BAC Information

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BAC

Clone NameB6Ng01-033I22
Chromosome2 (Build37)
Map Location 73,196,208 - 73,329,166
singlet/doubletdoublet
Overlap geneGpr155, Wipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033I22.bB6Ng01-033I22.g
ACCDH862572DH862573
length1,116743
definitionDH862572|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I22, 5' end.DH862573|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,328,042 - 73,329,166)(73,196,208 - 73,196,948)
sequence
gaattccttcctcccacccctagtcataccaatgtttaaaagattgacaa
ctacttcattttcagaaatgagaagtttacagggtccaagtcctctgact
tcttagctgtccattaggaaagtcagacttctggctgcttttctcagttg
aattccttagctctttagaggatgtgttagcattcctgtgatcctgcctc
attctagagcagataccttagctggtcactctagtaatgaggcgtgaggt
agtcagaaacaccttgggcaacttctctcctgtagatcctgtagcaggtt
gtcctagtgtctgtgggcctcagagcctaaagtttgacattccccccccc
cccccccaggatggtcttggctgtgtcccagctttggtttcctggatgcc
tctactccacactattggttagaactatagtttaccctccatacaggaag
ggaggaagtcagtggggagcttgcagtctgccctctgccctctgatagca
tttctagagcctggtgtagtggcactccagtcttcagaaagctgagaccg
gaggattgcaaatttgagcccagtctgggcttcatagcaagactctatcc
tatccctcatatacctccaaagagaacagtttcaagtgctctgtaatgtc
acccttagctctgccattattgttactaacatgaagctatatttcctgta
aacggcgactttaccgctaccagggtcctgctgacagtgctctatcactg
actcagaaaggccacttgcatttaatatctagagaaatgtataggtagga
tttctaaaccattaaaattgaatgcacgtattcacggtcaagattagagg
atattataataataaaaagcatgttcagtcagcaaaaattaagaaaaagg
ggaaacaaaaaatataataatatgtatactaaaatggaaacaatgtgagc
agattaagttctaataaaaccattgggtctcaagaaaataaacagatgat
ggagatgtaattcagtggtaaagcactttctacatgactgaagctctgtg
tcaactcccagcatggggaaaagcaaaacacttgctgctgttgctactct
cagaatgtgtgtcagt
gaattctcagctcctcctgcaccatgcctgcttggatgctgccatgttcc
cactttgacgataatggactgaacctctgaacctgtaagccagccccaat
taaatgttgtcctttgtaagacttgccttggtcatggtgtctgtccacag
cagtaaaacccaactaagacaatcaattttaaaaggaacatcatcaagag
gcttggaagaataaaattctgatgacatcaccacagattgtcagtgagcc
tgggtttaagggctatgcagtaaaagcaggaaggagagagaggacacaag
ggccagtctggggaaaagcacgaagaagttggtagtgttcacagggagag
aaggaagaaccggattgagcaggaattatcaggtactggagggacttgag
ggtctcaacctgaactacagcaggagtttgatgtggaagaagctcgagag
gaaggttggcttggccatttcacatcagctagactggacccagaatgatg
ggaggtgggggaaagggtccagttagaaaggaattataagaatctagcag
acactggaaaatagaggccggggtagacacctgaccccacggaggaagaa
ctattttgctctaaatgactctttcacttgaggaggaaatcagtgaggtt
tgttagaaaatcctgagaaactgagacaggaacagtatgtctgaaaaata
aaaaatgctgcctctatattcaaaggaaattccagcaatatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73328042_73329166
seq2: B6Ng01-033I22.b_45_1160 (reverse)

seq1  ACTGACACACAATCCTGAAGATAGCAAACAGCCAGCAAGTGTTTTGCTCT  50
      |||||||||| || ||||   |||| ||||| |||||||||||||||| |
seq2  ACTGACACAC-ATTCTGAGAGTAGC-AACAG-CAGCAAGTGTTTTGCTTT  47

seq1  T-CCCATGCTGGGAGTTGAACACAGGGC-TCAGTCATGGTAGACAAGTGC  98
      | |||||||||||||||| |||||| || |||||||| ||||| ||||||
seq2  TCCCCATGCTGGGAGTTG-ACACAGAGCTTCAGTCAT-GTAGA-AAGTGC  94

seq1  TTTACCACTGAATTACATCTCCATCATCTGTTTAATGTCTCTGAGACCCA  148
      |||||||||||||||||||||||||||||||||| | ||| |||||||||
seq2  TTTACCACTGAATTACATCTCCATCATCTGTTTATTTTCT-TGAGACCCA  143

seq1  ATGGTTTTATTAGAACTTAATCTGCTCACATTTGTTTCCATTTTTAGTAT  198
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  ATGGTTTTATTAGAACTTAATCTGCTCACA-TTGTTTCCA-TTTTAGTAT  191

seq1  ACATATTATTATATTTTTTTGTTTCCCCTTTTTCTTAATTTTTTGCTGAC  248
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  ACATATTATTATA-TTTTTTGTTTCCCCTTTTTCTTAA-TTTTTGCTGAC  239

seq1  TGAACATGCTTTTTATTATTATAATATCCTCTAATCTTGACCGTGAATAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGCTTTTTATTATTATAATATCCTCTAATCTTGACCGTGAATAC  289

seq1  GTGCATTCAATTTTAATGGTTTAGAAATCCTACCTATACATTTCTCTAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTCAATTTTAATGGTTTAGAAATCCTACCTATACATTTCTCTAGA  339

seq1  TATTAAATGCAAGTGGCCTTTCTGAGTCAGTGATAGAGCACTGTCAGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATGCAAGTGGCCTTTCTGAGTCAGTGATAGAGCACTGTCAGCAG  389

seq1  GACCCTGGTAGCGGTAAAGTCGCCGTTTACAGGAAATATAGCTTCATGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGTAGCGGTAAAGTCGCCGTTTACAGGAAATATAGCTTCATGTT  439

seq1  AGTAACAATAATGGCAGAGCTAAGGGTGACATTACAGAGCACTTGAAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAATAATGGCAGAGCTAAGGGTGACATTACAGAGCACTTGAAACT  489

seq1  GTTCTCTTTGGAGGTATATGAGGGATAGGATAGAGTCTTGCTATGAAGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTGGAGGTATATGAGGGATAGGATAGAGTCTTGCTATGAAGCC  539

seq1  CAGACTGGGCTCAAATTTGCAATCCTCCGGTCTCAGCTTTCTGAAGACTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGGCTCAAATTTGCAATCCTCCGGTCTCAGCTTTCTGAAGACTG  589

seq1  GAGTGCCACTACACCAGGCTCTAGAAATGCTATCAGAGGGCAGAGGGCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCACTACACCAGGCTCTAGAAATGCTATCAGAGGGCAGAGGGCAG  639

seq1  ACTGCAAGCTCCCCACTGACTTCCTCCCTTCCTGTATGGAGGGTAAACTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGCTCCCCACTGACTTCCTCCCTTCCTGTATGGAGGGTAAACTA  689

seq1  TAGTTCTAACCAATAGTGTGGAGTAGAGGCATCCAGGAAACCAAAGCTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAACCAATAGTGTGGAGTAGAGGCATCCAGGAAACCAAAGCTGG  739

seq1  GACACAGCCAAGACCATCCTGGGGGGGGGGGGGGGGAATGTCAAACTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGCCAAGACCATCCTGGGGGGGGGGGGGGGGAATGTCAAACTTTA  789

seq1  GGCTCTGAGGCCCACAGACACTAGGACAACCTGCTACAGGATCTACAGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAGGCCCACAGACACTAGGACAACCTGCTACAGGATCTACAGGA  839

seq1  GAGAAGTTGCCCAAGGTGTTTCTGACTACCTCACGCCTCATTACTAGAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTGCCCAAGGTGTTTCTGACTACCTCACGCCTCATTACTAGAGT  889

seq1  GACCAGCTAAGGTATCTGCTCTAGAATGAGGCAGGATCACAGGAATGCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCTAAGGTATCTGCTCTAGAATGAGGCAGGATCACAGGAATGCTA  939

seq1  ACACATCCTCTAAAGAGCTAAGGAATTCAACTGAGAAAAGCAGCCAGAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCTCTAAAGAGCTAAGGAATTCAACTGAGAAAAGCAGCCAGAAG  989

seq1  TCTGACTTTCCTAATGGACAGCTAAGAAGTCAGAGGACTTGGACCCTGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTTCCTAATGGACAGCTAAGAAGTCAGAGGACTTGGACCCTGTA  1039

seq1  AACTTCTCATTTCTGAAAATGAAGTAGTTGTCAATCTTTTAAACATTGGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTCATTTCTGAAAATGAAGTAGTTGTCAATCTTTTAAACATTGGT  1089

seq1  ATGACTAGGGGTGGGAGGAAGGAATTC  1125
      |||||||||||||||||||||||||||
seq2  ATGACTAGGGGTGGGAGGAAGGAATTC  1116

seq1: chr2_73196208_73196948
seq2: B6Ng01-033I22.g_66_808

seq1  GAATTCTCAGCTCCTCCTGCACCATGCCTGCTTGGATGCTGCCATGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTCCTCCTGCACCATGCCTGCTTGGATGCTGCCATGTTCC  50

seq1  CACTTTGACGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGACGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAAT  100

seq1  TAAATGTTGTCCTTTGTAAGACTTGCCTTGGTCATGGTGTCTGTCCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGTCCTTTGTAAGACTTGCCTTGGTCATGGTGTCTGTCCACAG  150

seq1  CAGTAAAACCCAACTAAGACAATCAATTTTAAAAGGAACATCATCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAACCCAACTAAGACAATCAATTTTAAAAGGAACATCATCAAGAG  200

seq1  GCTTGGAAGAATAAAATTCTGATGACATCACCACAGATTGTCAGTGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAGAATAAAATTCTGATGACATCACCACAGATTGTCAGTGAGCC  250

seq1  TGGGTTTAAGGGCTATGCAGTAAAAGCAGGAAGGAGAGAGAGGACACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAAGGGCTATGCAGTAAAAGCAGGAAGGAGAGAGAGGACACAAG  300

seq1  GGCCAGTCTGGGGAAAAGCACGAAGAAGTTGGTAGTGTTCACAGGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCTGGGGAAAAGCACGAAGAAGTTGGTAGTGTTCACAGGGAGAG  350

seq1  AAGGAAGAACCGGATTGAGCAGGAATTATCAGGTACTGGAGGGACTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAACCGGATTGAGCAGGAATTATCAGGTACTGGAGGGACTTGAG  400

seq1  GGTCTCAACCTGAACTACAGCAGGAGTTTGATGTGGAAGAAGCTCGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAACCTGAACTACAGCAGGAGTTTGATGTGGAAGAAGCTCGAGAG  450

seq1  GAAGGTTGGCTTGGCCATTTCACATCAGCTAGACTGGACCCAGAATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGGCTTGGCCATTTCACATCAGCTAGACTGGACCCAGAATGATG  500

seq1  GGAGGTGGGGGAAAGGGTCCAGTTAGAAAGGAATTATAAGAATCTAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGGGGGAAAGGGTCCAGTTAGAAAGGAATTATAAGAATCTAGCAG  550

seq1  ACACTGG-AAATAGAGGCCGGGGTAGACACCGGACCCCACGGAGGAAGAA  599
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  ACACTGGAAAATAGAGGCCGGGGTAGACACCTGACCCCACGGAGGAAGAA  600

seq1  CTA-CTTGCTCTAAATGACTCTTTCACTTGAGGAGGAAATCAGTGAGGTT  648
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGCTCTAAATGACTCTTTCACTTGAGGAGGAAATCAGTGAGGTT  650

seq1  TGTTAG-AAATCCTGAGAAACTGAGACAGGAACAGTATGTCTGAAAATTA  697
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTTAGAAAATCCTGAGAAACTGAGACAGGAACAGTATGTCTGAAAAATA  700

seq1  AAAAATGCTGCCTCTATATTCAAAAGGAGATTCCAGCAATATAC  741
      ||||||||||||||||||||| |||||| |||||||||||||||
seq2  AAAAATGCTGCCTCTATATTC-AAAGGAAATTCCAGCAATATAC  743