BAC Information

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BAC

Clone NameB6Ng01-031C05
Chromosome2 (Build37)
Map Location 156,978,791 - 156,979,863
singlet/doubletsinglet
Overlap geneRbl1
Upstream geneRbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1
Downstream geneLOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031C05.bB6Ng01-031C05.g
ACCDH860837DH860838
length1,069295
definitionDH860837|Mus musculus domesticus DNA, BAC clone: B6Ng01-031C05, 5' end.DH860838|Mus musculus domesticus DNA, BAC clone: B6Ng01-031C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcattgtgataggtattctgtaatattaaattaataacttgga
ttatatttcttttaacaaaattaaaaagaaaatccgtataaaaaagcagt
tatattctcagagaaatctatctgcatacttcacaaagcacactgggagt
gcagtggcacaagcctgtgatcacagcacttggaggactgaggggagggg
gagaatcaagagtccaagctagcctgggctacaccaggagactgttaaag
aaataatccaaccagaatgtcgagaaatgtaattgtgtggactgaatgtg
aggcgggtgtctctagtgacagctcacaacacatttcacaagggcagttc
tgagctcactgtcacctatggcctttattaaagggaaccagctctggtta
ggtcttaagcaacttcaaaatgggcagcagggaaacaccctgagttcaga
ggccaagaaggcccacagagactcagcctgtttgtctgaagtagtggaag
gattatagaaggcaaagcatatgtttacaggttaggaaagacacaaagtg
aaccaggtgtggtgatgcacttctttgatgctggcacatagagttctagg
acccctgggtctacacagtaagaacctggctcaaacaacaacaagaggat
tgctgtgtttatcttcttgcaaatacaaggagaggaagttgtagggcttg
ttgttagttttggtaagttttattctgtagtaggcttgtagccctcttcc
tgcctcagcctccagagtgttgggatttaggcctgagccagaactggccc
gcacattctaggactcttgtttctcctgcaaacaggaattctagttttca
actgttatcccctcagctgttaaaacagaaaacaaagttcactctaatgt
gctgtcttatctgttggcaccacttaaattgacttcagcagagctgcagt
ctgctcatttggcaggaggttatctagggagagctaaaactaggaggtga
tcttccggagatggttctgcctaagactgtcattggatgactgtcatggt
tggaattgctggaccacgc
cagaggcagaagttagcatattgtgtgactcccagtcatatgagcatcct
gaagaggcaaagcacagagaaagtagatttgtagatgctggggctggaaa
caggagagatgggaaagtagctagtgctaagagtctgctttctaggatga
ccaaaatgttctagaatagacagttctaaacacacaccaagaatatctaa
ctacatacttccaatgagtaaatttcatgggattgtaagttatatctcaa
agtcacagagaagagaggaagggaggaaggaggggaggagagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156978791_156979863
seq2: B6Ng01-031C05.b_46_1114

seq1  GAATTCAGCATTGTGATAGGTATTCTGTAATATTAAATTAATAACTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTGTGATAGGTATTCTGTAATATTAAATTAATAACTTGGA  50

seq1  TTATATTTCTTTTAACAAAATTAAAAAGAAAATCCGTATAAAAAAGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCTTTTAACAAAATTAAAAAGAAAATCCGTATAAAAAAGCAGT  100

seq1  TATATTCTCAGAGAAATCTATCTGCATACTTCACAAAGCACACTGGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTCAGAGAAATCTATCTGCATACTTCACAAAGCACACTGGGAGT  150

seq1  GCAGTGGCACAAGCCTGTGATCACAGCACTTGGAGGACTGAGGGGAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGCACAAGCCTGTGATCACAGCACTTGGAGGACTGAGGGGAGGGG  200

seq1  GAGAATCAAGAGTCCAAGCTAGCCTGGGCTACACCAGGAGACTGTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCAAGAGTCCAAGCTAGCCTGGGCTACACCAGGAGACTGTTAAAG  250

seq1  AAATAATCCAACCAGAATGTCGAGAAATGTAATTGTGTGGACTGAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCAACCAGAATGTCGAGAAATGTAATTGTGTGGACTGAATGTG  300

seq1  AGGCGGGTGTCTCTAGTGACAGCTCACAACACATTTCACAAGGGCAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGGTGTCTCTAGTGACAGCTCACAACACATTTCACAAGGGCAGTTC  350

seq1  TGAGCTCACTGTCACCTATGGCCTTTATTAAAGGGAACCAGCTCTGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCACTGTCACCTATGGCCTTTATTAAAGGGAACCAGCTCTGGTTA  400

seq1  GGTCTTAAGCAACTTCAAAATGGGCAGCAGGGAAACACCCTGAGTTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTAAGCAACTTCAAAATGGGCAGCAGGGAAACACCCTGAGTTCAGA  450

seq1  GGCCAAGAAGGCCCACAGAGACTCAGCCTGTTTGTCTGAAGTAGTGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAGGCCCACAGAGACTCAGCCTGTTTGTCTGAAGTAGTGGAAG  500

seq1  GATTATAGAAGGCAAAGCATATGTTTACAGGTTAGGAAAGACACAAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAGAAGGCAAAGCATATGTTTACAGGTTAGGAAAGACACAAAGTG  550

seq1  AACCAGGTGTGGTGATGCACTTCTTTGATGCTGGCACATAGAGTTCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGTGTGGTGATGCACTTCTTTGATGCTGGCACATAGAGTTCTAGG  600

seq1  ACCCCTGGGTCTACACAGTAAGAACCTGGCTCAAACAACAACAAGAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGGGTCTACACAGTAAGAACCTGGCTCAAACAACAACAAGAGGAT  650

seq1  TGCTGTGTTTATCTTCTTGCAAATACAAGGAGAGGAAGTTGTAGGGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTTTATCTTCTTGCAAATACAAGGAGAGGAAGTTGTAGGGCTTG  700

seq1  TTGTTAGTTTTGGTAAGTTTTATTCTGTAGTAGGCTTGTAGCCCTCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTTTTGGTAAGTTTTATTCTGTAGTAGGCTTGTAGCCCTCTTCC  750

seq1  TGCCTCAGCCTCCAGAGTGTTGGGATTTAGGCCTGAGCCAGAACTGGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGCCTCCAGAGTGTTGGGATTTAGGCCTGAGCCAGAACTGGCCC  800

seq1  GCACATTCTAGGACTCTTGTTTCTCCTGCAAAACAGGAATTCTAGTTTTC  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCACATTCTAGGACTCTTGTTTCTCCTGC-AAACAGGAATTCTAGTTTTC  849

seq1  AACTGTTATCCCCTCAGCTGTTAAAACAGAAAACAAAGTTCACTCTAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTATCCCCTCAGCTGTTAAAACAGAAAACAAAGTTCACTCTAATG  899

seq1  TGCTGTCTTATCTGTTGGCACCACTTAAATTGACTTCAAGCAGAGCTGCA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTGTCTTATCTGTTGGCACCACTTAAATTGACTTC-AGCAGAGCTGCA  948

seq1  GTCTGCTCATTTGCCAGGA-GCTATCTAGGAGAAGCTAAAAACTAGGAGG  999
      ||||||||||||| ||||| | ||||||||   |||| ||||||||||||
seq2  GTCTGCTCATTTGGCAGGAGGTTATCTAGGGAGAGCT-AAAACTAGGAGG  997

seq1  TGATCTTCCTGAGATGGTTCTGCCATAGACTGTCATTGTATGACTGTCAT  1049
      ||||||||| ||||||||||||||  |||||||||||| |||||||||||
seq2  TGATCTTCCGGAGATGGTTCTGCCTAAGACTGTCATTGGATGACTGTCAT  1047

seq1  GGTTTGAATATGCTTGACCCACGC  1073
      |||| |||| |||| || ||||||
seq2  GGTTGGAAT-TGCTGGA-CCACGC  1069