BAC Information

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BAC

Clone NameB6Ng01-027P08
Chromosome2 (Build37)
Map Location 94,565,330 - 94,566,140
singlet/doubletsinglet
Overlap genenone
Upstream geneExt2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5
Downstream geneLOC100043259, LOC100042843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027P08.bB6Ng01-027P08.g
ACCDH858564DH858565
length1,154812
definitionDH858564|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P08, 5' end.DH858565|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaggtccaaaattcaggtgacagc
agatgctggcgagaatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactacaggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcataccagccttatttataatagccagaagctgaaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aatgatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaagtttggagctgagataaa
aagatggaccatgtagagactgccatatccggggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattatgctgaaag
gaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaca
tagaagtggatgctcacagtcggctattggatggatcacatggccctatg
agagctagagaagtactctagagctaaagggatctgcaccctatagtgga
cacttatgactacagtacccggagcttctgactctagctgcatatgtatc
aagatggctagcggcctccctgggaaagagccattggacactcaactttt
aatgccccgttcagggacgccagggccataatgggatggggtgggtgagg
agat
tagcaatacacatgaagaagttgcacacttcatggtcttgatcctcctga
caccaggtctttttctcaacaggcttgtattatttgaaagttacattata
atcagaatatatggcatcaattatttcactagacaaatactatatatcca
ttgagaaatataggggtgtatgatgcagactgattggggtgccatttctt
aagcccaaccttaagtttgaagtcagagcataaagaatctgggtggtatt
tctaaacattctctacatatgttgtgtcgagagggtgctgtgcgtttatg
aaagcacctaaggtttggaacagtctttctcaactgcgtgacaaagtgaa
tctggcctccacaggacatttggaaatgtctggtgacagttttgtttctc
acatttaggggtggggaaaggtgggcatctagtgggaagagatccagaat
gctgctaagtgtccagtgtcacgctagatagcttgctcaaatgctatctg
cccaacacttcagcagtgtggaagcagataaaccgtgatctagagacagt
gacagaggatcttagaatttactgtctagcactggtgagttctccttact
cttaagcctgggaaggtaattggcagatttccagaatccagagagtggtt
gttggtaaggattatgaaaaagttgtcaaatcaggcagaaagaaatggca
ggggctcactatcttgatcatactttcttgatgctcttctgtcagtgact
aaccagagatcaagtgtgcccaccgatagaattcacataagcagatcttg
aaagaaacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94565330_94566140
seq2: B6Ng01-027P08.g_79_890

seq1  TAGCAATACACATGAAGAAGTTGCACACTTCATGGTCTTGATCCTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATACACATGAAGAAGTTGCACACTTCATGGTCTTGATCCTCCTGA  50

seq1  CACCAGGTCTTTTTCTCAACAGGCTTGTATTATTTGAAAGTTACATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGTCTTTTTCTCAACAGGCTTGTATTATTTGAAAGTTACATTATA  100

seq1  ATCAGAATATATGGCATCAATTATTTCACTAGACAAATACTATATATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATATATGGCATCAATTATTTCACTAGACAAATACTATATATCCA  150

seq1  TTGAGAAATATAGGGGTGTATGATGCAGACTGATTGGGGTGCCATTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAATATAGGGGTGTATGATGCAGACTGATTGGGGTGCCATTTCTT  200

seq1  AAGCCCAACCTTAAGTTTGAAGTCAGAGCATAAAGAATCTGGGTGGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAACCTTAAGTTTGAAGTCAGAGCATAAAGAATCTGGGTGGTATT  250

seq1  TCTAAACATTCTCTACATATGTTGTGTCGAGAGGGTGCTGTGCGTTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACATTCTCTACATATGTTGTGTCGAGAGGGTGCTGTGCGTTTATG  300

seq1  AAAGCACCTAAGGTTTGGAACAGTCTTTCTCAACTGCGTGACAAAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCTAAGGTTTGGAACAGTCTTTCTCAACTGCGTGACAAAGTGAA  350

seq1  TCTGGCCTCCACAGGACATTTGGAAATGTCTGGTGACAGTTTTGTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCTCCACAGGACATTTGGAAATGTCTGGTGACAGTTTTGTTTCTC  400

seq1  ACATTTAGGGGTGGGGAAAGGTGGGCATCTAGTGGGAAGAGATCCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGGGGTGGGGAAAGGTGGGCATCTAGTGGGAAGAGATCCAGAAT  450

seq1  GCTGCTAAGTGTCCAGTGTCACGCTAGATAGCTTGCTCAAATGCTATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAAGTGTCCAGTGTCACGCTAGATAGCTTGCTCAAATGCTATCTG  500

seq1  CCCAACACTTCAGCAGTGTGGAAGCAGATAAACCGTGATCTAGAGACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACACTTCAGCAGTGTGGAAGCAGATAAACCGTGATCTAGAGACAGT  550

seq1  GACAGAGGATCTTAGAATTTACTGTCTAGCACTGGTGAGTTCTCCTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGATCTTAGAATTTACTGTCTAGCACTGGTGAGTTCTCCTTACT  600

seq1  CTTAAGCCTGGGAAGGTAATTGGCAGATTTCCAGAATCCAGAGAGTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCCTGGGAAGGTAATTGGCAGATTTCCAGAATCCAGAGAGTGGTT  650

seq1  GTTGGTAAGGATTATG-AAAAGTTGTCAAATCAGGCAGAAAGAAATGGCA  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTGGTAAGGATTATGAAAAAGTTGTCAAATCAGGCAGAAAGAAATGGCA  700

seq1  GGGGCTCACTATCTTGATCATACTTTCTTGATGCTCTTCTGTCAGTGACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCACTATCTTGATCATACTTTCTTGATGCTCTTCTGTCAGTGACT  750

seq1  AACCAGAGATCAAGTGTGCCCACCGATAGAATTCACATAAGCAGATCTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGATCAAGTGTGCCCACCGATAGAATTCACATAAGCAGATCTTG  800

seq1  AAGGAAACAGTG  811
      || |||||||||
seq2  AAAGAAACAGTG  812