BAC Information

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BAC

Clone NameB6Ng01-029L06
Chromosome2 (Build37)
Map Location 60,127,114 - 60,304,254
singlet/doubletdoublet
Overlap geneLy75, LOC100039176, Pla2r1
Upstream genePkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861
Downstream geneItgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029L06.bB6Ng01-029L06.g
ACCDH859829DH859830
length1,0111,098
definitionDH859829|Mus musculus domesticus DNA, BAC clone: B6Ng01-029L06, 5' end.DH859830|Mus musculus domesticus DNA, BAC clone: B6Ng01-029L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,127,114 - 60,128,133)(60,303,133 - 60,304,254)
sequence
gaattctctctgtacaccaggctaacctcgaactccagagattcacctgg
attaaaggaatgtgccaccatcacccaggcccctcctgtcttctgagacc
atggatttgccctggtcatggatgtttgtaattcaaccacttaaggaaca
gaaggataagaggtttgccacaggaggataacccttggccacagtagtaa
tatcctgtccaaataaaccaagggcagggtgctgtaggtcagtggtaacg
gaatctgtgtagtatgctcaagaaagtccctggattctgtcctcatcatc
acagaaacaaacccttactttccatctcttttggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaaggaaggctcaaagcttctat
gggccagccttttccctctatggtctatctctactagatacaactttctc
agaatatacttctctgaatatttccatacttccactgtatttctcaaaat
ctcacatttcctatttctaaattctttctttttggctcacttcctgggaa
ctttgacctcattctgccgatggatttctactggctgggctcacccatgg
tttcccaattgctactgtctgagctctctgtggtttcataaacaccaact
tgaggctctgttctagtaaaaggttccttggccagggaatcaacctgacc
taggactgattatcaatctacattaggttcagggaggaaatgaccaagac
ctgaactaagacagtcagtgactggcaatagccctccttgtcagagtctg
ggtaaaactgagaacatcgttggactgggaagagaatgacaaggattgga
gggcgacttctggatttctagtttggagccaaaatgatgcctacttcata
ttaactacatacatgaactgccatgcttccaccatgatgataatagacta
agctctaaaactaaagccatctcgatgaatgtttccttataagaatttgc
tgtggatctct
gaattcctgcaccaggtcatcaggaagccccaggttttcctttgatggga
agaaatgtaatctctacactaatctggccataagggggctcactgtgagt
ttgttcttgtttatcagctatttccttggacaggtctgggaaatgtgttg
cctgtgtgtttgcttgcactgcacatgtgaggatgagatttttttttcaa
acccataatttcggtttcaattcaggaccacagatttattgcttaatttg
ccttttatctgtattttcttttatgccacaatccttaagtctctcaacac
caggaaactctgacattctccttttttaaaaaacagcaaaaggactctcc
agccttagcattttgagagaagtagaacattccttaaaccatgaaagcta
gttttgaaccacactagccattgctactgattaaagagagagagagaata
atgcatagaaacagaaatgttctttgatctgagagaacagatccagttag
taaagagagccctgcaggggcaaacaggaggtcgtctcctcgtaaggtgg
cacaaagcttctctagggtaagtgtgtgcctcagatgtgtcccaacagat
taaaagaaggcctgaaatcactatttcatggcattctgtaacttcagctc
tgcatcaggaccattccttgatcagtcatgtaggaccatccagggtacct
gggcactagttcttccaaatcagttgaaacctgccagttaagggcaactg
gaccccagcaaagccagacagacttgtatccttcaaggtgcccttcacag
tgcaagggctaggaaacccatcacattgataaaccatggtcagcatggtc
aggtttaaggctcctctgggttttgaatgaaatgccacatactgggtatg
tgctcagccttgtttctgagcacatttgcagttgcttcatagccaagcaa
agtaccagtgatagcgttcttcaaggatctgtggcatacagagagaatca
tgctggtgaggtactagaagtgggtgtacacaggacgtgacctaggcaga
ggagcctattctcactagctttctaagactgacaaagcagctaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60127114_60128133
seq2: B6Ng01-029L06.b_46_1056

seq1  GAATTCTCTCTGTACACCAGGCTAACCTCGAACTCCAGAGATTCACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTACACCAGGCTAACCTCGAACTCCAGAGATTCACCTGG  50

seq1  ATTAAAGGAATGTGCCACCATCACCCAGGCCCCTCCTGTCTTCTGAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGAATGTGCCACCATCACCCAGGCCCCTCCTGTCTTCTGAGACC  100

seq1  ATGGATTTGCCCTGGTCATGGATGTTTGTAATTCAACCACTTAAGGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTGCCCTGGTCATGGATGTTTGTAATTCAACCACTTAAGGAACA  150

seq1  GAAGGATAAGAGGTTTGCCACAGGAGGATAACCCTTGGCCACAGTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATAAGAGGTTTGCCACAGGAGGATAACCCTTGGCCACAGTAGTAA  200

seq1  TATCCTGTCCAAATAAACCAAGGGCAGGGTGCTGTAGGTCAGTGGTAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTCCAAATAAACCAAGGGCAGGGTGCTGTAGGTCAGTGGTAACG  250

seq1  GAATCTGTGTAGTATGCTCAAGAAAGTCCCTGGATTCTGTCCTCATCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTGTAGTATGCTCAAGAAAGTCCCTGGATTCTGTCCTCATCATC  300

seq1  ACAGAAACAAACCCTTACTTTCCATCTCTTTTGGAAGGAAGGAAGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACAAACCCTTACTTTCCATCTCTTTTGGAAGGAAGGAAGGAAGG  350

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGCTCAAAGCTTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGCTCAAAGCTTCTAT  400

seq1  GGGCCAGCCTTTTCCCTCTATGGTCTATCTCTACTAGATACAACTTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCCTTTTCCCTCTATGGTCTATCTCTACTAGATACAACTTTCTC  450

seq1  AGAATATACTTCTCTGAATATTTCCATACTTCCACTGTATTTCTCAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATACTTCTCTGAATATTTCCATACTTCCACTGTATTTCTCAAAAT  500

seq1  CTCACATTTCCTATTTCTAAATTCTTTCTTTTTGGCTCACTTCCTGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATTTCCTATTTCTAAATTCTTTCTTTTTGGCTCACTTCCTGGGAA  550

seq1  CTTTGACCTCATTCTGCCGATGGATTTCTACTGGCTGGGCTCACCCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCTCATTCTGCCGATGGATTTCTACTGGCTGGGCTCACCCATGG  600

seq1  TTTCCCAATTGCTACTGTCTGAGCTCTCTGTGGTTTCATAAACACCAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATTGCTACTGTCTGAGCTCTCTGTGGTTTCATAAACACCAACT  650

seq1  TGAGGCTCTGTTCTAGTAAAAGGTTCCTTGGCCAGGGAATCAACCTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCTGTTCTAGTAAAAGGTTCCTTGGCCAGGGAATCAACCTGACC  700

seq1  TAGGACTGATTATCAATCTACATTAGGTTCAGGGAGGAAATGACCAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTGATTATCAATCTACATTAGGTTCAGGGAGGAAATGACCAAGAC  750

seq1  CTGAACTAAGACAGTCAGTGACTGGCAATAGCCCTCCTTGTCAGAGGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGAACTAAGACAGTCAGTGACTGGCAATAGCCCTCCTTGTCAGA-GTCT  799

seq1  GGGTAAAACTGAGAACATCGTTGGACTGGGAAGAGAATGACAAGGATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAACTGAGAACATCGTTGGACTGGGAAGAGAATGACAAGGATTGG  849

seq1  AGGGCGACTTCTGGATTTCTAGTTTGGAGCCAAAAATGATGCCTACTTCA  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGGCGACTTCTGGATTTCTAGTTTGGAGCC-AAAATGATGCCTACTTCA  898

seq1  TATTAACTAACATACATGTAACTGCCATGCTTCCCACCATGATGATAATA  950
      |||||||| ||||||||| ||||||||||||| |||||||||||||||||
seq2  TATTAACT-ACATACATG-AACTGCCATGCTT-CCACCATGATGATAATA  945

seq1  GACTAAGCCTCTAAAACTAAAAGCCATTCTCGATGAAATGTTTTCCTTTA  1000
      ||||||| |||||||||| ||||||| |||||||| |||||||  | |||
seq2  GACTAAG-CTCTAAAACT-AAAGCCA-TCTCGATG-AATGTTT--CCTTA  989

seq1  TAAG-AGTTGCTGTGG-TCTCT  1020
      |||| | ||||||||| |||||
seq2  TAAGAATTTGCTGTGGATCTCT  1011

seq1: chr2_60303133_60304254
seq2: B6Ng01-029L06.g_65_1162 (reverse)

seq1  CTTCCTAAGCTGCTTTTGGTCAGTCTTTTAGGAAAGCTAGTGAGAATAGG  50
      |||||| |||||||||  |||||||||    |||||||||||||||||||
seq2  CTTCCT-AGCTGCTTT--GTCAGTCTT---AGAAAGCTAGTGAGAATAGG  44

seq1  CCTCCTCTTGCACTAAGTTCACGTCCTGTGTACCACCCACTTCTAGTACC  100
       |||||| ||| || || |||||||||||||| ||||||||||||||| |
seq2  -CTCCTC-TGC-CT-AGGTCACGTCCTGTGTA-CACCCACTTCTAGTA-C  88

seq1  CTCCACCCAGCATGGTTCTCTCCTTGTATTGCCACAAGATTCCCTTGAAG  150
      |||   |||||||| |||||||  |||| |||||| ||||  ||||||||
seq2  CTC--ACCAGCATGATTCTCTC--TGTA-TGCCAC-AGAT--CCTTGAAG  130

seq1  AACGCCTATCACTGGTTACCTTGCTTGGCTATGAAGCAACCTGCAAATGT  200
      |||| |||||||||| ||| ||||||||||||||||||| ||||||||||
seq2  AACG-CTATCACTGG-TACTTTGCTTGGCTATGAAGCAA-CTGCAAATGT  177

seq1  GCTCAGAAACAAGGCTGAGCACATACCCAGTATGTGGCATTTCATTTCAA  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTCAGAAACAAGGCTGAGCACATACCCAGTATGTGGCATTTCA-TTCAA  226

seq1  AACCCAGAGGAGCCTTAAACCTGACCATGCTGACCATGGTTTATCAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGAGGAGCCTTAAACCTGACCATGCTGACCATGGTTTATCAATGT  276

seq1  GATGGGTTTCCTAGCCCTTGCACTGTGAAGGGCACCTTGAAGGATACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTTCCTAGCCCTTGCACTGTGAAGGGCACCTTGAAGGATACAAG  326

seq1  TCTGTCTGGCTTTGCTGGGGTCCAGTTGCCCTTAACTGGCAGGTTTCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGGCTTTGCTGGGGTCCAGTTGCCCTTAACTGGCAGGTTTCAAC  376

seq1  TGATTTGGAAGAACTAGTGCCCAGGTACCCTGGATGGTCCTACATGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGGAAGAACTAGTGCCCAGGTACCCTGGATGGTCCTACATGACTG  426

seq1  ATCAAGGAATGGTCCTGATGCAGAGCTGAAGTTACAGAATGCCATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAATGGTCCTGATGCAGAGCTGAAGTTACAGAATGCCATGAAAT  476

seq1  AGTGATTTCAGGCCTTCTTTTAATCTGTTGGGACACATCTGAGGCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTCAGGCCTTCTTTTAATCTGTTGGGACACATCTGAGGCACACA  526

seq1  CTTACCCTAGAGAAGCTTTGTGCCACCTTACGAGGAGACGACCTCCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCTAGAGAAGCTTTGTGCCACCTTACGAGGAGACGACCTCCTGTT  576

seq1  TGCCCCTGCAGGGCTCTCTTTACTAACTGGATCTGTTCTCTCAGATCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGCAGGGCTCTCTTTACTAACTGGATCTGTTCTCTCAGATCAAA  626

seq1  GAACATTTCTGTTTCTATGCATTATTCTCTCTCTCTCTTTAATCAGTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCTGTTTCTATGCATTATTCTCTCTCTCTCTTTAATCAGTAGC  676

seq1  AATGGCTAGTGTGGTTCAAAACTAGCTTTCATGGTTTAAGGAATGTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTAGTGTGGTTCAAAACTAGCTTTCATGGTTTAAGGAATGTTCTA  726

seq1  CTTCTCTCAAAATGCTAAGGCTGGAGAGTCCTTTTGCTGTTTTTTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCAAAATGCTAAGGCTGGAGAGTCCTTTTGCTGTTTTTTAAAAA  776

seq1  AGGAGAATGTCAGAGTTTCCTGGTGTTGAGAGACTTAAGGATTGTGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGTCAGAGTTTCCTGGTGTTGAGAGACTTAAGGATTGTGGCAT  826

seq1  AAAAGAAAATACAGATAAAAGGCAAATTAAGCAATAAATCTGTGGTCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATACAGATAAAAGGCAAATTAAGCAATAAATCTGTGGTCCTG  876

seq1  AATTGAAACCGAAATTATGGGTTTGAAAAAAAAATCTCATCCTCACATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAACCGAAATTATGGGTTTGAAAAAAAAATCTCATCCTCACATGT  926

seq1  GCAGTGCAAGCAAACACACAGGCAACACATTTCCCAGACCTGTCCAAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCAAGCAAACACACAGGCAACACATTTCCCAGACCTGTCCAAGGA  976

seq1  AATAGCTGATAAACAAGAACAAACTCACAGTGAGCCCCCTTATGGCCAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGATAAACAAGAACAAACTCACAGTGAGCCCCCTTATGGCCAGA  1026

seq1  TTAGTGTAGAGATTACATTTCTTCCCATCAAAGGAAAACCTGGGGCTTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTAGAGATTACATTTCTTCCCATCAAAGGAAAACCTGGGGCTTCC  1076

seq1  TGATGACCTGGTGCAGGAATTC  1122
      ||||||||||||||||||||||
seq2  TGATGACCTGGTGCAGGAATTC  1098