BAC Information

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BAC

Clone NameB6Ng01-031A22
Chromosome2 (Build37)
Map Location 142,776,687 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031A22.bB6Ng01-031A22.g
ACCDH860779DH860780
length9391,195
definitionDH860779|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A22, 5' end.DH860780|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatcttcacttccttcgtagagtcacgcgagatatttt
gaattcctgaacagaacagcaatggcttgtgctataagatcaagaattga
caaattggacctcgtgaaattgcaaagcttctgtaaggcaaaagacactg
tcaataagacaaaaaggccactaacagattgggaaaggatctttactaat
cctaaatctgatacaggacttatatccaatatatacaaagagctcaagaa
gctgaactccagaaattctaataaccccattaaaaaatgaggtacagaaa
taaacaaagaattcttttctggggaataccaaaggcctcggagcatctga
aaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaacc
ctgagattccatctcacaccagtcagaatggctaagatccaaaattcagg
tgacagcagttgctggcgaggatgtggagaaagaggaacactcctccatt
gttggtgggattgcaagcttgtacaaccactttggaaatcagtctggcgg
ttcctcagaaaattggacatagtactaccagaagatccaggaatacctct
cctgggcatatacccagaagatgttccaaccggtaataaggacacatgct
ccactatgttcatggcagccttatttataatagccagaagctggaaagaa
cccagatgtcccttcaacctaggaatggatacagaaaatgtggtacattt
acacaatggagtactactcagctattataaagaatgaatttatgaaattc
ttgggcaaatggatgtatctggaggatatcatcctgagtgcggtaaccaa
atcacaaaaaagtcacttgatatgcactcactgataagtgggtattagtc
cagaaactagaatacctaagatatactagcaaaacacagaaaatctagaa
aaggatacatctggtggatacttcatcctccttagatagggacaaatact
aaggatgagttacagagacaagtttggagcaagatgaaaggatggacatc
aagactactccactggggtctatccataatcagcacaacagaacttatgg
acttacagcagatttgcgaaggacctgaatactctatgtgagctagacgt
gcctggcaaccagaagtgagtcaggctctattggatgaacagtggccaat
ggggagcggaattctcaagagagttgagaggctcacacctagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776687_142777698
seq2: B6Ng01-031A22.b_44_595 (reverse)

seq1  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  50

seq1  TCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACA  100
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACA  100

seq1  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGA  150

seq1  ATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTG  200

seq1  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGA  250

seq1  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAAC  300
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAAC  300

seq1  AGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCT  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAACAGCAATGGCTTGTACTGTAAGATCGAGAATTGACAAATGGGACCT  350

seq1  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAA  400
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  AATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAA  400

seq1  AAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  450

seq1  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAG  500

seq1  AAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGG  550
      |||||||||||||||| ||||||||||||||||| ||            |
seq2  AAAATCAAATAACCCCCTTAAAAAATGGGGCTCAGAA----------CTG  540

seq1  AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATC  600
      || |||||    |||                                   
seq2  AACAAAGA----ATTC----------------------------------  552

seq1  ATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCA  650
                                                        
seq2  --------------------------------------------------  552

seq1  AATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTT  700
                                                        
seq2  --------------------------------------------------  552

seq1  ATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAA  750
                                                        
seq2  --------------------------------------------------  552

seq1  ATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACA  800
                                                        
seq2  --------------------------------------------------  552

seq1  AATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTC  850
                                                        
seq2  --------------------------------------------------  552

seq1  TATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCC  900
                                                        
seq2  --------------------------------------------------  552

seq1  TAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGG  950
                                                        
seq2  --------------------------------------------------  552

seq1  TGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTG  1000
                                                        
seq2  --------------------------------------------------  552

seq1  AACAAAGAATTC  1012
                  
seq2  ------------  552