BAC Information

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BAC

Clone NameB6Ng01-028C07
Chromosome2 (Build37)
Map Location 111,879,837 - 111,880,047
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311
Downstream geneOlfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028C07.bB6Ng01-028C07.g
ACCDH858698DH858699
length933209
definitionDH858698|Mus musculus domesticus DNA, BAC clone: B6Ng01-028C07, 5' end.DH858699|Mus musculus domesticus DNA, BAC clone: B6Ng01-028C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgttttttaatggctgagtaacattccattgtgtaaatgtac
cacattttccatatccattcttctgctgagggacatctgggtactttcca
gcttctggttatcataaataaggatgctatgaacatagtggagcaagtgt
ccttattacatggagcatcttctgggtacatgcccaggattggtatagct
gggtcctccggtagtactatatctaattttttgaggaactgccagactga
tttccagagtggttgtaccagtttgcaatcccaccagcaatggaggagta
ttcctctttctccacatcctcgctagcatctgttgtcacctgagtttttg
accttagccattctgactggtgtgaggtggaatctcagggttgttttgat
ttacatttccctgatgattaaggatgtttcacatttctttaggtgcttct
tagccatttgatattctttagttaagaattcattgtttagctatgtacct
attttaaaaataaggttatttggttctcaggagtccaacttcttgagttg
tctcctgagaggctttgccagtgcctaatacatttagaggttgatgttct
cagacaaccattggactgagcacaaggtccccaatggaggagctagagaa
aggaccaaaggagctgaagaagtttgcatctccaaaggaggaacaacagt
atgaaccaaccagtacccccagatctcccaggggctaaaccatcaaccaa
agagtacacatggagggatccatgactccaactgcatatgtagcagagga
tggccttgttggacatcaatgggaggagaggcccttggtcctgagaaggc
tccatgcccagtgtaggggaatctcaagacagaggagcaggagtggatag
gttggtgagcaagggaagggtgatgggatagga
cagggcagggaagcaggagtgggtaggttagtgagcaggaggatagggga
tgggataggggagttttcccggggcaacggaaaaaatgatataacatttg
aaatgtaaataaataaaatatctaataaataacagaaagagattctcact
tatggccctcaaaagactgtggaaggttcatcaagtcctgtacatataat
gtggaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111879837_111880047
seq2: B6Ng01-028C07.g_72_280

seq1  CAGGGCAGGGAAGCAGGAGTGGGTAGGTTAGTGAGCAGGAGGATAGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAGGGAAGCAGGAGTGGGTAGGTTAGTGAGCAGGAGGATAGGGGA  50

seq1  TGGGATAGGGGAGTTTTCAGAGGGGAAACGGAAAAAAGGAGATAACATTT  100
      ||||||||||||||||||   |||| ||||||||||| || |||||||||
seq2  TGGGATAGGGGAGTTTTC-CCGGGGCAACGGAAAAAATGATATAACATTT  99

seq1  GAAATGTAAATAAATAAAATATCTAATAAAAAACAGAAAGAGATTCTCAC  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAATGTAAATAAATAAAATATCTAATAAATAACAGAAAGAGATTCTCAC  149

seq1  TTATGGCCCTCAAAAGACTGTGGAAGGTTCACCAAGTCCTGTACATAGAC  200
      ||||||||||||||||||||||||||||||| ||||||||||||||| | 
seq2  TTATGGCCCTCAAAAGACTGTGGAAGGTTCATCAAGTCCTGTACATATA-  198

seq1  CTGTGGAAAAG  211
       ||||||||||
seq2  ATGTGGAAAAG  209