BAC Information

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BAC

Clone NameB6Ng01-028E02
Chromosome2 (Build37)
Map Location 110,804,577 - 110,805,713
singlet/doubletsinglet
Overlap geneLOC668802
Upstream geneLgr4, Ccdc34, LOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028E02.bB6Ng01-028E02.g
ACCDH858784DH858785
length1,2821,122
definitionDH858784|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E02, 5' end.DH858785|Mus musculus domesticus DNA, BAC clone: B6Ng01-028E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgctagagtctcgcacatatgagttccatggttccttttctgaa
gatgcagggtcatgtgcccatcaaacaagaacagttacaatttaaaacta
tgtaaaaaccacaaagtaccaagaggtgctaaattaccatcatgctttag
aaaggccaatcagcagattcatctggaataacaaaaaacctaggagagca
aaaactcttctcaaggatcaaagaacctctggtggaatcaccatgccgga
cctaaagctgtactacagagcaattgtgataaaaactgcatggtattggt
atagtgacagacaagtagaccaatggaacagaattgaagacccagagatg
aacacacacacctatggtcacttgatctttgacaaggtagctaaaaccat
ccagtggaaaaaagacagcattttcaacaaatggtgctggcacaactggc
ggttatcatgtagaaaaatgcaaattgatccatttctatctccttgtact
aaggtcaaatctaagtggattaaggaactccacataaaaccagagacata
aaagtttcattatagaggagaaagtagggaaaagcctcgaagatatgggt
acaggggaaaaattcctgaatagaacagcaatagcttgtgctgtaaaatc
gagaatcgataaatgggacctcataaaattgcaaagcttctgcaaagcaa
aagacaccgtcaataagacaaaaaggccaccaacagattgggaaaggatc
tttacctatcccaaattggataggggactaatatccaatatatataaaga
actcaagaaggtgaactccagaaaatcaaataaccccattaaaaatgggg
ctcagagctgaacaaagaattctcacctgaggaataccgaatggctgaga
agcacctgaaaaatgatcaacatcattaatcatcagggaaattcaaatca
aacaaccctgagattccacttcactacaatcagaatggctaagatgaaaa
ttcaggtgacagcagatgctggcgaggatgttgagaaaggggaacactcc
tccattgttgttgggattgcaagcctgcaaattattatgccctcatttaa
tagctgaaaagatttcattatgtgatgaactacattctttatccatctct
catttgagggacatcttagttgtgtcagctttggtcttatcattatatag
cctgctttagagtgaacatgttctttgggatggtaagagatttggcataa
cccaaaaggtatataatgtgggtgctcacatg
gaattcctcataaaggcatgaaggacacatccctctaaagaaagtctcct
aacagaagaatgtgatggattaaataattataaagaatagaaagtacagt
agagtttgagaaacattttaatagaaacataaataaaattaatatacatg
taaaagatgaatggacagggaaccacttagtaagaggatatgtgtagagt
atagtgtatctctggtaatgaagggacatggtataataaagccttttcct
ctcaggattgctgggattgctcagagtgaaatgcagtgataggaacaaag
atagggagatgcaagcattctacagaaagataaaacatattgtagaaggt
ctgtgaaggaggggacatggagatggtgtgataaggctattaataagggg
aagaaaacttcactactaagaaaaaaaggaatggaatgttagtgtaatgg
gaaaactagaaaatagaagatagagtacaagaactgacagatctcaaagc
cacctcagctattgataatagaaggtattagtgctagaacttaatatcag
ggcggtcagggtcccgggtattttcaagagtttaaggaaaaatgagaaaa
ggggattctaagatggcctcaggtgagggaaatctaacttctgttggctc
aattggtaactcagtgtcaagagtcataatgacagtaattctaaaggcct
ggggatgctgtgacccaaggaacaaaagagaaaaaactgaaaatatgtcc
ataaaccatgagcttagtgagattataggaactgagtttccatttacatc
atacataaatactacatgatacatgaaacacacaagaatggaaataccta
agaaccaatttttcattttgtgctctttacataatgtggtataatacaca
ttctcttaaagaacaccttttgcctctcttttcaaaaggatctcagaatc
tttacactttcagcttgagagcatcttgggattctgtggatgctttggat
ctctaccttgcatgaagtactagtagtttcccgcagaccattggtctgat
gcaattgaaatgaggaaacttgcttttgcgaaaatacaatcagcctagaa
ttcacgagtagatggttctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110804577_110805713
seq2: B6Ng01-028E02.g_65_1186

seq1  GAATTCCTCATAAAGGCATGAAGGACACATCCCTCTAAAGAAAGTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATAAAGGCATGAAGGACACATCCCTCTAAAGAAAGTCTCCT  50

seq1  AACAGAAGAATGTGATGGATTAAATAATTATAAAGAATAGAAAGTACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGAATGTGATGGATTAAATAATTATAAAGAATAGAAAGTACAGT  100

seq1  AGAGTTTGAGAAACATTTTAATAGAAACATAAATAAAATTAATATACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGAGAAACATTTTAATAGAAACATAAATAAAATTAATATACATG  150

seq1  TAAAAGATGAATGGACAGGGAACCACTTAGTAAGAGGATATGTGTAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATGAATGGACAGGGAACCACTTAGTAAGAGGATATGTGTAGAGT  200

seq1  ATAGTGTATCTCTGGTAATGAAGGGACATGGTATAATAAAGCCTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTATCTCTGGTAATGAAGGGACATGGTATAATAAAGCCTTTTCCT  250

seq1  CTCAGGATTGCTGGGATTGCTCAGAGTGAAATGCAGTGATAGGAACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATTGCTGGGATTGCTCAGAGTGAAATGCAGTGATAGGAACAAAG  300

seq1  ATAGGGAGATGCAAGCATTCTACAGAAAGATAAAACATATTGTAGAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAGATGCAAGCATTCTACAGAAAGATAAAACATATTGTAGAAGGT  350

seq1  CTGTGAAGGAGGGGACATGGAGATGGTGTGATAAGGCTATTAATAAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGGAGGGGACATGGAGATGGTGTGATAAGGCTATTAATAAGGGG  400

seq1  AAGAAAACTTCACTACTAAGAAAAAAAGGAATGGAATGTTAGTGTAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACTTCACTACTAAGAAAAAAAGGAATGGAATGTTAGTGTAATGG  450

seq1  GAAAACTAGAAAATAGAAGATAGAGTACAAGAACTGACAGATCTCAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAGAAAATAGAAGATAGAGTACAAGAACTGACAGATCTCAAAGC  500

seq1  CACCTCAGCTATTGATAATAGAAGGTATTAGTGCTAGAACTTAATATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGCTATTGATAATAGAAGGTATTAGTGCTAGAACTTAATATCAG  550

seq1  GGCGGTCAGGGTCCCGGGTATTTTCAAGAGTTTAAGGAAAAATGAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGTCAGGGTCCCGGGTATTTTCAAGAGTTTAAGGAAAAATGAGAAAA  600

seq1  GGGGATTCTAAGATGGCCTCAGGTGAGGGAAATCTAACTTCTGTTGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTCTAAGATGGCCTCAGGTGAGGGAAATCTAACTTCTGTTGGCTC  650

seq1  AATTGGTAACTCAGTGTCAAGAGTCATAATGACAGTAATTCTAAAGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTAACTCAGTGTCAAGAGTCATAATGACAGTAATTCTAAAGGCCT  700

seq1  GGGGATGCTGTGACCCAAGGAACAAAAGAGAAAAAACTGAAAATATGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGCTGTGACCCAAGGAACAAAAGAGAAAAAACTGAAAATATGTCC  750

seq1  ATAAACCATGAGCTTAGTGAGATTATAGGAACTGAGTTTCCATTTACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCATGAGCTTAGTGAGATTATAGGAACTGAGTTTCCATTTACATC  800

seq1  ATACATAAATACTACATGATACATGAAACACACAAGAATGGAAATACCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAATACTACATGATACATGAAACACACAAGAATGGAAATACCTA  850

seq1  AGAACCAATTTTTCATTTTGTGCCCTTTACATAATGTGGTATAATACACA  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAACCAATTTTTCATTTTGTGCTCTTTACATAATGTGGTATAATACACA  900

seq1  TTCTCTTAAAGGAACACC-TTTGCCTCTCTTTTCAAAAGGATCTCAGAAT  949
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  TTCTCTTAAA-GAACACCTTTTGCCTCTCTTTTCAAAAGGATCTCAGAAT  949

seq1  CTTTACAACTTTCAGCTTGAGAGCATCTTGGGATTCTGTGGATGCTTTGA  999
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTTAC-ACTTTCAGCTTGAGAGCATCTTGGGATTCTGTGGATGCTTTGG  998

seq1  TTCTCCAACCTTGCAATGAAGTACTAGGTAGTTTCCCGCAGCACAATTTG  1049
       ||| | ||||||| ||||||||||| ||||||||||||||  ||  |||
seq2  ATCT-CTACCTTGC-ATGAAGTACTA-GTAGTTTCCCGCAGACCA--TTG  1043

seq1  GTCTGATGCAAATTGAAAATTGAGGAAACCTGGCCTTCTGGCAGAAATAT  1099
      ||||||||| ||||||||  ||||||||| ||  ||| | ||  ||||| 
seq2  GTCTGATGC-AATTGAAA--TGAGGAAACTTG--CTT-TTGCGAAAATA-  1086

seq1  CAATCATGCTATGATTCAGCCAGTAGATGGTTTCTGTT  1137
      ||||||  |||  ||||| | ||||||||| |||||||
seq2  CAATCAGCCTAGAATTCA-CGAGTAGATGG-TTCTGTT  1122