BAC Information

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BAC

Clone NameB6Ng01-032M03
Chromosome2 (Build37)1 (Build37)
Map Location 142,776,355 - 142,776,896103,359,501 - 103,359,881
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032M03.bB6Ng01-032M03.g
ACCDH861998DH861999
length884373
definitionDH861998|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M03, 5' end.DH861999|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,355 - 142,776,896)(103,359,501 - 103,359,881)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaaatccaccttcttgagttctttatatatgttggatcttagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttatcaattctcaatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccatagtacaaggagataagtatggatcaattcgc
attcttgtacatgataacaaacagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccattaccatgcagtttttatcacaattgc
tctgtattaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggctttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgtgttggaatttt
gatggggatgcattgaatctgtagattgctttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcgttccatctt
ctgaaatcttctttaatttctatcttcagagact
taggactgactaaggaaagatgtgaaacacatttcattacaatgtaagcc
tctatacaatacagcactgttgtcagcagggagtacagtcttctccagag
aaacacaccttgtaagcttctttgggtaggatttagggtaaagctggggg
actactaaacccacacattattttatgatagactacatgtggcaaagaac
acttcacttatttatcatgtgtatatgcagagttgaaaaggagttgaagt
tttaacgtgaaggtgtttctcggttgttaagtatgtgtaatatatatata
tgtatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatctatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776355_142776896
seq2: B6Ng01-032M03.b_386_927 (reverse)

seq1  AGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAGGATCTC  50
      |||||||||||| |||||||||||||||| ||||||||||||| ||||||
seq2  AGTCTCTGAAGATAGAAATTAAAGAAGATTTCAGAAGATGGAACGATCTC  50

seq1  CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCC  100

seq1  -AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAA  149
       |||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  AAAAAGCAATCTACAGATTCAATGC-ATCCCCATCAAAATTCCAACACAA  149

seq1  TTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAA  199

seq1  AAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTG  249
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAGCCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTG  249

seq1  GAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAA  299
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATCACCATGCCTGACCTAAAGCTTTAATACAGAGCAATTGTGATAAAA  299

seq1  ACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAAT  349
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGGTAATGGTATAGAGACAGACAAGTAGACCAATGGAATAGAAT  349

seq1  TGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACA  399

seq1  AGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGG  449
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGG  449

seq1  TGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATA  499
      |||||||||||||| ||||||||||||| ||||||| |||| ||||||||
seq2  TGCTGGCACAACTGTTTGTTATCATGTACAAGAATGCGAATTGATCCATA  499

seq1  CTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  542
      ||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTATCTCCTTGTACTATGGTCAAATCTAAGTGGATCAAGGAA  542

seq1: chr1_103359501_103359881
seq2: B6Ng01-032M03.g_68_446 (reverse)

seq1  ATATATATACATATATATGTGTATATATACATATATATATGTATATATAT  50
      ||||||||| |||||||  | |||||||| |||||||||| |||||||||
seq2  ATATATATAGATATATA--TATATATATATATATATATATATATATATAT  48

seq1  ATATATATATATATATATATATACATATATATATATTACACATACTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATACATATATATATATTACACATACTTAAC  98

seq1  AACCGAGAAACACCTTCACGTTAAAACTTCAACTCCTTTTCAACTCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAGAAACACCTTCACGTTAAAACTTCAACTCCTTTTCAACTCTGCA  148

seq1  TATACACATGATAAATAAGTGAAGTGTTCTTTGCCACATGTAGTCTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACATGATAAATAAGTGAAGTGTTCTTTGCCACATGTAGTCTATCA  198

seq1  TAAAATAATGTGTGGGTTTAGTAGTCCCCCAGCTTTACCCTAAATCCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATGTGTGGGTTTAGTAGTCCCCCAGCTTTACCCTAAATCCTAC  248

seq1  CCAAAGAAGCTTACAAGGTGTGTTTCTCTGGAGAAGACTGTACTCCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAGCTTACAAGGTGTGTTTCTCTGGAGAAGACTGTACTCCCTGC  298

seq1  TGACAACAGTGCTGTATTGTATAGAGGCTTACATTGTAATGAAATGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACAGTGCTGTATTGTATAGAGGCTTACATTGTAATGAAATGTGTT  348

seq1  TCACATCTTTCCTTAGTCAGTCCTAGAATTC  381
      |||||||||||||||||||||||||||||||
seq2  TCACATCTTTCCTTAGTCAGTCCTAGAATTC  379