BAC Information

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BAC

Clone NameB6Ng01-031P11
Chromosome2 (Build37)
Map Location 127,951,269 - 128,011,685
singlet/doubletdoublet
Overlap geneBcl2l11
Upstream geneNcaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl
Downstream geneLOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031P11.bB6Ng01-031P11.g
ACCDH861437DH861438
length853939
definitionDH861437|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P11, 5' end.DH861438|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,010,833 - 128,011,685)(127,951,269 - 127,952,213)
sequence
gaattcttgctaggacggtctcaggaatctgcccacaattatggctccag
tgtgaccctgagagagctatgctttcttctctacatagctcagcaaagca
gcccacaggcctgaaggaagggctccaaccagctcccttctctccattca
gacaggacacccaggaaagcctgtattcagaggaatgcacgatgatctaa
ggagcctggcagctattgtggggcttccacctcaactctgctctgaccct
aaaccactcagagtcctcaacatagccccatgtgtcacttgctctggtgg
agcactggtgaggagcttcagtcggagcagtggtgggagtagtagggcat
aagcaaagagttagggttacagaaggcctgtggtgaactgttaggtccca
cattccacacaatgccatccatgatggtcttgatgttacagaagagcaaa
ccggaggctgacaaatggttatctgtccagccacacaactgatggagaga
gaacagaactcatgcctgccctagcccaggctcattcctctacatcatac
acacctggctcatgggaggtgcctcacaaacatggctgaaaaaagacaaa
tggataaatccatgaaaggaggaatgagcccaccaggcacagccattact
caggataacctgcagaaggatacagaagatatgacaagaagtgtgtcaag
ctgggccagtgggatgggccaggctgggtcacgctggagagaaaaggtca
ttgcagagggtaggaagatgcctcacctaggagaagctgtgcccagaaga
ggtggctgcagtgggaacctggatcttctgcagcaagcctgtgtgtgtgt
gtg
gaattctaggaaaggacagtcaaaggccagtgcccatccttgcaccaatc
taatcctcatggtttggggctgagaagctgtgcaaagcaagggcggaggg
acgccttctgaggcttccaactggcgcccgcggccgggctggacacagag
cagtgtaccctgagcgccccctaagttccgctctgcgaggtggccgccac
gggcggacggggaggggcgggtacattctgagtggaggatgggcgagcat
gcagctgcccgcaggccaagacactagggtaaacacgccggggtgggcgg
cgcacgcaaactgcaggacagccggcggggccaccctccccactacctgt
cgcagcctgcacgcgccagcggcctgggggccgtggggggtggggcttac
cttccggcttgccgggggccggactaaacgggggcggagcccgcggtgat
tgggcgcgggggcgggggctcaactaccgcagagtctcaagagcaggctg
ctttcacttcgctccccgcaggcactgggtcaccagctggttggagctct
gcggtccttgccatcgtcgccgtcaccggattcctgcagccgctctgcga
gctgtgttccacttggattcacaccacctccgctgctcccgccgccaccg
cctcggcgcccttcccctggccctcgtccacccaatgtctgactctgatt
ctcggactgagaaacgcaaggtaaacactccgcgactcccggggcgcagc
tggggatggatagaagacaggcgccgcagcggcttcatctgtctctggtg
tcgcacgtgcgggtggaggcactggtttgtcccgcgtggctgcaggaggc
gaacgctgggaatcgggtcgaggtcgctgcgtgccacgcacttttgggga
gggtgtcggcactgagctcgggcacttagtcgaagactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128010833_128011685
seq2: B6Ng01-031P11.b_45_897 (reverse)

seq1  CACACACACACACAGGCTTGCTGCAGAAGATCCAGGTTCCCACTGCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACAGGCTTGCTGCAGAAGATCCAGGTTCCCACTGCAGCC  50

seq1  ACCTCTTCTGGGCACAGCTTCTCCTAGGTGAGGCATCTTCCTACCCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTCTGGGCACAGCTTCTCCTAGGTGAGGCATCTTCCTACCCTCTG  100

seq1  CAATGACCTTTTCTCTCCAGCCTGACCCAGCCTGGCCCATCCCACTGGCC  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAATGACCTTTTCTCTCCAGCGTGACCCAGCCTGGCCCATCCCACTGGCC  150

seq1  CAGCTTGACACACTTCTTGTCATATCTTCTGTATCCTTCTGCAGGTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGACACACTTCTTGTCATATCTTCTGTATCCTTCTGCAGGTTATC  200

seq1  CTGAGTAATGGCTGTGCCTGGTGGGCTCATTCCTCCTTTCATGGATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAATGGCTGTGCCTGGTGGGCTCATTCCTCCTTTCATGGATTTAT  250

seq1  CCATTTGTCTTTTTTCAGCCATGTTTGTGAGGCACCTCCCATGAGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTCTTTTTTCAGCCATGTTTGTGAGGCACCTCCCATGAGCCAGG  300

seq1  TGTGTATGATGTAGAGGAATGAGCCTGGGCTAGGGCAGGCATGAGTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGATGTAGAGGAATGAGCCTGGGCTAGGGCAGGCATGAGTTCTG  350

seq1  TTCTCTCTCCATCAGTTGTGTGGCTGGACAGATAACCATTTGTCAGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCCATCAGTTGTGTGGCTGGACAGATAACCATTTGTCAGCCTC  400

seq1  CGGTTTGCTCTTCTGTAACATCAAGACCATCATGGATGGCATTGTGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTGCTCTTCTGTAACATCAAGACCATCATGGATGGCATTGTGTGGA  450

seq1  ATGTGGGACCTAACAGTTCACCACAGGCCTTCTGTAACCCTAACTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGACCTAACAGTTCACCACAGGCCTTCTGTAACCCTAACTCTTTG  500

seq1  CTTATGCCCTACTACTCCCACCACTGCTCCGACTGAAGCTCCTCACCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCCCTACTACTCCCACCACTGCTCCGACTGAAGCTCCTCACCAGT  550

seq1  GCTCCACCAGAGCAAGTGACACATGGGGCTATGTTGAGGACTCTGAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCAGAGCAAGTGACACATGGGGCTATGTTGAGGACTCTGAGTGG  600

seq1  TTTAGGGTCAGAGCAGAGTTGAGGTGGAAGCCCCACAATAGCTGCCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGTCAGAGCAGAGTTGAGGTGGAAGCCCCACAATAGCTGCCAGGC  650

seq1  TCCTTAGATCATCGTGCATTCCTCTGAATACAGGCTTTCCTGGGTGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGATCATCGTGCATTCCTCTGAATACAGGCTTTCCTGGGTGTCCT  700

seq1  GTCTGAATGGAGAGAAGGGAGCTGGTTGGAGCCCTTCCTTCAGGCCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATGGAGAGAAGGGAGCTGGTTGGAGCCCTTCCTTCAGGCCTGTG  750

seq1  GGCTGCTTTGCTGAGCTATGTAGAGAAGAAAGCATAGCTCTCTCAGGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTTTGCTGAGCTATGTAGAGAAGAAAGCATAGCTCTCTCAGGGTC  800

seq1  ACACTGGAGCCATAATTGTGGGCAGATTCCTGAGACCGTCCTAGCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGAGCCATAATTGTGGGCAGATTCCTGAGACCGTCCTAGCAAGAA  850

seq1  TTC  853
      |||
seq2  TTC  853

seq1: chr2_127951269_127952213
seq2: B6Ng01-031P11.g_64_1002

seq1  GAATTCTAGGAAAGGACAGTCAAAGGCCAGTGCCCATCCTTGCACCAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAAGGACAGTCAAAGGCCAGTGCCCATCCTTGCACCAATC  50

seq1  TAATCCTCATGGTTTGGGGCTGAGAAGCTGTGCAAAGCAAGGGCGGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTCATGGTTTGGGGCTGAGAAGCTGTGCAAAGCAAGGGCGGAGGG  100

seq1  ACGCCTTCTGAGGCTTCCAACTGGCGCCCGCGGCCGGGCTGGACACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTTCTGAGGCTTCCAACTGGCGCCCGCGGCCGGGCTGGACACAGAG  150

seq1  CAGTGTACCCTGAGCGCCCCCTAAGTTCCGCTCTGCGAGGTGGCCGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACCCTGAGCGCCCCCTAAGTTCCGCTCTGCGAGGTGGCCGCCAC  200

seq1  GGGCGGACGGGGAGGGGCGGGTACATTCTGAGTGGAGGATGGGCGAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGACGGGGAGGGGCGGGTACATTCTGAGTGGAGGATGGGCGAGCAT  250

seq1  GCAGCTGCCCGCAGGCCAAGACACTAGGGTAAACACGCCGGGGTGGGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGCCCGCAGGCCAAGACACTAGGGTAAACACGCCGGGGTGGGCGG  300

seq1  CGCACGCAAACTGCAGGACAGCCGGCGGGGCCACCCTCCCCACTACCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACGCAAACTGCAGGACAGCCGGCGGGGCCACCCTCCCCACTACCTGT  350

seq1  CGCAGCCTGCACGCGCCAGCGGCCTGGGGGCCGTGGGGGGTGGGGCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCCTGCACGCGCCAGCGGCCTGGGGGCCGTGGGGGGTGGGGCTTAC  400

seq1  CTTCCGGCTTGCCGGGGGCCGGACTAAACGGGGGCGGAGCCCGCGGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGGCTTGCCGGGGGCCGGACTAAACGGGGGCGGAGCCCGCGGTGAT  450

seq1  TGGGCGCGGGGGCGGGGGCTCAACTACCGCAGAGTCTCAAGAGCAGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGCGGGGGCGGGGGCTCAACTACCGCAGAGTCTCAAGAGCAGGCTG  500

seq1  CTTTCACTTCGCTCCCCGCAGGCACTGGGTCACCAGCTGGTTGGAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTTCGCTCCCCGCAGGCACTGGGTCACCAGCTGGTTGGAGCTCT  550

seq1  GCGGTCCTTGCCATCGTCGCCGTCACCGGATTCCTGCAGCCGCTCTGCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCCTTGCCATCGTCGCCGTCACCGGATTCCTGCAGCCGCTCTGCGA  600

seq1  GCTGTGTTCCACTTGGATTCACACCACCTCCGCTGCTCCCGCCGCCACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTTCCACTTGGATTCACACCACCTCCGCTGCTCCCGCCGCCACCG  650

seq1  CCTCGGCGCCCTTCCCCTGGCCCTCGTCCACCCAATGTCTGACTCTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCGCCCTTCCCCTGGCCCTCGTCCACCCAATGTCTGACTCTGATT  700

seq1  CTCGGACTGAGAAACGCAAGGTAAACACTCCGCGACTCCCGGGGCGCAGG  750
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCGGACTGAGAAACGCAAGGTAAACACTCCGCGACTCCCGGGGCGCA-G  749

seq1  CTGGGGATGGATAGAAGACAGGCGCCGCAGCGGCTTCATCTGTCTCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGATGGATAGAAGACAGGCGCCGCAGCGGCTTCATCTGTCTCTGGT  799

seq1  GTCGCACGTGCGGGTGGAGGCACTGGTTTGTCCCGCGTGGCTGCAGGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCACGTGCGGGTGGAGGCACTGGTTTGTCCCGCGTGGCTGCAGGAGG  849

seq1  CGAACGCTGGGAGTCGGGTCGAGGTCGCTGCGTGCCAAGGCACTTTTGGG  900
      |||||||||||| ||||||||||||||||||||||| | |||||||||||
seq2  CGAACGCTGGGAATCGGGTCGAGGTCGCTGCGTGCC-ACGCACTTTTGGG  898

seq1  GAAGGGTTGTCGGCACTGAAGCTGCGGGCACTTAGCCGAAGACTG  945
      ||  || ||||||||||| |||| ||||||||||| |||||||||
seq2  GA--GGGTGTCGGCACTG-AGCT-CGGGCACTTAGTCGAAGACTG  939