||||||||||||||| | 
seq2  TTATAGAGGAGAAAGTGGGGAAAGGCCTTGAAGATATGGGCACAGGGAAA  185

seq1  AAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGA  400
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAATTCCTGAACAGAACAGCAATGGCTTGTGCCGTAAGATCGAGAATTGA  235

seq1  CAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCG  450
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCG  285

seq1  TCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTA  495
      |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAATAAGACAAAAGGACCACCAACAGATTGGGAAAGGATCTTTA  330