BAC Information

Click to search

BAC

Clone NameB6Ng01-028P24
Chromosome2 (Build37)12 (Build37)
Map Location 142,776,686 - 142,777,698105,066,742 - 105,067,717
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P24.bB6Ng01-028P24.g
ACCDH859324DH859325
length952983
definitionDH859324|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P24, 5' end.DH859325|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,686 - 142,777,698)(105,066,742 - 105,067,717)
sequence
gaattctttgttcaattctgagccccatttttaatggggttatttgattt
tctggagtccaccctcttcagttctttataattattggatattagtctcc
tacctgatttaggattggtaaagaccctttcacaatcggttgatggtctt
tttgtcttactgaaagtatcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcgattctcgatcttatagcacaagccattgctgttc
tagtcaggaatttttcccctatgccaatatcttccaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtggagttcattgat
ccacttagatttgaccttattataaggagataagaatggatcgatttgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
gccataggtgtgtgggttcatttctgggtcttcaattcttttccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagcattaggtcagggatggtgattccaccagaggttctttt
atccttgagaaaagtttttgctatcttaggttttttgttattccagatta
atttgcagattgctctttctaattcattgaagaatttagttggtatttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
ataatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttcttaaatttctttcttcagagacttgaagttcttatcatacc
acatttttttgtatccattcctctgtgaggggcatctgtgttcttttcag
ct
gaattctttgtttcctgtgcaggagaatggactctgactgacaggaaatt
cctgacaggctggtgcacagtggccaggggacaggctagggggcaaagaa
tagctctgtaaggaagagctgggctgcccttagacaggttaattgacctc
tctgaaccagagacatttccagaatggcagattggtagccatcatggttg
ctaagggtacaggaagcttgagtaaaacatgtgcattgtaagtcgtttgt
ctcagtctaagaagttctttccagccttcccatctcccaccctcccctcc
tttgacctgggcaagttccacattgattccaggaagctggtatggggact
ttctttctagatggggactttccttagggatggggagactaggaaggggc
agtctctctgctccgggacacggagagggtggtcacagctcttgaaggtc
tgtctggtttggttggaggaggtcagggttgaggcaaatgggctctgtac
tctgatcctcttcaaaatctcgatcatatcccatcagccctgtgatgggc
acaggtggtgagttcacattcccacccccacaatccccactcctccatgg
ttccagctctcctgctctcctggcccttggccgagcacagcaagaatgag
gtggatgagtgatggtcacatttccaccttctgccagtcactggctcccc
tgtgatccaccttaggactcagcctaatagatgttccacagggtcctaca
gcgcctgagattagacctcaacccatcagacaaatattttcacctcctgg
tgacgccctgtctccacctctaagatgcagattatgatggcacaaagctg
ctgcaagaactacattacagcaagggaaactcggagcctagggctcaagg
tatccagacagctatttgggggtgattgctcttatcaattactggggctc
acttgtcccactggggtgggggggtggagttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776686_142777698
seq2: B6Ng01-028P24.b_45_596 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGACCAATGGAAAAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGAC  100
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGAC  100

seq1  AGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150

seq1  AATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      ||||  ||||||||||| ||||||||||| || |||||||||||||||||
seq2  AATGCAAATCGATCCATTCTTATCTCCTTATAATAAGGTCAAATCTAAGT  200

seq1  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      ||||||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  GGATCAATGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAA  300
      ||||||||||||||||| |||||||| |||| |||||| |||||||||| 
seq2  AAAGTGGGGAAAAGCCTGGAAGATATTGGCATAGGGGAAAAATTCCTGAC  300

seq1  CAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACC  350
       ||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  TAGAACAGCAATGGCTTGTGCTATAAGATCGAGAATCGACAAATGGGACC  350

seq1  TAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
      | |||||||| ||||| ||||||||||||||||| ||  ||| |||||||
seq2  TCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGATACTTTCAGTAAGACA  400

seq1  AAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  450
      ||||||||| |||| ||||| |||||| |||||||| |||||||||||| 
seq2  AAAAGACCATCAACCGATTGTGAAAGGGTCTTTACCAATCCTAAATCAGG  450

seq1  TAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCA  500
      |||| ||||||||||||| |  ||||||||||| |||| |||||||| ||
seq2  TAGGAGACTAATATCCAATAATTATAAAGAACTGAAGAGGGTGGACTCCA  500

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTG  550
      |||||||||||||||||||| |||||||||||||| ||          | 
seq2  GAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAA----------TT  539

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  600
      ||| |||||   |                                     
seq2  GAACAAAGAATTC-------------------------------------  552

seq1  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  650
                                                        
seq2  --------------------------------------------------  552

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  700
                                                        
seq2  --------------------------------------------------  552

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  750
                                                        
seq2  --------------------------------------------------  552

seq1  AATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  800
                                                        
seq2  --------------------------------------------------  552

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGT  850
                                                        
seq2  --------------------------------------------------  552

seq1  CTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATC  900
                                                        
seq2  --------------------------------------------------  552

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  950
                                                        
seq2  --------------------------------------------------  552

seq1  GTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACT  1000
                                                        
seq2  --------------------------------------------------  552

seq1  GAACAAAGAATTC  1013
                   
seq2  -------------  552

seq1: chr12_105066742_105067717
seq2: B6Ng01-028P24.g_67_1049

seq1  GAATTCTTTGTTTCCTGTGCAGGAGAATGGACTCTGACTGACAGGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTCCTGTGCAGGAGAATGGACTCTGACTGACAGGAAATT  50

seq1  CCTGACAGGCTGGTGCACAGTGGCCAGGGGACAGGCTAGGGGGCAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAGGCTGGTGCACAGTGGCCAGGGGACAGGCTAGGGGGCAAAGAA  100

seq1  TAGCTCTGTAAGGAAGAGCTGGGCTGCCCTTAGACAGGTTAATTGACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGTAAGGAAGAGCTGGGCTGCCCTTAGACAGGTTAATTGACCTC  150

seq1  TCTGAACCAGAGACATTTCCAGAATGGCAGATTGGTAGCCATCATGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACCAGAGACATTTCCAGAATGGCAGATTGGTAGCCATCATGGTTG  200

seq1  CTAAGGGTACAGGAAGCTTGAGTAAAACATGTGCATTGTAAGTCGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGTACAGGAAGCTTGAGTAAAACATGTGCATTGTAAGTCGTTTGT  250

seq1  CTCAGTCTAAGAAGTTCTTTCCAGCCTTCCCATCTCCCACCCTCCCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCTAAGAAGTTCTTTCCAGCCTTCCCATCTCCCACCCTCCCCTCC  300

seq1  TTTGACCTGGGCAAGTTCCACATTGATTCCAGGAAGCTGGTATGGGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTGGGCAAGTTCCACATTGATTCCAGGAAGCTGGTATGGGGACT  350

seq1  TTCTTTCTAGATGGGGACTTTCCTTAGGGATGGGGAGACTAGGAAGGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTAGATGGGGACTTTCCTTAGGGATGGGGAGACTAGGAAGGGGC  400

seq1  AGTCTCTCTGCTCCGGGACACGGAGAGGGTGGTCACAGCTCTTGAAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCTGCTCCGGGACACGGAGAGGGTGGTCACAGCTCTTGAAGGTC  450

seq1  TGTCTGGTTTGGTTGGAGGAGGTCAGGGTTGAGGCAAATGGGCTCTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTTTGGTTGGAGGAGGTCAGGGTTGAGGCAAATGGGCTCTGTAC  500

seq1  TCTGATCCTCTTCAAAATCTCGATCATATCCCATCAGCCCTGTGATGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCTCTTCAAAATCTCGATCATATCCCATCAGCCCTGTGATGGGC  550

seq1  ACAGGTGGTGAGTTCACATTCCCACCCCCACAATCCCCACTCCTCCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGGTGAGTTCACATTCCCACCCCCACAATCCCCACTCCTCCATGG  600

seq1  TTCCAGCTCTCCTGCTCTCCTGGCCCTTGGCCGAGCACAGCAAGAATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTCTCCTGCTCTCCTGGCCCTTGGCCGAGCACAGCAAGAATGAG  650

seq1  GTGGATGAGTGATGGTCACATTTCCACCTTCTGCCAGTCACTGGCTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAGTGATGGTCACATTTCCACCTTCTGCCAGTCACTGGCTCCCC  700

seq1  TGTGATCCACCTTAGGACTCAGCCTAATAGATGTTCCACAGGGTCCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCACCTTAGGACTCAGCCTAATAGATGTTCCACAGGGTCCTACA  750

seq1  GCGCCTGAGATTAGACCTCAACCCATCAGACAAATATTTTCACCTCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGAGATTAGACCTCAACCCATCAGACAAATATTTTCACCTCCTGG  800

seq1  TGACGCCCTGTCTCCACCTCTAAGATGCAGATTATGATGGCACAAAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCCCTGTCTCCACCTCTAAGATGCAGATTATGATGGCACAAAGCTG  850

seq1  CTGCAAGAACTACA-TACAGCAAGGGAAACTCGGAGCCTAGGGCTCAAGG  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAACTACATTACAGCAAGGGAAACTCGGAGCCTAGGGCTCAAGG  900

seq1  TATCCAGACAGCTATTT-GGGGTGA-TGCTCTTATCAA-TACTGGGGCTC  946
      ||||||||||||||||| ||||||| |||||||||||| |||||||||||
seq2  TATCCAGACAGCTATTTGGGGGTGATTGCTCTTATCAATTACTGGGGCTC  950

seq1  ACTTGTCCCACTGG---GTGGGGGTGGAGTTAT  976
      ||||||||||||||   | ||||||||||||||
seq2  ACTTGTCCCACTGGGGTGGGGGGGTGGAGTTAT  983