BAC Information

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BAC

Clone NameB6Ng01-032E16
Chromosome2 (Build37)
Map Location 40,802,917 - 40,804,011
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E16.bB6Ng01-032E16.g
ACCDH861673DH861674
length4321,083
definitionDH861673|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E16, 5' end.DH861674|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgttggcaggagcctgacatagctgtctccttagagcctctttcagagc
ctggcaagtatagacgaggatgctagccaccaaccattgaactgagcata
ggatctccaatggaggagttggcgaaaggaatgaaggagctgaggggttt
gcaacacataggaaaaacaacaatatcaaccacgcagacccctccccccg
atctcccaggactaaaccaccaaccacagtgtacacatggagtgtcctat
ggcttgagccccatatgtaggagaggatggccttgaaggacatcaatggg
aagaaaggtctttggcctgggaaggctccatgctccattgtaggggaatg
ccagggccagggggtgggagtgggtggacagttgggtgagcatcctcata
gaagcaggtggagagaggatgggttggagggt

gaattctataaagttcttactgaatttgttaatctgtaaattctgatgtt
gtaaaggacatcataggtttatttatatttctgatattacatggacatac
ttcagaaccatgtaaggtattagctcatccttaatatgtctctcaccctg
acagtcagtttattccacaattttctttctggaataactcttgactttca
tttcccaatttatataacaacaacttttacttctgaaatacgtagtttca
ttatttttaaaatcaaatttgtaaatagagaaatatactttgttttgtaa
tactgcagatagaagcaggattttcaaaggcttgtgtataattgaacctg
aaaattctgccgaacctagatgcagttaaagcaaatatttcatagatatg
tatatcctaaaagtattggttatttcaaagtttttgaaattatatcctta
aaagtatcactaacttagtttatctaaaatatatgaaattgatattattc
tagggtacttcattttcagagaaaaagttgaacagaaaaaccgttgtttt
tcatttgtattttaacctcagattctaaattggaaaaaaaaaaagtagcc
agaaaaaaattccaaagagaagagagattagaggtaagacaatgcacaca
ctggcatggctacttagttatagtcattaaaccttaggtcacagatattt
tagtttcttttaaatgtctttttttttcctgctagtttgaacaactatta
catataagttgtttactgaagctgagtagccaaatctggtttgttgggaa
ctattagagtttagtttttgttcgtttgttgtttttgtttttttcttgtt
tttttttttttttttagatattttcttcatttacattcaaatggtaatac
caaagtcccctataccaccccccctcctgccctgccctgctcaacaaccc
acccaatctggtttcctggacttgcattcccctgtactgggcagtatctt
ctaactttacttattctggttacgagctagtggaaaacgccatcgttaaa
aatcaggaagagaatggatgccaaatttcccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40802917_40804011
seq2: B6Ng01-032E16.g_69_1151

seq1  GAATTCTATAAAGTTCTTACTGAATTTGTTAATCTGTAAATTCTGATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAAGTTCTTACTGAATTTGTTAATCTGTAAATTCTGATGTT  50

seq1  GTAAAGGACATCATAGGTTTATTTATATTTCTGATATTACATGGACATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGACATCATAGGTTTATTTATATTTCTGATATTACATGGACATAC  100

seq1  TTCAGAACCATGTAAGGTATTAGCTCATCCTTAATATGTCTCTCACCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACCATGTAAGGTATTAGCTCATCCTTAATATGTCTCTCACCCTG  150

seq1  ACAGTCAGTTTATTCCACAATTTTCTTTCTGGAATAACTCTTGACTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGTTTATTCCACAATTTTCTTTCTGGAATAACTCTTGACTTTCA  200

seq1  TTTCCCAATTTATATAACAACAACTTTTACTTCTGAAATACGTAGTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATTTATATAACAACAACTTTTACTTCTGAAATACGTAGTTTCA  250

seq1  TTATTTTTAAAATCAAATTTGTAAATAGAGAAATATACTTTGTTTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAAAATCAAATTTGTAAATAGAGAAATATACTTTGTTTTGTAA  300

seq1  TACTGCAGATAGAAGCAGGATTTTCAAAGGCTTGTGTATAATTGAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGATAGAAGCAGGATTTTCAAAGGCTTGTGTATAATTGAACCTG  350

seq1  AAAATTCTGCCGAACCTAGATGCAGTTAAAGCAAATATTTCATAGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTGCCGAACCTAGATGCAGTTAAAGCAAATATTTCATAGATATG  400

seq1  TATATCCTAAAAGTATTGGTTATTTCAAAGTTTTTGAAATTATATCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTAAAAGTATTGGTTATTTCAAAGTTTTTGAAATTATATCCTTA  450

seq1  AAAGTATCACTAACTTAGTTTATCTAAAATATATGAAATTGATATTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCACTAACTTAGTTTATCTAAAATATATGAAATTGATATTATTC  500

seq1  TAGGGTACTTCATTTTCAGAGAAAAAGTTGAACAGAAAAACCGTTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTACTTCATTTTCAGAGAAAAAGTTGAACAGAAAAACCGTTGTTTT  550

seq1  TCATTTGTATTTTAACCTCAGATTCTAAATTGGAAAAAAAAAAAGTAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTATTTTAACCTCAGATTCTAAATTGGAAAAAAAAAAAGTAGCC  600

seq1  AGAAAAAAATTCCAAAGAGAAGAGAGATTAGAGGTAAGACAATGCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAATTCCAAAGAGAAGAGAGATTAGAGGTAAGACAATGCACACA  650

seq1  CTGGCATGGCTACTTAGTTATAGTCATTAAACCTTAGGTCACAGATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATGGCTACTTAGTTATAGTCATTAAACCTTAGGTCACAGATATTT  700

seq1  TAGTTTCTTTTAAATGTCTTTTTTTTTCCTGCTAGTTTGAACAACTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTTTAAATGTCTTTTTTTTTCCTGCTAGTTTGAACAACTATTA  750

seq1  CATATAAGTTGTTTACTGAAGCTGAGTAGCCAAATCTGGTTTGTTGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAGTTGTTTACTGAAGCTGAGTAGCCAAATCTGGTTTGTTGGGAA  800

seq1  CTATTAGAGTTTAGTTTTTGTTCGTTTGTTGTTTTTGTTTTTTTCTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGAGTTTAGTTTTTGTTCGTTTGTTGTTTTTGTTTTTTTCTTGTT  850

seq1  TTTTTTTTTTTTTTTAGATATTTTCTTCATTTACATTTCAAATGGT-ATA  899
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  TTTTTTTTTTTTTTTAGATATTTTCTTCATTTACA-TTCAAATGGTAATA  899

seq1  CCAAAAGTCCCCTATACCACCCCCCCTCCTGCCCTGCCCTGCTCCACAAC  949
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CC-AAAGTCCCCTATACCACCCCCCCTCCTGCCCTGCCCTGCTCAACAAC  948

seq1  CCACCCACTCTGGTTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCATGT  999
      ||||||| |||||||||||||  || ||||||||||||||| ||||| ||
seq2  CCACCCAATCTGGTTTCCTGG-ACTTGCATTCCCCTGTACT-GGGCA-GT  995

seq1  AATCTTTCTAACTTTACTTATTCTGTTTACAGAGCTATGTGGAGAACAGG  1049
       ||| |||||||||||||||||||| |||| |||||| ||||| |||  |
seq2  -ATC-TTCTAACTTTACTTATTCTGGTTAC-GAGCTA-GTGGAAAAC--G  1039

seq1  CCATTGTTAAGAGATCAGGAAGAGAATGGATGCTCAATTTTCCCTA  1095
      |||| ||||| | |||||||||||||||||||| ||| ||||||||
seq2  CCATCGTTAA-AAATCAGGAAGAGAATGGATGC-CAAATTTCCCTA  1083


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