BAC Information

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BAC

Clone NameB6Ng01-029J21
Chromosome2 (Build37)
Map Location 17,109,732 - 17,110,820
singlet/doubletsinglet
Overlap genenone
Upstream genePlxdc2, 4930515L03Rik, LOC383665
Downstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029J21.bB6Ng01-029J21.g
ACCDH859770DH859771
length1,2451,084
definitionDH859770|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J21, 5' end.DH859771|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaattcttaattagcaccacagcagccttataataggatgtta
aaactttgaggtgaagaaggatgattttacattaatgtttatttttgcca
aaaaaatagctgtggacacatttaataaaaataactagaatatgtaacta
atatttgattaccactacttacaattgatactaatagattacagaagttt
cttctactttctgttaaagcctttttggttctcaccagttaattggaatc
tcacttgaaagcacctaacaaaggcttagatcctcctgtggcgagtttaa
ggtgaggtcttagccaattaacatatcctgtaagcttttggaaataaaat
tttgaagtaaatttgtaccaattttccagtatgactgaaaccctaattat
taaaaaagatattgcctctgaatcttatgaagcaacaactattctctaga
actttaaacttccctttagagacattagctaataaaatacttttcactta
ggaaacaatatatactgaaagatttaaaccttttgcttcttgtattgaag
ctgataataaaattttttttacatattgttaagctatgttagccatacct
aggggcaaaaacctttaatggtcaccagttcactagaagtaaattcttaa
gtgccacataagccccgctgaggctgctcctctctgagctcagccttaac
ccaaacgcaaacttttctcaatctgaacactctgccagagtcttggctca
aagaatatccctatgttgaagtatccttaaagacctgttttcttgtgttt
gttcatgttgtttagaaagactctaaccttgagttcccagatttaagcta
actttctgttacaagcaaaaggctgcctgcccctttaagagctccatttg
taatcggctctcagcaagctttttcagctgtacttgactcccagccacag
tgcagctaatttatcagcttgtacttgtgcaaattgaactgcttttagga
cagttttaccatttatattttcacaggaacatagaacataccattcaaca
acataacaaaacaccgatgaagaatatagacatttgtttgtgcacaaacg
aacatgacggacagaatgaactgggttcagaaacgatattaacagagcta
agaatccatgagcgagacgacttccattttcttgtcggacctgagcatgc
attctggtctctccgcatgcagctggctaggcatactgatgaatg
gaattccatttaaatttctcctgtgattaaagaagaaaatttaaaacacc
agtgatttcccctttccttatcaaattaagagctggactatagctcaatc
agtaaagtgcctaccatgccagcataaggatctgagtttgattccctaga
ccccaagtaaaatgaacagcatggtgacatctgcatgtaatgccaatgtt
gagaaggcttcctgaggctcattcaccagccactctagtatacttggtga
gatttatgggaatgagagattttgcctcaaacaacaaggcagtggtgact
gaggcatagctcctaaggctgtcttctgggttccatatgtctgtacacat
acattcacatccatgcctacaggtacattcacatacacacacagacagag
acacgcagacacgcagacacacagacacacagacacacagacacacacac
acacacatacacacacacacagacaaagagacagagagacagagtgacaa
agacagagagaaagacagagagaaattcaccaatgaacacagaaaaaaat
taaaattatgaactgtctcctttaagtactgatgagcagcttttatgtac
agaatcctgtcttggccaattactggaagaagtgagatgcagacagatga
ttggttacacagcatctaccctgtatggaccactcagatccaaggctgtg
agttgaacacatgcttgtaagatatttaccaattctcattgcttaagtct
actccaaggcaccttcattagtctttgagtacattaaagatgtgaaacgt
cctgaactaaaattatttagcatgtacttgaatttaaaactgcaaggcat
ggaatgaacagtgttagaaatccttataagcgagtataagtcacattgca
gagaggctgccatgtgctttaatcctgtgttgaccaaacagagggtgttt
ctttcaaagcattacttcatgatagcatattgctgctatcaattacaaca
gactgctgcttttacagcatggaatatacatcaaagaggtgtgcatcttc
atggagcacctgcagtgagtaagtgagctatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17109732_17110820
seq2: B6Ng01-029J21.g_66_1149 (reverse)

seq1  TGCATAAGCTCACTTTACCTCACTGCAGGTGCTCCATGAAGATGCACACC  50
      ||||| |||||||||   ||||||||||||||||||||||||||||||||
seq2  TGCAT-AGCTCACTT--ACTCACTGCAGGTGCTCCATGAAGATGCACACC  47

seq1  TCTTTGATGTATATTCCATGCTGTAAAAAGCAGCAGTCTGTTTGTAATTG  100
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  TCTTTGATGTATATTCCATGCTGT-AAAAGCAGCAGTCTG-TTGTAATTG  95

seq1  ATAGCAGCAATATGCTATCATGAAGTAATGCTTTGAAAGAAACACCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGCAATATGCTATCATGAAGTAATGCTTTGAAAGAAACACCCTCT  145

seq1  GTTTGGTCAACACAGGATTAAAGCACATGGCAGCCTCTCTGCAATGTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCAACACAGGATTAAAGCACATGGCAGCCTCTCTGCAATGTGAC  195

seq1  TTATACTCGCTTATAAGGATTTCTAACACTGTTCATTCCATGCCTTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTCGCTTATAAGGATTTCTAACACTGTTCATTCCATGCCTTGCAG  245

seq1  TTTTAAATTCAAGTACATGCTAAATAATTTTAGTTCAGGACGTTTCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTCAAGTACATGCTAAATAATTTTAGTTCAGGACGTTTCACAT  295

seq1  CTTTAATGTACTCAAAGACTAATGAAGGTGCCTTGGAGTAGACTTAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGTACTCAAAGACTAATGAAGGTGCCTTGGAGTAGACTTAAGCA  345

seq1  ATGAGAATTGGTAAATATCTTACAAGCATGTGTTCAACTCACAGCCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATTGGTAAATATCTTACAAGCATGTGTTCAACTCACAGCCTTGG  395

seq1  ATCTGAGTGGTCCATACAGGGTAGATGCTGTGTAACCAATCATCTGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTGGTCCATACAGGGTAGATGCTGTGTAACCAATCATCTGTCTG  445

seq1  CATCTCACTTCTTCCAGTAATTGGCCAAGACAGGATTCTGTACATAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACTTCTTCCAGTAATTGGCCAAGACAGGATTCTGTACATAAAAG  495

seq1  CTGCTCATCAGTACTTAAAGGAGACAGTTCATAATTTTAATTTTTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATCAGTACTTAAAGGAGACAGTTCATAATTTTAATTTTTTTCTG  545

seq1  TGTTCATTGGTGAATTTCTCTCTGTCTTTCTCTCTGTCTTTGTCACTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTGGTGAATTTCTCTCTGTCTTTCTCTCTGTCTTTGTCACTCTG  595

seq1  TCTCTCTGTCTCTTTGTCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTCTCTTTGTCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTC  645

seq1  TGTGTGTCTGTGTGTCTGTGTGTCTGCGTGTCTGCGTGTCTCTGTCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTGTGTGTCTGTGTGTCTGCGTGTCTGCGTGTCTCTGTCTGTG  695

seq1  TGTGTATGTGAATGTACCTGTAGGCATGGATGTGAATGTATGTGTACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGAATGTACCTGTAGGCATGGATGTGAATGTATGTGTACAGA  745

seq1  CATATGGAACCCAGAAGACAGCCTTAGGAGCTATGCCTCAGTCACCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGAACCCAGAAGACAGCCTTAGGAGCTATGCCTCAGTCACCACTG  795

seq1  CCTTGTTGTTTGAGGCAAAATCTCTCATTCCCATAAATCTCACCAAGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTGTTTGAGGCAAAATCTCTCATTCCCATAAATCTCACCAAGTAT  845

seq1  ACTAGAGTGGCTGGTGAATGAGCCTCAGGAAGCCTTCTCAACATTGGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGTGGCTGGTGAATGAGCCTCAGGAAGCCTTCTCAACATTGGCAT  895

seq1  TACATGCAGATGTCACCATGCTGTTCATTTTACTTGGGGTCTAGGGAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCAGATGTCACCATGCTGTTCATTTTACTTGGGGTCTAGGGAATC  945

seq1  AAACTCAGATCCTTATGCTGGCATGGTAGGCACTTTACTGATTGAGCTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGATCCTTATGCTGGCATGGTAGGCACTTTACTGATTGAGCTAT  995

seq1  AGTCCAGCTCTTAATTTGATAAGGAAAGGGGAAATCACTGGTGTTTTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGCTCTTAATTTGATAAGGAAAGGGGAAATCACTGGTGTTTTAAA  1045

seq1  TTTTCTTCTTTAATCACAGGAGAAATTTAAATGGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTTAATCACAGGAGAAATTTAAATGGAATTC  1084