BAC Information

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BAC

Clone NameB6Ng01-032I22
Chromosome2 (Build37)
Map Location 43,419,180 - 43,420,329
singlet/doubletsinglet
Overlap geneKynu
Upstream geneLrp1b, LOC100041228, LOC100041245
Downstream geneArhgap15, Gtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I22.bB6Ng01-032I22.g
ACCDH861856DH861857
length1,1401,154
definitionDH861856|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I22, 5' end.DH861857|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagagaaaaccacacacagaatgagaattcaagaatggagttg
gaattgatccgcatgaaggataccaccctgcttcatctaagataggcgac
actggtctcacctaaggctgtgattaaataattctgggaccagacctgag
aaacagaatttctagtaaagtccccattcaccctcagtctgccgtggagg
aaaccatgctttgtcttgataagctagaattgtttaccttctaaaactcc
atttattttaacaaatttattgaatcaatttattgtccctctttttattt
cctttaagaattagcaatgagttaaccaaataagtctgctggactgaaac
tcaaagagaaatataaaagaaatatctatatctatatatctatatctatc
tatctatctatatatataatgctgatttttaaaaggagcatttattttga
aaattaaactattttaaaaatgtaaaaagtgtatgtatgaatacaggtgt
ccatataggccagaggtcttgaattcccctggaactggaattatagacag
ttgtgaataatctgatatgtatgcttgggattgaactctgatcttctgga
agggcagtatgtgttcttaatcattgagcaaaaacatttccaatcccaga
aatttctacctgtaacgcaggggaaagcaatatgctaaaatctacacact
gcaatttaacatctcatctatttttaagtgtacattctgagggaagtgta
tccatcttatgacacctggtttacactcctctttcttctttctagaatta
tgtctggtgctagattcagcagtcacacaggaatgcatcccccaggtgtc
acatttcccagggggcttcatccagtgtaagccaagtgaggctatgtgac
cccatcctaccctgaaatagtgtgagtggagctatcagattctgagtatt
tgaaattgaaggaaaagtcaaggaagttggactgtataaatcctgtgaaa
ctacttttgtaattcattccagctaatcttgtcttttcactgatgggaag
cacagagccacatagacgctttcaagttttctttgttctgtggctttgat
taaaaaaaggagttttccaacagaaagtcaggtcaggttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatatactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcacagggctccc
atggaggagctagagaagtatcaaggagctaaagggatcttcaccctata
gtggaacaacattatgaactaaccagtaccctgagctctgactctagctg
ctatgtatcaaagaatgcctagtcgcatacttgaaaagagcattggaccc
agacttgtgtgtctcgtacaggtacgctaggccaagagggaagatgggag
gata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43419180_43420329
seq2: B6Ng01-032I22.b_44_1183 (reverse)

seq1  CAACGTGACCTGAACCCTTCTGTTTGGGGAAAACTCCTATTTTTAATCAT  50
      |||| ||||||||  | |||||||   ||||||||||| |||||||||| 
seq2  CAACCTGACCTGA--CTTTCTGTT---GGAAAACTCCTTTTTTTAATCAA  45

seq1  AG-CACAGGAACAAAGAAAAACTGTGAAGCGTCCTATGTTGGGCTCTGTT  99
      || |||| |||||||| ||||||   |||||| ||||||  ||||||| |
seq2  AGCCACA-GAACAAAG-AAAACTTGAAAGCGT-CTATGT--GGCTCTG-T  89

seq1  GCTTCCCATCAGTGAAAAGACAAGATTAGCTGGAATGAATTAC-AGAGTA  148
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  GCTTCCCATCAGTGAAAAGACAAGATTAGCTGGAATGAATTACAAAAGTA  139

seq1  GTTTCACAGGATTTATACAGTCCAACTTCCTTGACTTTTTCCTTCAATTT  198
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTTCACAGGATTTATACAGTCCAACTTCCTTGAC-TTTTCCTTCAATTT  188

seq1  CAAATACTCAGAATCTGATAGCTCCACTCACACTATTTCAGGGTAGGATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTCAGAATCTGATAGCTCCACTCACACTATTTCAGGGTAGGATG  238

seq1  GGGTCACATAGCCTCACTTGGCTTACACTGGATGAAGCCCCCTGGGAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACATAGCCTCACTTGGCTTACACTGGATGAAGCCCCCTGGGAAAT  288

seq1  GTGACACCTGGGGGATGCATTCCTGTGTGACTGCTGAATCTAGCACCAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACCTGGGGGATGCATTCCTGTGTGACTGCTGAATCTAGCACCAGA  338

seq1  CATAATTCTAGAAAGAAGAAAGAGGAGTGTAAACCAGGTGTCATAAGATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTCTAGAAAGAAGAAAGAGGAGTGTAAACCAGGTGTCATAAGATG  388

seq1  GATACACTTCCCTCAGAATGTACACTTAAAAATAGATGAGATGTTAAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACTTCCCTCAGAATGTACACTTAAAAATAGATGAGATGTTAAATT  438

seq1  GCAGTGTGTAGATTTTAGCATATTGCTTTCCCCTGCGTTACAGGTAGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGTAGATTTTAGCATATTGCTTTCCCCTGCGTTACAGGTAGAAA  488

seq1  TTTCTGGGATTGGAAATGTTTTTGCTCAATGATTAAGAACACATACTGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGATTGGAAATGTTTTTGCTCAATGATTAAGAACACATACTGCC  538

seq1  CTTCCAGAAGATCAGAGTTCAATCCCAAGCATACATATCAGATTATTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAAGATCAGAGTTCAATCCCAAGCATACATATCAGATTATTCAC  588

seq1  AACTGTCTATAATTCCAGTTCCAGGGGAATTCAAGACCTCTGGCCTATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTATAATTCCAGTTCCAGGGGAATTCAAGACCTCTGGCCTATAT  638

seq1  GGACACCTGTATTCATACATACACTTTTTACATTTTTAAAATAGTTTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTGTATTCATACATACACTTTTTACATTTTTAAAATAGTTTAAT  688

seq1  TTTCAAAATAAATGCTCCTTTTAAAAATCAGCATTATATATATAGATAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATAAATGCTCCTTTTAAAAATCAGCATTATATATATAGATAGA  738

seq1  TAGATAGATATAGATATATAGATATAGATATTTCTTTTATATTTCTCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATATAGATATATAGATATAGATATTTCTTTTATATTTCTCTTT  788

seq1  GAGTTTCAGTCCAGCAGACTTATTTGGTTAACTCATTGCTAATTCTTAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAGTCCAGCAGACTTATTTGGTTAACTCATTGCTAATTCTTAAA  838

seq1  GGAAATAAAAAGAGGGACAATAAATTGATTCAATAAATTTGTTAAAATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAAAAAGAGGGACAATAAATTGATTCAATAAATTTGTTAAAATAA  888

seq1  ATGGAGTTTTAGAAGGTAAACAATTCTAGCTTATCAAGACAAAGCATGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTTTTAGAAGGTAAACAATTCTAGCTTATCAAGACAAAGCATGGT  938

seq1  TTCCTCCACGGCAGACTGAGGGTGAATGGGGACTTTACTAGAAATTCTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCACGGCAGACTGAGGGTGAATGGGGACTTTACTAGAAATTCTGT  988

seq1  TTCTCAGGTCTGGTCCCAGAATTATTTAATCACAGCCTTAGGTGAGACCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGTCTGGTCCCAGAATTATTTAATCACAGCCTTAGGTGAGACCA  1038

seq1  GTGTCGCCTATCTTAGATGAAGCAGGGTGGTATCCTTCATGCGGATCAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGCCTATCTTAGATGAAGCAGGGTGGTATCCTTCATGCGGATCAAT  1088

seq1  TCCAACTCCATTCTTGAATTCTCATTCTGTGTGTGGTTTTCTCTAAGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCCATTCTTGAATTCTCATTCTGTGTGTGGTTTTCTCTAAGAAT  1138

seq1  TC  1150
      ||
seq2  TC  1140