BAC Information

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BAC

Clone NameB6Ng01-032E03
Chromosome2 (Build37)6 (Build37)
Map Location 67,009,509 - 67,010,59258,664,779 - 58,664,928
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTtc21b, Scn1a, LOC100039486, LOC383706, Scn9a, Scn7a, LOC383707, LOC100039540
Downstream geneGm1322, Cmya3, LOC621171, LOC227995, B3galt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E03.bB6Ng01-032E03.g
ACCDH861647DH861648
length1,077473
definitionDH861647|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E03, 5' end.DH861648|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,009,509 - 67,010,592)(58,664,779 - 58,664,928)
sequence
gaattcaatgtgataaataaatttaatatgatatgtagtaaatacattta
gtatatcttcacccatacacgtctaaccaatggatttttatatataagca
gaactattcatcatggaattaaatgagaagttaaatcagtcttcaaatta
ctatatttctgaaatctaatttgagggcttaaattatagagcagctttga
tgtgacttttaaaaagtatttaagtgtgtgataagaagactacaaagtaa
ggctttattataacttggtcacattcagagcttcatattctgatgtgttg
taatattttgcagaaatttagcagaaaagtagataataatgaatacaaca
gatgaatgtaaaaggtttattcactgagcaatttcagaaaaataaaatgc
agtacttatcctagtagcccctgggaacttctcagataaattatgtccag
attctgtcattagttagaagtaatgtcacatgatgaagaaagagaatgca
gtttcatggcactttatcctttcaagtgcttctattaatatctctgcatt
tagtacacctacaaatgaggctcatttggataatcagatacagaggcctg
ttagtgtaaacatgagaatgccacacatgaagttatgtcagaactgattt
tgtgatgaatttcttatgaaaatgttattgtgagaaccaagtcgtcatag
gcaacagtgccttggaagcatcgagcttctctgcttgcccttatgcttgc
ctctgtctctgtgttacattacagtagttaagtcagtcaccctgtttaaa
ggcatgagaagctataatgccctggtgatgctgcagtgacccaactgcta
cagagctgtgctgatctagagaccctgaaaatagaggaggtgagtgtaag
gaaatcagatatgacatctacctaatgaatccatccattaggtattcttt
attcctgaccctgaatgactcttcccacagaagatttagttatactcctt
ttactacaagacccaagacatgtacacaataacatcatgatcgaggttag
gtagccacattttaagaaagacactag
tagaaagactttaatctctttctttatttctttctcaatgaagtgattaa
taagttgagtgtttttcaatttccatgcttatgtggactttctattgttt
ctattgttattgaagtctagtcttaatctgtgttggtatgatagaatcca
aggcattatttcaatattcttgtatcatttgaggtttaaattttgcctga
taatatggtcaattttggagcacgttctgcaagttactaagtagaaggta
tattcttttagtttagggttaagggttctgtggctatctgttaaatcctt
tttttttcaaaacatttgatagtttcattgtttctctgtttagtttctgt
ttcaatgacctgagcattggtgagagtggggtgttgaagtccccatgttt
attgcgtggtgtttaatgtatgatgtgaggtttagtaaagtttcctttac
aaatgtgggtgactttgcatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67009509_67010592
seq2: B6Ng01-032E03.b_48_1124 (reverse)

seq1  CTAGTGTCTTTTCTTTTAAAATGTGGCTACCTAACCTCGATCATGATGTT  50
      ||||||||||   | |||||||||||||||||||||||||||||||||||
seq2  CTAGTGTCTT---TCTTAAAATGTGGCTACCTAACCTCGATCATGATGTT  47

seq1  ATTGTGTTACATGTCTTGGGTCTTTGTAGGTAAAAGGAGTAT-ACTAAAC  99
      |||||| ||||||||||||||| ||||| ||||||||||||| |||||| 
seq2  ATTGTG-TACATGTCTTGGGTC-TTGTA-GTAAAAGGAGTATAACTAAA-  93

seq1  TCTTCTTGTGGGAAGAGTCATTCAGGGTCAGGAATAAAGAATACCTAATG  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTC-TGTGGGAAGAGTCATTCAGGGTCAGGAATAAAGAATACCTAATG  142

seq1  GATGGATTCATTAGGTAGATGTCATATCTGATTTCCTTACACTCACCTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATTCATTAGGTAGATGTCATATCTGATTTCCTTACACTCACCTCC  192

seq1  TCTATTTTCAGGGTCTCTAGATCAGCACAGCTCTGTAGCAGTTGGGTCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTCAGGGTCTCTAGATCAGCACAGCTCTGTAGCAGTTGGGTCAC  242

seq1  TGCAGCATCACCAGGGCATTATAGCTTCTCATGCCTTTAAACAGGGTGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATCACCAGGGCATTATAGCTTCTCATGCCTTTAAACAGGGTGAC  292

seq1  TGACTTAACTACTGTAATGTAACACAGAGACAGAGGCAAGCATAAGGGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAACTACTGTAATGTAACACAGAGACAGAGGCAAGCATAAGGGCA  342

seq1  AGCAGAGAAGCTCGATGCTTCCAAGGCACTGTTGCCTATGACGACTTGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAAGCTCGATGCTTCCAAGGCACTGTTGCCTATGACGACTTGGT  392

seq1  TCTCACAATAACATTTTCATAAGAAATTCATCACAAAATCAGTTCTGACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAATAACATTTTCATAAGAAATTCATCACAAAATCAGTTCTGACA  442

seq1  TAACTTCATGTGTGGCATTCTCATGTTTACACTAACAGGCCTCTGTATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCATGTGTGGCATTCTCATGTTTACACTAACAGGCCTCTGTATCT  492

seq1  GATTATCCAAATGAGCCTCATTTGTAGGTGTACTAAATGCAGAGATATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCCAAATGAGCCTCATTTGTAGGTGTACTAAATGCAGAGATATTA  542

seq1  ATAGAAGCACTTGAAAGGATAAAGTGCCATGAAACTGCATTCTCTTTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCACTTGAAAGGATAAAGTGCCATGAAACTGCATTCTCTTTCTT  592

seq1  CATCATGTGACATTACTTCTAACTAATGACAGAATCTGGACATAATTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTGACATTACTTCTAACTAATGACAGAATCTGGACATAATTTAT  642

seq1  CTGAGAAGTTCCCAGGGGCTACTAGGATAAGTACTGCATTTTATTTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGTTCCCAGGGGCTACTAGGATAAGTACTGCATTTTATTTTTCT  692

seq1  GAAATTGCTCAGTGAATAAACCTTTTACATTCATCTGTTGTATTCATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCTCAGTGAATAAACCTTTTACATTCATCTGTTGTATTCATTAT  742

seq1  TATCTACTTTTCTGCTAAATTTCTGCAAAATATTACAACACATCAGAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTTTTCTGCTAAATTTCTGCAAAATATTACAACACATCAGAATA  792

seq1  TGAAGCTCTGAATGTGACCAAGTTATAATAAAGCCTTACTTTGTAGTCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCTGAATGTGACCAAGTTATAATAAAGCCTTACTTTGTAGTCTT  842

seq1  CTTATCACACACTTAAATACTTTTTAAAAGTCACATCAAAGCTGCTCTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCACACACTTAAATACTTTTTAAAAGTCACATCAAAGCTGCTCTAT  892

seq1  AATTTAAGCCCTCAAATTAGATTTCAGAAATATAGTAATTTGAAGACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAGCCCTCAAATTAGATTTCAGAAATATAGTAATTTGAAGACTGA  942

seq1  TTTAACTTCTCATTTAATTCCATGATGAATAGTTCTGCTTATATATAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTCTCATTTAATTCCATGATGAATAGTTCTGCTTATATATAAAA  992

seq1  ATCCATTGGTTAGACGTGTATGGGTGAAGATATACTAAATGTATTTACTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGGTTAGACGTGTATGGGTGAAGATATACTAAATGTATTTACTA  1042

seq1  CATATCATATTAAATTTATTTATCACATTGAATTC  1084
      |||||||||||||||||||||||||||||||||||
seq2  CATATCATATTAAATTTATTTATCACATTGAATTC  1077

seq1: chr6_58664779_58664928
seq2: B6Ng01-032E03.g_275_425 (reverse)

seq1  GAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGAAGTTATG-AAA  49
      |||||||||||||||||| || ||| |||||||| || | ||| || |||
seq2  GAAACAGAAACTAAACAGAGAAACAATGAAACTATCAAATGTTTTGAAAA  50

seq1  CAAATGGACCTGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGG  99
       ||| |||  | ||||||| | |||||||  || | ||||||  ||||| 
seq2  AAAAAGGATTTAACAGATAGCCACAGAACCCTTAACCCTAAACTAAAAGA  100

seq1  ATATACCTTCTTCTCAGCACCTCATGGAACCTTCTCCAAAATTGACCATA  149
      ||||||||||| || || | ||    |||| | |||||||||||||||||
seq2  ATATACCTTCTACTTAGTAACTTGCAGAACGTGCTCCAAAATTGACCATA  150

seq1  T  150
      |
seq2  T  151