BAC Information

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BAC

Clone NameB6Ng01-027G15
Chromosome2 (Build37)
Map Location 129,212,809 - 129,213,702
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896
Downstream geneF830045P16Rik, Sirpa, Pdyn, Ppia-ps2_1620.1, Stk35, Tgm3, AU015228, LOC100043438, Tgm6, Snrpb, Tmc2, Nol5a, Idh3b, Ebf4, LOC668899
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027G15.bB6Ng01-027G15.g
ACCDH858163DH858164
length890373
definitionDH858163|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G15, 5' end.DH858164|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttcagtgaccagagactccatctttctttcttacaaaccctgcccccaat
cccaacacctggttcctggagcctggagatgcttcctggatggaggtaca
cttttctgagaacactgaccttccatagcaagcaagtatagaagcctgtt
ctttacttgatctttctccctgtatctggccactgggctagtccatctga
ttggtgtcctttgtaaaagaattctgacaaatataaatgttcctgagttc
tgagtcttactaagcaatccattgtattttaaggggttgcgaggctcctt
caacttagagccagttgttaaaaatggtgaatgagcttcagacccgatgg
aggggcagtcttactgagagcatgcttttgaatgtgtgggatttatgcta
ttgtaactgtggatgctgaacggcagaactgaatcgaacccaacacaaga
gaggctgagacggatctctgcttctccgggactttaccgttcctgcttct
tactctattttaactctgtactcgactggcatgcgatttctcaccacacc
cacttacatcacacacaaaacaaacaaacaaaaacccaagcaaaacaaaa
gaccagaaacaacagagaaaccaaaaggaaggcacttccctgcatgtccc
tctcgtctctcagcccccaccgtccttgctctcagcacacttaatccaat
ccttctgatgaccattggcctcagtcagagctcactcggtgtggtgtaag
attggactctccagcagagtttatcatgaaccattttcatttcttcttat
accccgatcttcctgcctcagtctctgcaatgccaccgcacctctctgtg
ggcccttccttgcctgtctcctgcagagatcttctgctga
atgtctgcatggggtaaaagctgtgttctcttcacttctcctcacaaact
tatatctcttagagattcttggttactcctggtttagctccaggtcctcc
agctgatatggcaactcccattcacctggtttgttcacagctgaatcctg
ggtgaagggaccctctcactgtgagaactccactctgaaccctggattac
acacagaccacacccaaacacttaatttccaaagcacaaaccaaatgcaa
agagatcctttaatcagcaaggcaaagagacaagttggctgaatccgaat
caggcaaacacagcagcaaaaagctttgcaggtgttgattttaagagggg
gaaaggggaggtatgttagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_129212809_129213702
seq2: B6Ng01-027G15.b_38_927

seq1  TTCAGTGACCAGAGACTCCATCTGTCTTTCTTACAAACCCTGCCCCCAAT  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCAGTGACCAGAGACTCCATCTTTCTTTCTTACAAACCCTGCCCCCAAT  50

seq1  CCCAACACCTGGTTCCTGGAGCCTGGAGATGCTTCCTGGATGGAGGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACACCTGGTTCCTGGAGCCTGGAGATGCTTCCTGGATGGAGGTACA  100

seq1  CTTTTCTGAGAACACTGACCTTCCATAGCAAGCAAGTATAGAAGCCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGAGAACACTGACCTTCCATAGCAAGCAAGTATAGAAGCCTGTT  150

seq1  CTTTACTTGATCTTTCTCCCTGTATCTGGCCACTGGGCTAGTCCATCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTGATCTTTCTCCCTGTATCTGGCCACTGGGCTAGTCCATCTGA  200

seq1  TTGGTGTCCTTTGTAAAAGAATTCTGACAAATATAAATGTTCCTGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTCCTTTGTAAAAGAATTCTGACAAATATAAATGTTCCTGAGTTC  250

seq1  TGAGTCTTACTAAGCAATCCATTGTATTTTAAGGGGTTGCGAGGCTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTACTAAGCAATCCATTGTATTTTAAGGGGTTGCGAGGCTCCTT  300

seq1  CAACTTAGAGCCAGTTGTTAAAAATGGTGAATGAGCTTCAGACCCGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGAGCCAGTTGTTAAAAATGGTGAATGAGCTTCAGACCCGATGG  350

seq1  AGGGGCAGTCTTACTGAGAGCATGCTTTTGAATGTGTGGGATTTATGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGTCTTACTGAGAGCATGCTTTTGAATGTGTGGGATTTATGCTA  400

seq1  TTGTAACTGTGGATGCTGAACGGCAGAACTGAATCGAACCCAACACAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGTGGATGCTGAACGGCAGAACTGAATCGAACCCAACACAAGA  450

seq1  GAGGCTGAGACGGATCTCTGCTTCTCCGGGACTTTACCGTTCCTGCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAGACGGATCTCTGCTTCTCCGGGACTTTACCGTTCCTGCTTCT  500

seq1  TACTCTATTTTAACTCTGTACTCGACTGGCATGCGATTTCTCACCACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTATTTTAACTCTGTACTCGACTGGCATGCGATTTCTCACCACACC  550

seq1  CACTTACATCACACACAAAACAAACAAACAAAAACCCAAGCAAAACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACATCACACACAAAACAAACAAACAAAAACCCAAGCAAAACAAAA  600

seq1  GACCAGAAACAACAGAGAAACCAAAAGGAAGGCACTTCCCTGCATGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAAACAACAGAGAAACCAAAAGGAAGGCACTTCCCTGCATGTCCC  650

seq1  TCTCGTCTCTCAGCCCCCACCGTCCTTGCTCTCAGCACACTTAATCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTCTCTCAGCCCCCACCGTCCTTGCTCTCAGCACACTTAATCCAAT  700

seq1  CCTTCTGATGACCATTGGCCTCAGTCAGAGCTCACTCGGTGTGGTGTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGATGACCATTGGCCTCAGTCAGAGCTCACTCGGTGTGGTGTAAG  750

seq1  ATTGGACTCTCCAGCAGAGTTTTATCATGAACCATTTTCATTTCTTCTTA  800
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTGGACTCTCCAGCAGAG-TTTATCATGAACCATTTTCATTTCTTCTTA  799

seq1  TACCCCGATCTTTCCTGCCTCAGTCTCTGCAATGCCACCGCACCTCTCTG  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TACCCCGATC-TTCCTGCCTCAGTCTCTGCAATGCCACCGCACCTCTCTG  848

seq1  TGGGCCCTTCCTTGCCTGTCTCCTGCAGTAGTATCTTCTGCTGA  894
      |||||||||||||||||||||||||||| || ||||||||||||
seq2  TGGGCCCTTCCTTGCCTGTCTCCTGCAG-AG-ATCTTCTGCTGA  890