BAC Information

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BAC

Clone NameB6Ng01-032C08
Chromosome2 (Build37)
Map Location 19,464,922 - 19,627,585
singlet/doubletdoublet
Overlap gene4921504E06Rik, LOC100041244, Otud1, LOC667564
Upstream geneLOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534
Downstream geneLOC100041302, LOC433406, LOC654360, LOC667609, Etl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032C08.bB6Ng01-032C08.g
ACCDH861565DH861566
length972231
definitionDH861565|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C08, 5' end.DH861566|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,626,615 - 19,627,585)(19,464,922 - 19,465,152)
sequence
gaattctgttactgtaacagagtacctggccagtaggtgagtttggccta
tagatatgtgtacttgctagttttgtgtcaacttgacacagctgtagtta
tcacagagaaaggagcttcagttgaggaaatgcctccatgagatccaact
gtaaggcattttctcaattagtgatcaagggggaaaggccccttgtgggt
gggaccatctctgggctggtagtcttgggttctataagagagcaggctga
gcaagccaggtgaggcaagccagtaaagaacatccctccatggcctctgc
atcagctcctgctccctgacctgcttgagttccagtcctgacttcctttg
gtgatgaacatcagtatggaattgtaagccgaataaaccctttcctcccc
aacttgcttcttggtcatgatgtttgtgcagaaatagaaaccctgactaa
gacaatatggaaacagaaaaggcatcaacttcaactccatttctggggaa
tgcatcacacagccttaactcacggcagacaacagtagagtgagtggatg
tatgcagaagacagacttcccttagagaacccactcccctctcatggtaa
ttgaccaacccttcgaatgggagatgtcattcaagaaaggcatcatccca
ctcaagagagctcccttcatgacctaaatgcctcttagtaggccctacct
caacaaagctgcaggtaggaaccatgttttccatgttcttggtgagacag
atcatactgaagtcacagccctgactccttgcctctgcaaactgtcacat
caaaggttaaatttcaccatgagtcattggagaagacattcacgaatagc
agtcttcattctcccagagcatggattccctcaagggtctggagccatct
cttgtttaaggttaagtgaccttgaaacaggcttcaagttccttggtgcc
tcaagaaatattattgctatat
catcctatgactatcaaactctactcctgaaatgttggcagaagccaagc
gtcagcctctgcacatcctttccatggctcaataacagtaagcatcgtaa
atggttaataaggaagctcactttctggacatacttatcagcttgaccaa
acttatcaccaccctttgtttccaaaatatcagctgggggctgtgtggag
ggagggagaaaggaaggaaggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_19626615_19627585
seq2: B6Ng01-032C08.b_45_1016 (reverse)

seq1  ATATAGCAATAATTATTCTTGAGGCACCAAGGAACTTGATGCCTGTTTCA  50
      |||||||||||||  |||||||||||||||||||||||| ||||||||||
seq2  ATATAGCAATAATATTTCTTGAGGCACCAAGGAACTTGAAGCCTGTTTCA  50

seq1  AGGTCACCTTAACCTTAAAACAAGAGATGGCTCAGGACCCTTGAGGGAAT  100
      |||||| ||||||||| ||||||||||||||||  |||||||||||||||
seq2  AGGTCA-CTTAACCTT-AAACAAGAGATGGCTCCAGACCCTTGAGGGAAT  98

seq1  CCATGCTCTGGGAGAATGAAGACTGCTATTCGTGAATGTCTTCTCCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCTGGGAGAATGAAGACTGCTATTCGTGAATGTCTTCTCCAATG  148

seq1  -CTCATGGTGAAATTTAACCTTTGATGTGACAGTTTGCAGAGGCAAGGAG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGGTGAAATTTAACCTTTGATGTGACAGTTTGCAGAGGCAAGGAG  198

seq1  TCAGGGCTGTGACTTCAGTATGATCTGTCTCACCAAGAACATGG-AAACA  248
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAGGGCTGTGACTTCAGTATGATCTGTCTCACCAAGAACATGGAAAACA  248

seq1  TGGTTCCTACCTGCAGCTTTGTTGAGGTAGGGCCTACTAAGAGGCATTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTACCTGCAGCTTTGTTGAGGTAGGGCCTACTAAGAGGCATTTA  298

seq1  GGTCATGAAGGGAGCTCTCTTGAGTGGGATGATGCCTTTCTTGAATGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGAAGGGAGCTCTCTTGAGTGGGATGATGCCTTTCTTGAATGACA  348

seq1  TCTCCCATTCGAAGGGTTGGTCAATTACCATGAGAGGGGAGTGGGTTCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATTCGAAGGGTTGGTCAATTACCATGAGAGGGGAGTGGGTTCTC  398

seq1  TAAGGGAAGTCTGTCTTCTGCATACATCCACTCACTCTACTGTTGTCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAGTCTGTCTTCTGCATACATCCACTCACTCTACTGTTGTCTGC  448

seq1  CGTGAGTTAAGGCTGTGTGATGCATTCCCCAGAAATGGAGTTGAAGTTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGTTAAGGCTGTGTGATGCATTCCCCAGAAATGGAGTTGAAGTTGA  498

seq1  TGCCTTTTCTGTTTCCATATTGTCTTAGTCAGGGTTTCTATTTCTGCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTCTGTTTCCATATTGTCTTAGTCAGGGTTTCTATTTCTGCACA  548

seq1  AACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTA  598

seq1  CAATTCCATACTGATGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCATACTGATGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAA  648

seq1  GCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCAGGGAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTT  698

seq1  ACTGGCTTGCCTCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTGCCTCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAA  748

seq1  GACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGA  798

seq1  TCACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCT  848

seq1  CAACTGAAGCTCCTTTCTCTGTGATAACTACAGCTGTGTCAAGTTGACAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAGCTCCTTTCTCTGTGATAACTACAGCTGTGTCAAGTTGACAC  898

seq1  AAAACTAGCAAGTACACATATCTATAGGCCAAACTCACCTACT-CCCAGG  947
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  AAAACTAGCAAGTACACATATCTATAGGCCAAACTCACCTACTGGCCAGG  948

seq1  TACTCTGTTACAGTAACAGAATTC  971
      ||||||||||||||||||||||||
seq2  TACTCTGTTACAGTAACAGAATTC  972

seq1: chr2_19464922_19465152
seq2: B6Ng01-032C08.g_73_303

seq1  CATCCTATGACTATCAAACTCTACTCCTGAAATGTTGGCAGAAGCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATGACTATCAAACTCTACTCCTGAAATGTTGGCAGAAGCCAAGC  50

seq1  GTCAGCCTCTGCACATCCTTTCCATGGCTCAATAACAGTAAGCATCGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCTCTGCACATCCTTTCCATGGCTCAATAACAGTAAGCATCGTAA  100

seq1  ATGGTTAATAAGGAAGCTCACTTTCTGGACATACTTATCAGCTTGACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAATAAGGAAGCTCACTTTCTGGACATACTTATCAGCTTGACCAA  150

seq1  ACTTATCACCACCCTTTGTTTCCAAAATATCAGCTGGGGGCTGTGTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCACCACCCTTTGTTTCCAAAATATCAGCTGGGGGCTGTGTGGAG  200

seq1  GGAGGGAGAAAGGAAGGAAGGAAGGAAGGAA  231
      |||||||||||||||||||||||||||||||
seq2  GGAGGGAGAAAGGAAGGAAGGAAGGAAGGAA  231