BAC Information

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BAC

Clone NameB6Ng01-028N06
Chromosome2 (Build37)
Map Location 111,544,337 - 111,545,459
singlet/doubletsinglet
Overlap genenone
Upstream geneMuc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1
Downstream geneOlfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028N06.bB6Ng01-028N06.g
ACCDH859203DH859204
length1,1511,113
definitionDH859203|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N06, 5' end.DH859204|Mus musculus domesticus DNA, BAC clone: B6Ng01-028N06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggtagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatggaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagtcggtacaacaattctggaaatcagtctggttgttcctca
gaaaattggacatagtaataccagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagtagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggaaacccaatcacaaa
ggaacccacacaatatgtactcactgataagtggatattagtccagaaac
ttaggatacccaagatataagatacaatttgctgaacgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaatgtttggagctgagatg
aaaggatggaccatctagagactgccatatccagggatccatcccataat
cagcttccaaacgctgacaccattgcacacactagcaagattttgctgaa
aggactcagatagagctctctcttgtgagactatgctggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcacaggccccca
atggtggagctagagaaagtaccaaggagctaaagggagctcaaccctat
agtgaacaacattatgaactaaccagtaccctgagctctgactctagctg
catatgtatctaaaatggctagtgcatcctgaagagagccatggactgca
acctttaattgccagtacagggatgcaggccataatgaatggtgctggca
t
gaattcaaacatgtccacaactaacaccttggtagattaagttttaaatt
taaaatttcatattctaaagacttattatttattatttttactttaaaat
atttaacattaatattttcttttaaagatttcctgatcctctctagctct
ctcaagactcctccagattcccatactgccactcttatttcctcctcctc
cttccatatccccaaatcattctgttcccccctccatgttagttgcagaa
acctttgaatcccagcactcagaaatcagaaacaggtgtatctctgtgag
atcgaggtcagtaagatctataatgtgagtccagaacaaccagggctaca
cacagagaaaccctaacttgaaaatgaaacaaagattttaatcttaaaaa
taatagactatgtcaacatctggtgttgggatgcagctcagtcttaggat
gcctgcctagagtgcagaccctggttttgatccattgagatgaaaacaca
gaatttaacggaagcgcctctatcttcttctccaaggctcagatagtctg
gaagacaaggaaggaagaacatgaatgccaggaaacagaggagagagctg
cataggctgtcttcagtactcctgaattcactacagctgggatcacctct
aaacaccctgtgcatgactgtcaacattcctgcagcaggtttaagcagat
tcctgatcctgcctgaggattagcacacagcttgtttctggaggggggaa
gcaaaatggcccaaaggtaaaggcacctgatgatgtcaactcagtccctg
ggatctaggtggtagagagaactgactggcacaagttgtcatcttggcag
gggctgagcagatggcatagcagatgaaggcatctgtacaaagattaatg
accttagtttcagttccctgggaagtagagaactaactttctacaagtta
tcctctgacctacaaattgcaacaggacgcatctccccttccaggaaaaa
aaatggatttaaaaataaaatataataacagcgactgagggacctgagca
tgcattccatgttcagaaaaaagagttcgaaggagaaacaatgaaagaga
cactggataaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111544337_111545459
seq2: B6Ng01-028N06.g_66_1178 (reverse)

seq1  GTTTTATCCAGTGTCCTCTTCTCATTTGTTTTCTCCTCTGAAACTTCTTT  50
      |||||||||||||| ||||| |||||   ||||||||  |||   |||||
seq2  GTTTTATCCAGTGT-CTCTT-TCATT--GTTTCTCCTTCGAA--CTCTTT  44

seq1  TTTCTG-ACATGGGATGCATTGCTTCAGGTCCCTCTAGTCTGCTTGTTAT  99
      |||||| |||||| ||||| ||| ||||||||||| |||| || ||||| 
seq2  TTTCTGAACATGGAATGCA-TGC-TCAGGTCCCTC-AGTC-GC-TGTTA-  88

seq1  TTATATTTTATTTTTAAATCAATTTTTTTTCCTGGAAGGGGAGATGCGTC  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTATATTTTATTTTTAAATCCATTTTTTTTCCTGGAAGGGGAGATGCGTC  138

seq1  CTGTTGCAAATATGTAGGTCAGAGGATAACTTGTAG-AAGTTAGTTCTCT  198
      ||||||| ||| |||||||||||||||||||||||| |||||||||||||
seq2  CTGTTGC-AATTTGTAGGTCAGAGGATAACTTGTAGAAAGTTAGTTCTCT  187

seq1  ACTT-CCAGGGGACTGAAACTAAGGTCATTAATCTTTGTACAGATGCCTT  247
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAGGGAACTGAAACTAAGGTCATTAATCTTTGTACAGATGCCTT  237

seq1  CATCTGCTATGCCATCTGCTCAGCCCCTGCCAAGATGACAACTTGTGCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTATGCCATCTGCTCAGCCCCTGCCAAGATGACAACTTGTGCCA  287

seq1  GTCAGTTCTCTCTACCACCTAGATCCCAGGGACTGAGTTGACATCATCAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTCTCTCTACCACCTAGATCCCAGGGACTGAGTTGACATCATCAG  337

seq1  GTGCCTTTACCTTTGGGCCATTTTGCTTCCCCCCTCCAGAAACAAGCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTACCTTTGGGCCATTTTGCTTCCCCCCTCCAGAAACAAGCTGT  387

seq1  GTGCTAATCCTCAGGCAGGATCAGGAATCTGCTTAAACCTGCTGCAGGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATCCTCAGGCAGGATCAGGAATCTGCTTAAACCTGCTGCAGGAA  437

seq1  TGTTGACAGTCATGCACAGGGTGTTTAGAGGTGATCCCAGCTGTAGTGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACAGTCATGCACAGGGTGTTTAGAGGTGATCCCAGCTGTAGTGAA  487

seq1  TTCAGGAGTACTGAAGACAGCCTATGCAGCTCTCTCCTCTGTTTCCTGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGTACTGAAGACAGCCTATGCAGCTCTCTCCTCTGTTTCCTGGC  537

seq1  ATTCATGTTCTTCCTTCCTTGTCTTCCAGACTATCTGAGCCTTGGAGAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTTCTTCCTTCCTTGTCTTCCAGACTATCTGAGCCTTGGAGAAG  587

seq1  AAGATAGAGGCGCTTCCGTTAAATTCTGTGTTTTCATCTCAATGGATCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAGGCGCTTCCGTTAAATTCTGTGTTTTCATCTCAATGGATCAA  637

seq1  AACCAGGGTCTGCACTCTAGGCAGGCATCCTAAGACTGAGCTGCATCCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGGTCTGCACTCTAGGCAGGCATCCTAAGACTGAGCTGCATCCCA  687

seq1  ACACCAGATGTTGACATAGTCTATTATTTTTAAGATTAAAATCTTTGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGATGTTGACATAGTCTATTATTTTTAAGATTAAAATCTTTGTTT  737

seq1  CATTTTCAAGTTAGGGTTTCTCTGTGTGTAGCCCTGGTTGTTCTGGACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAAGTTAGGGTTTCTCTGTGTGTAGCCCTGGTTGTTCTGGACTC  787

seq1  ACATTATAGATCTTACTGACCTCGATCTCACAGAGATACACCTGTTTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAGATCTTACTGACCTCGATCTCACAGAGATACACCTGTTTCTG  837

seq1  ATTTCTGAGTGCTGGGATTCAAAGGTTTCTGCAACTAACATGGAGGGGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTGCTGGGATTCAAAGGTTTCTGCAACTAACATGGAGGGGGG  887

seq1  AACAGAATGATTTGGGGATATGGAAGGAGGAGGAGGAAATAAGAGTGGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGATTTGGGGATATGGAAGGAGGAGGAGGAAATAAGAGTGGCA  937

seq1  GTATGGGAATCTGGAGGAGTCTTGAGAGAGCTAGAGAGGATCAGGAAATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGAATCTGGAGGAGTCTTGAGAGAGCTAGAGAGGATCAGGAAATC  987

seq1  TTTAAAAGAAAATATTAATGTTAAATATTTTAAAGTAAAAATAATAAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAAATATTAATGTTAAATATTTTAAAGTAAAAATAATAAATA  1037

seq1  ATAAGTCTTTAGAATATGAAATTTTAAATTTAAAACTTAATCTACCAAGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTTTAGAATATGAAATTTTAAATTTAAAACTTAATCTACCAAGG  1087

seq1  TGTTAGTTGTGGACATGTTTGAATTC  1123
      ||||||||||||||||||||||||||
seq2  TGTTAGTTGTGGACATGTTTGAATTC  1113