BAC Information

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BAC

Clone NameB6Ng01-031H24
Chromosome2 (Build37)
Map Location 42,714,958 - 42,716,045
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031H24.bB6Ng01-031H24.g
ACCDH861093DH861094
length1,2041,068
definitionDH861093|Mus musculus domesticus DNA, BAC clone: B6Ng01-031H24, 5' end.DH861094|Mus musculus domesticus DNA, BAC clone: B6Ng01-031H24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtccctcaaaatacaataccccttcatgttt
aaagtattggagagattaagtattcaaggcccttaccgaagcaatatata
gccaacatcaaattaaatagagagatacttgaagcaattccactaaaatc
atgaaaaagacaaggctgcccaatctacctatttattcaatatagcatgt
gaagttctaggtagagcatttagatatcaaatggaggacaatgggatata
aacttgaaaagaagaaattaaagtatcactatttgcagattatatgatag
tatacataagaaaacacaaacaatcaaccaaagaacttctaaagctgata
aacaagctcagaaaagtggctggatatagaaatgataaatgggctgagaa
agaaattagggaaacaacacccttaacaatagccaggtagtataaaatat
cttggataaaatatcttggtgtaaatctagtaagcaagtgaaagatctgt
atgacaagaacttcaaattcctgaaaaacataaccaaagaagacttcaaa
agatggaaagatctcccatgcttatggattggtagaattaacatagtaaa
aatgttcatcctaccaaaagcaatcaactgattcaatgcaatccccataa
atatttcaacacaattcttcacaagaacagttctcaatttcatatggaaa
aacaaacaaacaaacaaaaaacaaaacaaaacaaaaaaaaaggatagcca
aaacaattcttaacaataaaagaacttctggggaaatcaccacccctgac
cttaagctgtactacaaagcaataaatagtgattaaaaactgcatgtgac
ttgttcaggacagattgaacatcaatggaatagaactgaagacctagaat
cagcccatccactcctgggcattgatctttgacaaagaagccaaaacttg
caatagaaaaaaaatcatcttcataatgtgctggtctacctctcagtcag
tttgtgataagtaactggatccaaattttattaccatgcataagctcagt
tcagtggatcaggacctcgataaatcagatagcactggagtgagagaaag
gagggaaaacttactatgtcaggaaatttctgaacagaacctcatggtaa
ggccactcaaatatattaggattcttgacctggaagttcgtagagtcata
ctgc
gaattcactcttaaaaattcattggaaattcccgaatggagtacacatgc
cttccttttaaaatttagaagagaaaattggtttctcagccaagccgagc
tgagccatgtggttcctacccaagccatgcaggtcagaactagtatcgtt
cttcctagtttgccatgcgtgattttggagttcgtgacttaaggctaaag
cacacccaagcttatgcaagactgagggttactgattcagccagactccc
gttcaggttccgggctgctacaagagactaaaccatagattctacaagct
ccttctgggagaaggcaggcaacagagaacaggcttgagctgttcagata
aggcaggccagaaagcaggaaaaggtagaagggaggaataaaggaaaatt
atggaaagttttatagaaatttaaaaattcttcgcaaacaactggattct
tggaacatagggattctgggatagcttagcatggcattcagttgtaaatc
agcctagaattagaaggcaaattaattgaagttaaaacataggaaaggat
aaaaatctaagttacataaaaacaaagatataaatatatccacagatact
aatttacaagaaaagaaggaaataaaataattcaggcctttgatctcaaa
tgtagaaacaaagggacagacacaaggagaaaccttactcaacagataaa
aatagacagatattaatcgccacagaagggaggaacgaaggaaaatggca
ttgttttaaagatataaaagtaagaaaggagaataatagtaattgcttcg
aacgtttttaaatactaaatgttttatatggttttaaagaagatactaat
ttcctagaatggaggaataaagggaaaagtgtgtgtttaaggaaaagaag
ggagaaatagtgataattttattaatggtaattaaagaaaccaggcttta
tttcaaatttatgaaaacgagccaagacagaagagaactctacttcaaca
atacattatgttaaaatggtttaatgtttgagttggtttaattcaaatga
gatgatcgatagggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42714958_42716045
seq2: B6Ng01-031H24.g_65_1132

seq1  GAATTCACTCTTAAAAATTCATTGGAAATTCCCGAATGGAGTACACATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTAAAAATTCATTGGAAATTCCCGAATGGAGTACACATGC  50

seq1  CTTCCTTTTAAAATTTAGAAGAGAAAATTGGTTTCTCAGCCAAGCCGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTTAAAATTTAGAAGAGAAAATTGGTTTCTCAGCCAAGCCGAGC  100

seq1  TGAGCCATGTGGTTCCTACCCAAGCCATGCAGGTCAGAACTAGTATCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATGTGGTTCCTACCCAAGCCATGCAGGTCAGAACTAGTATCGTT  150

seq1  CTTCCTAGTTTGCCATGCGTGATTTTGGAGTTCGTGACTTAAGGCTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGTTTGCCATGCGTGATTTTGGAGTTCGTGACTTAAGGCTAAAG  200

seq1  CACACCCAAGCTTATGCAAGACTGAGGGTTACTGATTCAGCCAGACTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCAAGCTTATGCAAGACTGAGGGTTACTGATTCAGCCAGACTCCC  250

seq1  GTTCAGGTTCCGGGCTGCTACAAGAGACTAAACCATAGATTCTACAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGTTCCGGGCTGCTACAAGAGACTAAACCATAGATTCTACAAGCT  300

seq1  CCTTCTGGGAGAAGGCAGGCAACAGAGAACAGGCTTGAGCTGTTCAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGGAGAAGGCAGGCAACAGAGAACAGGCTTGAGCTGTTCAGATA  350

seq1  AGGCAGGCCAGAAAGCAGGAAAAGGTAGAAGGGAGGAATAAAGGAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCCAGAAAGCAGGAAAAGGTAGAAGGGAGGAATAAAGGAAAATT  400

seq1  ATGGAAAGTTTTATAGAAATTTAAAAATTCTTCGCAAACAACTGGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGTTTTATAGAAATTTAAAAATTCTTCGCAAACAACTGGATTCT  450

seq1  TGGAACATAGGGATTCTGGGATAGCTTAGCATGGCATTCAGTTGTAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATAGGGATTCTGGGATAGCTTAGCATGGCATTCAGTTGTAAATC  500

seq1  AGCCTAGAATTAGAAGGCAAATTAATTGAAGTTAAAACATAGGAAAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAATTAGAAGGCAAATTAATTGAAGTTAAAACATAGGAAAGGAT  550

seq1  AAAAATCTAAGTTACATAAAAACAAAGATATAAATATATCCACAGATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTAAGTTACATAAAAACAAAGATATAAATATATCCACAGATACT  600

seq1  AATTTACAAGAAAAGAAGGAAATAAAATAATTCAGGCCTTTGATCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAAGAAAAGAAGGAAATAAAATAATTCAGGCCTTTGATCTCAAA  650

seq1  TGTAGAAACAAAGGGACAGACACAAGGAGAAACCTTACTCAACAGATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAACAAAGGGACAGACACAAGGAGAAACCTTACTCAACAGATAAA  700

seq1  AATAGACAGATATTAATCGCCACAGAAGGGAGGAACGAAGGAAAATGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACAGATATTAATCGCCACAGAAGGGAGGAACGAAGGAAAATGGCA  750

seq1  TTGTTTTAAAGATATAAAAGTAAGAAAGGAGAAATAATAGTAATTGCTTC  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGTTTTAAAGATATAAAAGTAAGAAAGGAG-AATAATAGTAATTGCTTC  799

seq1  GAACGTTTTTAAATACTAAATGTTTTATATGGTTTTAAAG-AGATACTAA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAACGTTTTTAAATACTAAATGTTTTATATGGTTTTAAAGAAGATACTAA  849

seq1  TTTCCTAAGAATGGAGGAATAAA-GGAAAAGTGTGTTGTTTTAAGGATAG  898
      |||||| |||||||||||||||| ||||||||||| ||||| | | | ||
seq2  TTTCCT-AGAATGGAGGAATAAAGGGAAAAGTGTG-TGTTTAAGGAAAAG  897

seq1  AAGGGAGAAATAGTGATAATTTTTTATTAATGGTAAATTAAAGAAACCAA  948
      |||||||||||||||||||  ||||||||||||| ||||||||||||| |
seq2  AAGGGAGAAATAGTGATAA--TTTTATTAATGGT-AATTAAAGAAACC-A  943

seq1  GGCCTTTTATTTCAAATTTATGAAAAACGAGCACAAGACAGAGAGA-AAC  997
      |||  ||||||||||||||||| ||||||||| ||||||||| ||| |||
seq2  GGC--TTTATTTCAAATTTATG-AAAACGAGC-CAAGACAGA-AGAGAAC  988

seq1  TCTACTTCAACAAATAACAATTATTGTTTAAAATTGTTTTAAGTGTTTTG  1047
      ||||||||||| ||||   |||||   ||||||| |||| | |   ||||
seq2  TCTACTTCAAC-AATA--CATTAT--GTTAAAATGGTTTAATG---TTTG  1030

seq1  AGTTGTTTTAATTATCAAAATGGAGATGATC-ATAGGTTTGG  1088
      ||||| ||||||  |||||   ||||||||| ||||| ||||
seq2  AGTTGGTTTAAT--TCAAA--TGAGATGATCGATAGGGTTGG  1068