BAC Information

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BAC

Clone NameB6Ng01-031F14
Chromosome2 (Build37)
Map Location 36,131,140 - 36,272,695
singlet/doubletdoublet
Overlap geneOlfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440
Upstream geneGsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1
Downstream geneOlfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031F14.bB6Ng01-031F14.g
ACCDH860991DH860992
length1,071975
definitionDH860991|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F14, 5' end.DH860992|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,271,615 - 36,272,695)(36,131,140 - 36,132,120)
sequence
gaattcatggaaccagagctgatacataaggacaccacaagaacccatct
atattactccaagcaagccctaaatattcccataaaacagaaacacagga
aagagaccatgaaaccagctttatggagacgattgtgattcttaatgaga
aaactaataaatgtctttaaaattcagacaagcataaacaaacaattgga
ggaaaatattaaaaacctttttaaaaggtcaagagagctgatttctctct
gcttcatcttctggaccctactcctaatagtaatgcagatatgcactcca
ttcccccttgcctttattcctgaagaactactgccacctttaaagatcag
gtgagctccatatgctcagtccactggcaccatactctctggggaaagaa
ctgaggacttagcctcttcttgtcccctctgtgatccatcttccagttca
tatccctacctacaatcttggatcctcgctacattcccccagacacagtt
ctgcctgcatgtctctgtcttgtgccactggggatatttgggcctacaga
caccagggaccaccagttctgcctccatcccttggggtatactgccaccc
aagacaaccagaggactgaagataatagtgacttaccctcttcctataac
cctggaagcctgctaatacccagaacaaagagctctaccttcattcatag
agttcttctacaatcagtttagtgtcccacattcctagtctccttacccc
agaatccaataggaagagatgttgtaatacatgagactctagcctggggc
agagattcccagttttactagagtcctcaaagactgggaagaattccaga
taagctgcctttcccccaaatatctgactatctaaatatcctccttctct
acccaagtcctgtgtcctacttgctctgctctggccccacaaagacatag
attccctgctctactgaaacctgggagactggtaagtgtccagtaggctg
ccctgctagataatttgccactctgtcttgctacactatgcccactttcc
cccattctagttgccatactt
gaattcttgacagcagcattgagttgcaaataccttcaagttaagtttag
ttttttttttttttaattttaactaacacatacttgtgaaaattacatca
gctagagattacagtttgtctcaagataacttcttactcaggcgaacatc
acaaatctctgccttcactaacattctgactcagcttatgtcatgagtcg
aatatattccctaaaatttcatatagtggaaatttaacactcagtaggtt
ggtggtatttggaggtagggcattttcattagaaggagatgaagtaatga
gggtggggcccttattatgggattaagagaagattagagctgagtgtgtg
gtgtctttttttccatgccagcacacaaagtcttcactaagcacggatgt
cttcattttgtcttgtcttcatagcttgtacaactgtgagacacacattt
tgtccttttagtaatcatccagtctgtgctgttccattataagaacagaa
aatagatggaaacagcctacaaattctgttttccatcatagcccattgta
gagggaacatattagtgattaaattcatggcaatttcctaaccttaccaa
caaaaatgctgttttcttattacccatgcattttccataactagcagttg
cttaacaaaattctaggctccacataatctagggtcatggctgtccttca
tgctctaagggataagtatattatatgctaactcatgttatatgctaact
ccatggggctaatccaatgatgttcctttaatgaattcaacccagtagca
ctgtagagagccagatttccctcgaagacctattgaggggagtagcaaga
aatccatgtttatccgtcatcctgcctatgctgaagtagtctcataaggg
cttcctctgcctgagctacacacttcaggctactgctgtttagtaacgat
gctaaagctcctatttgatgattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36271615_36272695
seq2: B6Ng01-031F14.b_46_1116 (reverse)

seq1  AAGTATGGCAACTAGAAAGGGTGGGAAAGTGGGCATAGTGTAGGCATAGA  50
      ||||||||||||||||| ||  |||||||||||||||||||| ||| |||
seq2  AAGTATGGCAACTAGAATGG--GGGAAAGTGGGCATAGTGTA-GCA-AGA  46

seq1  CAGAGTGGGCAAATTTATCTAGCAGGGCAGCCTACTTGGACACTTACCAG  100
      |||||| |||||| ||||||||||||||||||||| ||||||||||||||
seq2  CAGAGT-GGCAAA-TTATCTAGCAGGGCAGCCTAC-TGGACACTTACCAG  93

seq1  TCTCCCAGGTTTCAGTAGAGCAGGGAATCTATGTCTTTGTTGGGGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTCCCAGGTTTCAGTAGAGCAGGGAATCTATGTCTTTG-TGGGGCCAGA  142

seq1  GCAGAGCAAGTAGGAACACAGGACTTGGGTAGAGAAGGAGGATATTTAGA  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCAGAGCAAGTAGG-ACACAGGACTTGGGTAGAGAAGGAGGATATTTAGA  191

seq1  TAGTCAGAATATTTGGGGGAAAGGCAGCTTATCTGGAATTCTTCCCAGTC  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAG-ATATTTGGGGGAAAGGCAGCTTATCTGGAATTCTTCCCAGTC  240

seq1  TTTGAGGACTCTAGTAAAACTGGGAATCTCTGCCCCAGGCTAGAGTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGACTCTAGTAAAACTGGGAATCTCTGCCCCAGGCTAGAGTCTCA  290

seq1  TGTATTACAACATCTCTTCCTATTGGATTCTGGGGTAAGGAGACTAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACAACATCTCTTCCTATTGGATTCTGGGGTAAGGAGACTAGGAA  340

seq1  TGTGGGACACTAAACTGATTGTAGAAGAACTCTATGAATGAAGGTAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACACTAAACTGATTGTAGAAGAACTCTATGAATGAAGGTAGAGC  390

seq1  TCTTTGTTCTGGGTATTAGCAGGCTTCCAGGGTTATAGGAAGAGGGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTCTGGGTATTAGCAGGCTTCCAGGGTTATAGGAAGAGGGTAAG  440

seq1  TCACTATTATCTTCAGTCCTCTGGTTGTCTTGGGTGGCAGTATACCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTATCTTCAGTCCTCTGGTTGTCTTGGGTGGCAGTATACCCCAA  490

seq1  GGGATGGAGGCAGAACTGGTGGTCCCTGGTGTCTGTAGGCCCAAATATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGAGGCAGAACTGGTGGTCCCTGGTGTCTGTAGGCCCAAATATCC  540

seq1  CCAGTGGCACAAGACAGAGACATGCAGGCAGAACTGTGTCTGGGGGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCACAAGACAGAGACATGCAGGCAGAACTGTGTCTGGGGGAATG  590

seq1  TAGCGAGGATCCAAGATTGTAGGTAGGGATATGAACTGGAAGATGGATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGAGGATCCAAGATTGTAGGTAGGGATATGAACTGGAAGATGGATCA  640

seq1  CAGAGGGGACAAGAAGAGGCTAAGTCCTCAGTTCTTTCCCCAGAGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGACAAGAAGAGGCTAAGTCCTCAGTTCTTTCCCCAGAGAGTAT  690

seq1  GGTGCCAGTGGACTGAGCATATGGAGCTCACCTGATCTTTAAAGGTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCAGTGGACTGAGCATATGGAGCTCACCTGATCTTTAAAGGTGGCA  740

seq1  GTAGTTCTTCAGGAATAAAGGCAAGGGGGAATGGAGTGCATATCTGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTTCAGGAATAAAGGCAAGGGGGAATGGAGTGCATATCTGCATT  790

seq1  ACTATTAGGAGTAGGGTCCAGAAGATGAAGCAGAGAGAAATCAGCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAGGAGTAGGGTCCAGAAGATGAAGCAGAGAGAAATCAGCTCTCT  840

seq1  TGACCTTTTAAAAAGGTTTTTAATATTTTCCTCCAATTGTTTGTTTATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTTAAAAAGGTTTTTAATATTTTCCTCCAATTGTTTGTTTATGC  890

seq1  TTGTCTGAATTTTAAAGACATTTATTAGTTTTCTCATTAAGAATCACAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGAATTTTAAAGACATTTATTAGTTTTCTCATTAAGAATCACAAT  940

seq1  CGTCTCCATAAAGCTGGTTTCATGGTCTCTTTCCTGTGTTTCTGTTTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCATAAAGCTGGTTTCATGGTCTCTTTCCTGTGTTTCTGTTTTAT  990

seq1  GGGAATATTTAGGGCTTGCTTGGAGTAATATAGATGGGTTCTTGTGGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATTTAGGGCTTGCTTGGAGTAATATAGATGGGTTCTTGTGGTGT  1040

seq1  CCTTATGTATCAGCTCTGGTTCCATGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  CCTTATGTATCAGCTCTGGTTCCATGAATTC  1071

seq1: chr2_36131140_36132120
seq2: B6Ng01-031F14.g_67_1041

seq1  GAATTCTTGACAGCAGCATTGAGTTGCAAATACCTTCAAGTTAAGTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACAGCAGCATTGAGTTGCAAATACCTTCAAGTTAAGTTTAG  50

seq1  TTTTTTTTTTTTTTAATTTTAACTAACACATACTTGTGAAAATTACATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTAATTTTAACTAACACATACTTGTGAAAATTACATCA  100

seq1  GCTAGAGATTACAGTTTGTCTCAAGATAACTTCTTACTCAGGCGAACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGATTACAGTTTGTCTCAAGATAACTTCTTACTCAGGCGAACATC  150

seq1  ACAAATCTCTGCCTTCACTAACATTCTGACTCAGCTTATGTCATGAGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTCTGCCTTCACTAACATTCTGACTCAGCTTATGTCATGAGTCG  200

seq1  AATATATTCCCTAAAATTTCATATAGTGGAAATTTAACACTCAGTAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTCCCTAAAATTTCATATAGTGGAAATTTAACACTCAGTAGGTT  250

seq1  GGTGGTATTTGGAGGTAGGGCATTTTCATTAGAAGGAGATGAAGTAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTATTTGGAGGTAGGGCATTTTCATTAGAAGGAGATGAAGTAATGA  300

seq1  GGGTGGGGCCCTTATTATGGGATTAAGAGAAGATTAGAGCTGAGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGCCCTTATTATGGGATTAAGAGAAGATTAGAGCTGAGTGTGTG  350

seq1  GTGTCTTTTTTTCCATGCCAGCACACAAAGTCTTCACTAAGCACGGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTTTTTCCATGCCAGCACACAAAGTCTTCACTAAGCACGGATGT  400

seq1  CTTCATTTTGTCTTGTCTTCATAGCTTGTACAACTGTGAGACACACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTGTCTTGTCTTCATAGCTTGTACAACTGTGAGACACACATTT  450

seq1  TGTCCTTTTAGTAATCATCCAGTCTGTGCTGTTCCATTATAAGAACAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTTAGTAATCATCCAGTCTGTGCTGTTCCATTATAAGAACAGAA  500

seq1  AATAGATGGAAACAGCCTACAAATTCTGTTTTCCATCATAGCCCATTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGGAAACAGCCTACAAATTCTGTTTTCCATCATAGCCCATTGTA  550

seq1  GAGGGAACATATTAGTGATTAAATTCATGGCAATTTCCTAACCTTACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACATATTAGTGATTAAATTCATGGCAATTTCCTAACCTTACCAA  600

seq1  CAAAAATGCTGTTTTCTTATTACCCATGCATTTTCCATAACTAGCAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGCTGTTTTCTTATTACCCATGCATTTTCCATAACTAGCAGTTG  650

seq1  CTTAACAAAATTCTAGGCTCCACATAATCTAGGGTCATGGCTGTCCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAAAATTCTAGGCTCCACATAATCTAGGGTCATGGCTGTCCTTCA  700

seq1  TGCTCTAAGGGATAAGTATATTATATGCTAACTCATGTTATATGCTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTAAGGGATAAGTATATTATATGCTAACTCATGTTATATGCTAACT  750

seq1  CCATGGGGCTAATCCAATGATGATCC-TTAATGAATTCAAACCCAG-AGC  798
      |||||||||||||||||||||| ||| ||||||||||| ||||||| |||
seq2  CCATGGGGCTAATCCAATGATGTTCCTTTAATGAATTC-AACCCAGTAGC  799

seq1  ACTGTAGAGAGCCAGAATTCCCTTCGAAGACCTTATGA-GGGAGTAGCAA  847
      |||||||||||||||| ||||| ||||||||||  ||| |||||||||||
seq2  ACTGTAGAGAGCCAGATTTCCC-TCGAAGACCTATTGAGGGGAGTAGCAA  848

seq1  GAAATCCATGTTTATCCGTCATCCTGCCTATGCTGAAGTAGTCTCATAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCATGTTTATCCGTCATCCTGCCTATGCTGAAGTAGTCTCATAAG  898

seq1  GGCCTCCTCTTGCCTGAGCCTACAACACTTCAGGCTACTGCTGTTTAAGT  947
      ||| ||||| |||||||| |||| |||||||||||||||||||||| |||
seq2  GGCTTCCTC-TGCCTGAG-CTAC-ACACTTCAGGCTACTGCTGTTT-AGT  944

seq1  AACAGATGCTAAAGCTATCTATTTTGATGATTGC  981
      ||| ||||||||||||  ||| ||||||||||||
seq2  AAC-GATGCTAAAGCT-CCTA-TTTGATGATTGC  975