BAC Information

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BAC

Clone NameB6Ng01-032L07
Chromosome2 (Build37)
Map Location 178,444,619 - 178,602,733
singlet/doubletdoublet
Overlap geneLOC100039368
Upstream geneLOC100039233, LOC626802, LOC329575, LOC433515, LOC665205, OTTMUSG00000016327, LOC100039263, LOC626848, 2810021G02Rik, Phactr3, Sycp2, Ppp1r3d, 9030418K01Rik, Cdh26
Downstream geneLOC665264, LOC100043168, LOC100039413, Cdh4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032L07.bB6Ng01-032L07.g
ACCDH861958DH861959
length863499
definitionDH861958|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L07, 5' end.DH861959|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(178,602,036 - 178,602,733)(178,444,619 - 178,445,123)
sequence
gaattcagggaccagcacctacattaggcagctcataactaactgtaact
ccagatctgggagatccgatgtccccctgacacatacatacacatgcaca
catcatgcacacacagatactcacatgtgcactcatgcacacacacacac
acacacacacacacacacacacacacactttaaaatatagaaaaataccc
tggagagatggcttcataattaagggacttgaatttggctcccagcacct
agttgggctcctcataaccacttataaccccagttttaagggttctgatt
tcttattctggcctctgcaggcatctgcatgtatttagaacacacagaga
gaaacatataaatattattttaaaaaacattttaaagagcattaatgaga
tatttttgcattctttatttttgttctgtttttagcatcccacgggcatt
ttatactaagcactacttctcagttcagaatagctcggttcacatttcaa
gagcccacagtggccttacatgccttatggctcctatgctggatgccatt
tgggaaaataaagtagaaggaaaggttttagggtcaaggtttcggaactg
cctttggggactgcaagtctgcactccgaagttcacagacagagggaaat
gtaaaaaatggagttggatgtagaacttcaaggatctgagcagacacagg
gaaagagacagtcttgggagctgttcctatggctggtgctgaagccagga
gagactggccaagtcagcaaggaggagtcatcttaggagtcaggacaccc
aacatcaagagcagattttccactgcatgttggaccacgccaccccctaa
ggatgttcagccc
tgaattatcttctcagtggtacatgaaacaactgtctgtcacccaaaggc
agcagggggcagggggagatgatggattcctaaggtaaaaatctaggagg
gaatgcatttcactccacaggcagctcccccacaacaggtcccaaggcca
aggctgactgggagagtgggggccatcccccaggcccaccttggggcttt
aggaaactttcattcattggttcctgcagaggtccaagatcaaggatgct
ctggtgtggatgcagaactccagaacgatgcatggaggggaagctggtgg
tcacacagcactggggtgaggccatggaggggaagccagtggtcggcacc
aggatgaggccttatgaaatattcagcagctagctgcagcaggctactca
caaggactgcacgcttctgaccaaatctccacagttgaccttgtagtttt
tataggaagctttgaaagttctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_178602036_178602733
seq2: B6Ng01-032L07.b_45_742 (reverse)

seq1  TGTGTCTGCTCAGATCCTTGAAGTTCTACATCCAACTCCATTTTTTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGCTCAGATCCTTGAAGTTCTACATCCAACTCCATTTTTTACAT  50

seq1  TTCCCTCTGTCTGTGAACTTCGGAGTGCAGACTTGCAGTCCCCAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTGTCTGTGAACTTCGGAGTGCAGACTTGCAGTCCCCAAAGGCA  100

seq1  GTTCCGAAACCTTGACCCTAAAACCTTTCCTTCTACTTTATTTTCCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGAAACCTTGACCCTAAAACCTTTCCTTCTACTTTATTTTCCCAAA  150

seq1  TGGCATCCAGCATAGGAGCCATAAGGCATGTAAGGCCACTGTGGGCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCAGCATAGGAGCCATAAGGCATGTAAGGCCACTGTGGGCTCTT  200

seq1  GAAATGTGAACCGAGCTATTCTGAACTGAGAAGTAGTGCTTAGTATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGAACCGAGCTATTCTGAACTGAGAAGTAGTGCTTAGTATAAAA  250

seq1  TGCCCGTGGGATGCTAAAAACAGAACAAAAATAAAGAATGCAAAAATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGTGGGATGCTAAAAACAGAACAAAAATAAAGAATGCAAAAATATC  300

seq1  TCATTAATGCTCTTTAAAATGTTTTTTAAAATAATATTTATATGTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATGCTCTTTAAAATGTTTTTTAAAATAATATTTATATGTTTCTC  350

seq1  TCTGTGTGTTCTAAATACATGCAGATGCCTGCAGAGGCCAGAATAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTCTAAATACATGCAGATGCCTGCAGAGGCCAGAATAAGAAA  400

seq1  TCAGAACCCTTAAAACTGGGGTTATAAGTGGTTATGAGGAGCCCAACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACCCTTAAAACTGGGGTTATAAGTGGTTATGAGGAGCCCAACTAG  450

seq1  GTGCTGGGAGCCAAATTCAAGTCCCTTAATTATGAAGCCATCTCTCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGAGCCAAATTCAAGTCCCTTAATTATGAAGCCATCTCTCCAGG  500

seq1  GTATTTTTCTATATTTTAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTCTATATTTTAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550

seq1  GTGTGTGTGTGCATGAGTGCACATGTGAGTATCTGTGTGTGCATGATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGCATGAGTGCACATGTGAGTATCTGTGTGTGCATGATGTG  600

seq1  TGCATGTGTATGTATGTGTCAGGGGGACATCGGATCTCCCAGATCTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTATGTATGTGTCAGGGGGACATCGGATCTCCCAGATCTGGAG  650

seq1  TTACAGTTAGTTATGAGCTGCCTAATGTAGGTGCTGGTCCCTGAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTAGTTATGAGCTGCCTAATGTAGGTGCTGGTCCCTGAATTC  698

seq1: chr2_178444619_178445123
seq2: B6Ng01-032L07.g_70_574

seq1  GAATTCTGAATTATCTTCTCAGTGGTACATGAAACAACTGTCTGTCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATTATCTTCTCAGTGGTACATGAAACAACTGTCTGTCACCC  50

seq1  AAAGGCAGCAGGGGGCAGGGGGAGATGATGGATTCCTAAGGTAAAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGCAGGGGGCAGGGGGAGATGATGGATTCCTAAGGTAAAAATCT  100

seq1  AGGAGGGAATGCATTTCACTCCACAGGCAGCTCCCCCACAACAGGTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGAATGCATTTCACTCCACAGGCAGCTCCCCCACAACAGGTCCCA  150

seq1  AGGCCAAGGCTGACTGGGAGAGTGGGGGCCATCCCCCAGGCCCACCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAGGCTGACTGGGAGAGTGGGGGCCATCCCCCAGGCCCACCTTGG  200

seq1  GGCTTTAGGAAACTTTCATTCATTGGTTCCTGCAGAGGTCCAAGATCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAGGAAACTTTCATTCATTGGTTCCTGCAGAGGTCCAAGATCAAG  250

seq1  GATGCTCTGGTGTGGATGCAGAACTCCAGAACGATGCATGGAGGGGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTGGTGTGGATGCAGAACTCCAGAACGATGCATGGAGGGGAAGC  300

seq1  TGGTGGTCACACAGCACTGGGGTGAGGCCATGGAGGGGAAGCCAGTGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCACACAGCACTGGGGTGAGGCCATGGAGGGGAAGCCAGTGGTC  350

seq1  GGCACCAGGATGAGGCCTTATGAAATATTCAGCAGCTAGCTGCAGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCAGGATGAGGCCTTATGAAATATTCAGCAGCTAGCTGCAGCAGGC  400

seq1  TACTCACAAGGACTGCACGCTTCTGACCAAATCTCCACAGTTGACCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACAAGGACTGCACGCTTCTGACCAAATCTCCACAGTTGACCTTGT  450

seq1  AGTTTTTATAGGAAGCTTTGAAAGTTCTCTCTCTCTCTCTCTCTCTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTATAGGAAGCTTTGAAAGTTCTCTCTCTCTCTCTCTCTCTCTCT  500

seq1  CTCTC  505
      |||||
seq2  CTCTC  505