BAC Information

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BAC

Clone NameB6Ng01-031E18
Chromosome2 (Build37)
Map Location 157,750,732 - 157,849,300
singlet/doubletdoublet
Overlap geneGm691, 2610036D13Rik
Upstream geneNdrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1, LOC100043681
Downstream gene2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031E18.bB6Ng01-031E18.g
ACCDH860957DH860958
length1,100780
definitionDH860957|Mus musculus domesticus DNA, BAC clone: B6Ng01-031E18, 5' end.DH860958|Mus musculus domesticus DNA, BAC clone: B6Ng01-031E18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,750,732 - 157,751,862)(157,848,528 - 157,849,300)
sequence
gaattcttacttcactaaaggaataattgggtggtggcggcacaggtctt
tagtcccagcacttgggaagcagaggcaggcagatctctgtgagttcaag
tccagcctaatctacaaagaaagttccaggtttcaagcaagcaaaagaac
aagaaacacacagcccagttgacagagtgctcgcctcgcgtagctgaagc
ctcaggttttattcccagtaccatgtaactgagcacagtaccccacatct
gatctcagtccctgggaggaagagcgaggaggattgagagttcgaggctg
ttatctgtggctgcatagcaatttggaggttggcctgggacacatgtggc
accctctcttgaaaatgaggaaggagggaaagagggaagaactgattgat
ttgtgcaaagaggaatgagggctagtgaggtggctctatgggtaaaggta
caaggcctgactacctgggttcaacccccaggagccatatgcttggaagg
acagaaccgactcccaaaagggtcttctgaacctacgagtggcacggtgc
aagccccacctgactcttcatacaaagtaaagtagataaaaatggaaaaa
caaacaaacaccccaacgtgtcctgtcatgagacactgccactcccctca
aagccactgtgctcagtgaaaaaagccagtcgtggagcacatctgaccac
gtacgaatgcccagcacagacggatccagtgaggctgtacagacgtacca
cgggccagggctggaggaaggtgaagtaggggagattgcctactggttca
ggcttcctttgctgtggtaagactgtgtggggaaagacagcactgaaggt
gtgcatactgtgggtcttctggaaactcttttccttcatttctgggtgtt
aattttaagtcagttttacttgggctgaaataactcgggcatataatatg
gtggcacttgcctttgatcccgcactggggagagaggaataccttcaagt
gtgaaacgaccacatactagataggtagcagtatgaagtgtctcccagca
tcttgaggactgccttctcattcatttatagatgggataccgaaactgag

gaattcaaagccagcctggtctacagagttccatgacagccagagctaca
cagtgaaaccctgccttgaagaaaaacaaacaaacaaacaaaaaacaaaa
aagacaagcttcagcccaatttttttgcatacagtttttcacaactttcc
tgaaagtggaatttatgtgcacaagtccaaagagtgtggtaaatgctttc
ttcgttactatcaaaaactgcctgccgtgactggacttttacattgttat
gttttaaaaaaaagatttcttttttttatttctgtgtatggggggggggg
gcaatatacacacatgtgtgcaagtgtctgcagaagccaaagaaagtgtt
ggatcccctggagctggagttaaaagtatttgtacgctacttgatgtggg
tgctgggaactgcacttggttctctgaactgctgaaccatctccatcccc
attgccaacttttttaattaaaatgttttttatgccaaccttccttctac
tggctcaactagtagagtttaataataaatgtttaataataatgttccaa
tgagatgttttcctcctatagtattacggtagttcttcaggtaattacta
aaagattcagaatctaattgtttataatactttcatttcactttggtagt
tcaggggatctataaatctccccctggggattcttcataataactgttaa
taaaatcttgggactccaggggccagaacccagaaagggatggaagggaa
aaaaaaaacctttggagagatttctggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157750732_157751862
seq2: B6Ng01-031E18.b_43_1142

seq1  GAATTCTTACTTCACTAAAGGAATAATTGGGTGGTGGCGGCACAGGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTTCACTAAAGGAATAATTGGGTGGTGGCGGCACAGGTCTT  50

seq1  TAGTCCCAGCACTTGGGAAGCAGAGGCAGGCAGATCTCTGTGAGTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCAGCACTTGGGAAGCAGAGGCAGGCAGATCTCTGTGAGTTCAAG  100

seq1  TCCAGCCTAATCTACAAAGAAAGTTCCAGGTTTCAAGCAAGCAAAAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTAATCTACAAAGAAAGTTCCAGGTTTCAAGCAAGCAAAAGAAC  150

seq1  AAGAAACACACAGCCCAGTTGACAGAGTGCTCGCCTCGCGTAGCTGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACACACAGCCCAGTTGACAGAGTGCTCGCCTCGCGTAGCTGAAGC  200

seq1  CTCAGGTTTTATTCCCAGTACCATGTAACTGAGCACAGTACCCCACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTTTTATTCCCAGTACCATGTAACTGAGCACAGTACCCCACATCT  250

seq1  GATCTCAGTCCCTGGGAGGAAGAGCGAGGAGGATTGAGAGTTCGAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGTCCCTGGGAGGAAGAGCGAGGAGGATTGAGAGTTCGAGGCTG  300

seq1  TTATCTGTGGCTGCATAGCAATTTGGAGGTTGGCCTGGGACACATGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGGCTGCATAGCAATTTGGAGGTTGGCCTGGGACACATGTGGC  350

seq1  ACCCTCTCTTGAAAATGAGGAAGGAGGGAAAGAGGGAAGAACTGATTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCTTGAAAATGAGGAAGGAGGGAAAGAGGGAAGAACTGATTGAT  400

seq1  TTGTGCAAAGAGGAATGAGGGCTAGTGAGGTGGCTCTATGGGTAAAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAAAGAGGAATGAGGGCTAGTGAGGTGGCTCTATGGGTAAAGGTA  450

seq1  CAAGGCCTGACTACCTGGGTTCAACCCCCAGGAGCCATATGCTTGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTGACTACCTGGGTTCAACCCCCAGGAGCCATATGCTTGGAAGG  500

seq1  ACAGAACCGACTCCCAAAAGGGTCTTCTGAACCTACGAGTGGCACGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACCGACTCCCAAAAGGGTCTTCTGAACCTACGAGTGGCACGGTGC  550

seq1  AAGCCCCACCTGACTCTTCATACAAAGTAAAGTAGATAAAAATGGAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCACCTGACTCTTCATACAAAGTAAAGTAGATAAAAATGGAAAAA  600

seq1  CAAACAAACACCCCAACGTGTCCTGTCATGAGACACTGCCACTCCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACACCCCAACGTGTCCTGTCATGAGACACTGCCACTCCCCTCA  650

seq1  AAGCCACTGTGCTCAGTGAAAAAAGCCAGTCGTGGAGCACATCTGACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGTGCTCAGTGAAAAAAGCCAGTCGTGGAGCACATCTGACCAC  700

seq1  GTACGAATGCCCAGCACAGACGGATCCAGTGAGGCTGTACAGACGTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGAATGCCCAGCACAGACGGATCCAGTGAGGCTGTACAGACGTACCA  750

seq1  C-GGCCAGGGCTGGAGGAAGGTGAAGTAGGGGAGATTGCCTACTGGTTCA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCAGGGCTGGAGGAAGGTGAAGTAGGGGAGATTGCCTACTGGTTCA  800

seq1  GGGCTTCCTTTGCTGTGGTAAGACTGTGTGGGGACAAGACAGCACTGAAG  849
       ||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  -GGCTTCCTTTGCTGTGGTAAGACTGTGTGGGGA-AAGACAGCACTGAA-  847

seq1  GGTGTGCAATACTGTGGGTCTCCTGGAAACTCTTTATCCTTCATTTCTGG  899
      ||||||| ||||||||||||| ||||||||||||| ||||||||||||||
seq2  GGTGTGC-ATACTGTGGGTCTTCTGGAAACTCTTT-TCCTTCATTTCTGG  895

seq1  GTTGGTTAATTTTAAGTCAGTTTTACCTGGGCTGAAAATAACTCGGGCAT  949
      ||  |||||||||||||||||||||| ||||||| |||||||||||||||
seq2  GT--GTTAATTTTAAGTCAGTTTTACTTGGGCTG-AAATAACTCGGGCAT  942

seq1  ATAATAATGGTGGCACATGCCTTTGATCCCGGCACTGGGGAAGGAGAAGG  999
      ||||| |||||||||| ||||||||||||| ||||||||||  ||||  |
seq2  ATAAT-ATGGTGGCACTTGCCTTTGATCCC-GCACTGGGGA--GAGA--G  986

seq1  AAATAGCTCTCCAAGGTGGAAACAGACCACAATACTAGATAGTGTAGCAG  1049
       ||||   || ||||   ||||| |||||| ||||||||||| |||||||
seq2  GAATA--CCTTCAAGTGTGAAAC-GACCAC-ATACTAGATAG-GTAGCAG  1031

seq1  TATAGAAAGTGTCTCACAGCAGTTTCTTGAGGCAGCTGCCATCATCATTC  1099
      |||   ||||||||| |||||   ||||||||   ||||| || ||||||
seq2  TAT--GAAGTGTCTCCCAGCA---TCTTGAGG--ACTGCCTTC-TCATTC  1073

seq1  CCATTTTATAGATGGAGATACAGAAAACTGAG  1131
          ||||||||||| ||||| | ||||||||
seq2  ---ATTTATAGATGG-GATACCG-AAACTGAG  1100

seq1: chr2_157848528_157849300
seq2: B6Ng01-031E18.g_64_843 (reverse)

seq1  ATTCCAGTAATCTCTCCAATG--TTTTTTTTTCCCTTCCATCCCTTTCTG  48
      ||||||| ||||||||||| |  |||||||||||||||||||||||||||
seq2  ATTCCAGAAATCTCTCCAAAGGTTTTTTTTTTCCCTTCCATCCCTTTCTG  50

seq1  GTTTCTGGCCCCTGGAGT-CCAAGATTTTATT-ACAGTTACTATGAAGAA  96
      | |||||||||||||||| ||||||||||||| ||||||| |||||||||
seq2  GGTTCTGGCCCCTGGAGTCCCAAGATTTTATTAACAGTTATTATGAAGAA  100

seq1  T-CCCAGGGGGAGATTTATAGAT-CCCTGAACTTACAAAAGTGAAATGAA  144
      | ||||||||||||||||||||| |||||||| ||| |||||||||||||
seq2  TCCCCAGGGGGAGATTTATAGATCCCCTGAAC-TACCAAAGTGAAATGAA  149

seq1  AGTATTATAAACAATTAGATTCTGAATCTTTTAGTAATTACCTGAAGAAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTATAAACAATTAGATTCTGAATCTTTTAGTAATTACCTGAAGAAC  199

seq1  TACCGTAATACTATAGGAGGAAAACATCTCATTGGAACATTATTATTAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTAATACTATAGGAGGAAAACATCTCATTGGAACATTATTATTAAA  249

seq1  CA-TTATTATTAAACTCTACTAGTTGAGCCAGTAGAAGGAAGGTTGGCAT  293
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTATTAAACTCTACTAGTTGAGCCAGTAGAAGGAAGGTTGGCAT  299

seq1  -AAAAACATTTTAATTAAAAAAGTTGGCAATGGGGATGGAGATGGTTCAG  342
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACATTTTAATTAAAAAAGTTGGCAATGGGGATGGAGATGGTTCAG  349

seq1  CAGTTCAGAGAACCAAGTGCAGTTCCCAGCACCCACATCAAGTAGCGTAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGAGAACCAAGTGCAGTTCCCAGCACCCACATCAAGTAGCGTAC  399

seq1  AAATACTTTTAACTCCAGCTCCAGGGGATCCAACACTTTCTTTGGCTTCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTTTAACTCCAGCTCCAGGGGATCCAACACTTTCTTTGGCTTCT  449

seq1  GCAGACACTTGCACACATGTGTGTATATTGCCCCCCCCCCCCATACACAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACTTGCACACATGTGTGTATATTGCCCCCCCCCCCCATACACAG  499

seq1  AAATAAAAAAAAGAAATCTTTTTTTTAAAACATAACAATGTAAAAGTCCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAAAAAGAAATCTTTTTTTTAAAACATAACAATGTAAAAGTCCA  549

seq1  GTCACGGCAGGCAGTTTTTGATAGTAACGAAGAAAGCATTTACCACACTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGGCAGGCAGTTTTTGATAGTAACGAAGAAAGCATTTACCACACTC  599

seq1  TTTGGACTTGTGCACATAAATTCCACTTTCAGGAAAGTTGTGAAAAACTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTTGTGCACATAAATTCCACTTTCAGGAAAGTTGTGAAAAACTG  649

seq1  TATGCAAAAAAATTGGGCTGAAGCTTGTCTTTTTTGTTTTTTGTTTGTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAAAAAATTGGGCTGAAGCTTGTCTTTTTTGTTTTTTGTTTGTTT  699

seq1  GTTTGTTTTTCTTCAAGGCAGGGTTTCACTGTGTAGCTCTGGCTGTCATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTCTTCAAGGCAGGGTTTCACTGTGTAGCTCTGGCTGTCATG  749

seq1  GAACTCTGTAGACCAGGCTGGCTTTGAATTC  773
      |||||||||||||||||||||||||||||||
seq2  GAACTCTGTAGACCAGGCTGGCTTTGAATTC  780