BAC Information

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BAC

Clone NameB6Ng01-027G04
Chromosome2 (Build37)
Map Location 111,506,805 - 111,544,836
singlet/doubletdoublet
Overlap geneOlfr1300-ps1
Upstream geneMuc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299
Downstream geneOlfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027G04.bB6Ng01-027G04.g
ACCDH858141DH858142
length943565
definitionDH858141|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G04, 5' end.DH858142|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,506,805 - 111,507,686)(111,544,266 - 111,544,836)
sequence
gaattctaataatattttaaatttgtgaatattcttaattcttataataa
gaaattctaagaataggaaatcagtacttgaaaaagtataataaaacaat
caaaaccttatctaaataattaatgtaaaaccacacaatttatcgaggac
aaactgatttgataaatttatatttacaaaaacttgaaccagaatatcac
actcctactccctaaaataatacaatatacaatatgttacatgatgatct
gcgctatgaaacaagtactacttttttaaaatcttacttttgagtggttc
atatatgtgtacaatgtaacctaatcgtatccatccatattatcttcatc
caattccccaagatttctttcagtatattttttgaagtggaaacttgagg
gttctttgaaagttggatggatggtgttttgctgaggcaaacacatgaag
gaaaatttagctgaagcagacacaggtgaaaggatgttctgctaaagcaa
gcatgtaaaaggacatttgatgaaggactctttgctaacaacacacatgt
attggtctgccttacattatgtagttgagctgcatttgtcaggattccat
agagagaaacacaccaaaaaacttctggtgatgtgctgtagtttcttgaa
gcttcctcccactcgggctgattggcagtggtgtcagttcatacaggtgt
acaatgtaacttaatcatatccacaggcaaatcctgtggaggacacgtga
tgtttggaggatataaataggactctactggctaaggctgagcttggctt
gcttatagagctagctgttcaatgcttgtgagtcttacgtcttcagtgat
cttcccaccactgtgagaggcatctcctggagttctccttgttccctcct
gctgactcatgctaaggctgaggcctgatatctgtgttaggtc
actacagctgggatcacctctaaacaccctgtgcatgactgtcaacattc
ctgcagcaggtttaagcagattcctgatcctgcctgaggattagcacaca
gcttgtttctggaggggggaagcaaaatggcccaaaggtaaaggcacctg
atgatgtcaactcagtccctgggatctaggtggtagagagaactgactgg
cacaagttgtcatcttggcaggggctgagcagatggcatagcagatgaag
gcatctgtacaaagattaatgaccttagtttcagtcccctggaagtagag
aactaacttctacaagttatcctctgacctacatatttgcaacaggacgc
atctccccttccaggaaaaaaaattgatttaaaaataaaatataaataac
aagcagactagagggacctgaagcaatgcatcccatgtcagaaaaaagaa
gtttcagaggagaaaacaaatgagaagaggacactggataaaacacaagc
cctgggggaatcctaggggccctaccctctcagaggacaggagagggggg
aggggatgaaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111506805_111507686
seq2: B6Ng01-027G04.b_45_926

seq1  GAATTCTAATAATATTTTAAATTTGTGAATATTCTTAATTCTTATAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATAATATTTTAAATTTGTGAATATTCTTAATTCTTATAATAA  50

seq1  GAAATTCTAAGAATAGGAAATCAGTACTTGAAAAAGTATAATAAAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTAAGAATAGGAAATCAGTACTTGAAAAAGTATAATAAAACAAT  100

seq1  CAAAACCTTATCTAAATAATTAATGTAAAACCACACAATTTATCGAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTTATCTAAATAATTAATGTAAAACCACACAATTTATCGAGGAC  150

seq1  AAACTGATTTGATAAATTTATATTTACAAAAACTTGAACCAGAATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATTTGATAAATTTATATTTACAAAAACTTGAACCAGAATATCAC  200

seq1  ACTCCTACTCCCTAAAATAATACAATATACAATATGTTACATGATGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTACTCCCTAAAATAATACAATATACAATATGTTACATGATGATCT  250

seq1  GCGCTATGAAACAAGTACTACTTTTTTAAAATCTTACTTTTGAGTGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTATGAAACAAGTACTACTTTTTTAAAATCTTACTTTTGAGTGGTTC  300

seq1  ATATATGTGTACAATGTAACCTAATCGTATCCATCCATATTATCTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTGTACAATGTAACCTAATCGTATCCATCCATATTATCTTCATC  350

seq1  CAATTCCCCAAGATTTCTTTCAGTATATTTTTTGAAGTGGAAACTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCCAAGATTTCTTTCAGTATATTTTTTGAAGTGGAAACTTGAGG  400

seq1  GTTCTTTGAAAGTTGGATGGATGGTGTTTTGCTGAGGCAAACACATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGAAAGTTGGATGGATGGTGTTTTGCTGAGGCAAACACATGAAG  450

seq1  GAAAATTTAGCTGAAGCAGACACAGGTGAAAGGATGTTCTGCTAAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTAGCTGAAGCAGACACAGGTGAAAGGATGTTCTGCTAAAGCAA  500

seq1  GCATGTAAAAGGACATTTGATGAAGGACTCTTTGCTAACAACACACATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAAAAGGACATTTGATGAAGGACTCTTTGCTAACAACACACATGT  550

seq1  ATTGGTCTGCCTTACATTATGTAGTTGAGCTGCATTTGTCAGGATTCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTGCCTTACATTATGTAGTTGAGCTGCATTTGTCAGGATTCCAT  600

seq1  AGAGAGAAACACACCAAAAAACTTCTGGTGATGTGCTGTAGTTTCTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAACACACCAAAAAACTTCTGGTGATGTGCTGTAGTTTCTTGAA  650

seq1  GCTTCCTCCCACTCGGGCTGATTGGCAGTGGTGTCAGTTCATACAGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCCCACTCGGGCTGATTGGCAGTGGTGTCAGTTCATACAGGTGT  700

seq1  ACAATGTAACTTAATCATATCCACAGGCAAATCCTGTGGAGGACACGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAACTTAATCATATCCACAGGCAAATCCTGTGGAGGACACGTGA  750

seq1  TGTTTGGAGGATATAAATAGGACTCTACTGGCTAAGGCTGAGCTTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGAGGATATAAATAGGACTCTACTGGCTAAGGCTGAGCTTGGCTT  800

seq1  GCTTATAGAGCTAGCTGTTCAATGCTTGTGAGTCTTACGTCTTCAGTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGAGCTAGCTGTTCAATGCTTGTGAGTCTTACGTCTTCAGTGAT  850

seq1  CTTCCCACCACTGTGAGAGGCATCTCCTGGAG  882
      ||||||||||||||||||||||||||||||||
seq2  CTTCCCACCACTGTGAGAGGCATCTCCTGGAG  882

seq1: chr2_111544266_111544836
seq2: B6Ng01-027G04.g_67_637 (reverse)

seq1  CCTCCTTCATCCCCTCCCCCCTCTCCTGTCCTCTGAGAGGGTAGGGCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCATCCCCTCCCCCCTCTCCTGTCCTCTGAGAGGGTAGGGCCCC  50

seq1  TAGGATTCCCCCAGGGCTTGTGTTTTATCCAGTGTCCTCTTCTCATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTCCCCCAGGGCTTGTGTTTTATCCAGTGTCCTCTTCTCATTTGT  100

seq1  TTTCTCCTCTGAAACTTCTTTTTTCTGACATGGGATGCATTGCTTCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTGAAACTTCTTTTTTCTGACATGGGATGCATTGCTTCAGGT  150

seq1  CCCTCTAGTCTGCTTGTTATTTATATTTTATTTTTAAATCAATTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAGTCTGCTTGTTATTTATATTTTATTTTTAAATCAATTTTTTTT  200

seq1  CCTGGAAGGGGAGATGCGTCCTGTTGCAAATATGTAGGTCAGAGGATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGGGGAGATGCGTCCTGTTGCAAATATGTAGGTCAGAGGATAAC  250

seq1  TTGTAGAAGTTAGTTCTCTACTTCCAGGGGACTGAAACTAAGGTCATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAGTTAGTTCTCTACTTCCAGGGGACTGAAACTAAGGTCATTAA  300

seq1  TCTTTGTACAGATGCCTTCATCTGCTATGCCATCTGCTCAGCCCCTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTACAGATGCCTTCATCTGCTATGCCATCTGCTCAGCCCCTGCCA  350

seq1  AGATGACAACTTGTGCCAGTCAGTTCTCTCTACCACCTAGATCCCAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACAACTTGTGCCAGTCAGTTCTCTCTACCACCTAGATCCCAGGGA  400

seq1  CTGAGTTGACATCATCAGGTGCCTTTACCTTTGGGCCATTTTGCTTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGACATCATCAGGTGCCTTTACCTTTGGGCCATTTTGCTTCCCC  450

seq1  CCTCCAGAAACAAGCTGTGTGCTAATCCTCAGGCAGGATCAGGAATCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGAAACAAGCTGTGTGCTAATCCTCAGGCAGGATCAGGAATCTGC  500

seq1  TTAAACCTGCTGCAGGAATGTTGACAGTCATGCACAGGGTGTTTAGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTGCTGCAGGAATGTTGACAGTCATGCACAGGGTGTTTAGAGGT  550

seq1  GATCCCAGCTGTAGTGAATTC  571
      |||||||||||||||||||||
seq2  GATCCCAGCTGTAGTGAATTC  571