BAC Information

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BAC

Clone NameB6Ng01-032O02
Chromosome2 (Build37)
Map Location 152,574,550 - 152,575,009
singlet/doubletsinglet
Overlap genenone
Upstream geneRspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170
Downstream geneCox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032O02.b
ACCDH862089
length474
definitionDH862089|Mus musculus domesticus DNA, BAC clone: B6Ng01-032O02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caacaaggaattcttgcctgtctttttcccaactgctgggattaaaggtg
agccccaccatgccaggctacaattacgactcataggccagaaggtctct
aaagaatgaaattataaaataatttgaaactgaactaattacataaaaca
acataagccgggcagtggtggcacatgcctttaatcccagcacttgggag
gcagaggtaggcagatttctgagtttgaggccagtctggtctacagagtg
agttccaggacagccagggctacacagagaaaaactgtctcgaaaaacaa
aacaaaaataaataaataggggctggagagatggctcagtggttaagagc
actaactgcttttccagaggttctgagttcaaatcccagcaaccacatgg
tggctcacaaccatccgtaatgagatctgacgccctcttctggtgtgtct
gaagacagctacagtgtatatgga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152574550_152575009
seq2: B6Ng01-032O02.b_15_474

seq1  TGCCTGTCTGTTTCCCAACAGCTGGGATTAAAGGTGAGCCCCACCATGCC  50
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  TGCCTGTCTTTTTCCCAACTGCTGGGATTAAAGGTGAGCCCCACCATGCC  50

seq1  AGGCTACAATTACGACTCATAGGCCAGAAGGTCTCTAAAGAATGAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACAATTACGACTCATAGGCCAGAAGGTCTCTAAAGAATGAAATTA  100

seq1  TAAAATAATTTGAAACTGAACTAATTACATAAAACAACATAAGCCGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATTTGAAACTGAACTAATTACATAAAACAACATAAGCCGGGCA  150

seq1  GTGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGCAG  200

seq1  ATTTCTGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGGACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTCCAGGACAGC  250

seq1  CAGGGCTACACAGAGAAAAACTGTCTCGAAAAACAAAACAAAAATAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACACAGAGAAAAACTGTCTCGAAAAACAAAACAAAAATAAATA  300

seq1  AATAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTAACTGCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTAACTGCTTTTC  350

seq1  CAGAGGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTTCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAT  400

seq1  CCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAG  450

seq1  TGTATATGGA  460
      ||||||||||
seq2  TGTATATGGA  460