BAC Information

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BAC

Clone NameB6Ng01-033N11
Chromosome2 (Build37)
Map Location 86,869,125 - 86,956,024
singlet/doubletdoublet
Overlap geneOlfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259
Upstream geneOlfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104
Downstream geneLOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033N11.bB6Ng01-033N11.g
ACCDH862778DH862779
length662905
definitionDH862778|Mus musculus domesticus DNA, BAC clone: B6Ng01-033N11, 5' end.DH862779|Mus musculus domesticus DNA, BAC clone: B6Ng01-033N11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,869,125 - 86,869,786)(86,955,121 - 86,956,024)
sequence
gaattcatttcatagatcaggctcaccttcaactcaccgaaatctgcctg
cctctacttctctagtggtgagattaaagttatgttgaaattttctacag
gcattgagcaaaggtactttggcattgtacaggaaatagacagggtaaca
gaaccaaagggccagtgaaaatgtgaatgtggcccagaaacttagaatac
ccaagatataatatacaatttgcaaaacacatgaaactcaagaagaatga
agaccaaagtgtggacactttgtcccttcttagaattgggaacaaaacac
ccatggaaggagttacagagacaaagtttggagctgagacgaaacgatga
accatctagagactgcagtacccggggatctatcccataatcagcctcca
aacgctgacaccattgcatacactagcaagattttgctgaaaggaccttg
atatagctgtctcttgtgaggctatgccgggtcctagcaaacacagaagt
ggatgctcacagttagctaatggatggatcacagggctcccaatggagga
gctagagaaagtacccaaggagctaaagggatcttcacccttataggtgg
aataacaatatgaactaaccagtaccccctggagctcgtgtctctagctg
catatgtatcag
gaattcttgagaaatgttgaaattgtatgcctcccattagctgggatcct
cttgacttttgcaattactcttgtttgtttgtttgtttgtttgtttttca
aggcagggtttctctgtgtagtcctggctgtcctggaactcactctgtag
accagtctggcctcgaacttagaaatttgcctgcctctgcctcccaagtt
ctggaattaaagacttgtgccaccatgcccggccttgtaattactattaa
tgtgcctgtccttgtgctaagccacagtaagcatgtggtgactggttaga
caataaagaacttacttgggaagtaggagatatggtgatgttaaaaaaaa
tctagaaaaggtaggaaattttacataataatatctgagggtaatagaca
ttctaaaaactaaaatatttgtatttttacacattctttcaagaagtgaa
gactgaaatatgctattgaaaactgtgttacctatttttcattttgatga
aattctccaatatgtgtgattctaatttttaaaatgaattggaatctatg
agctattccaaattcttcttgcaatttaaaccattaccatgtttttaaag
tgttatttattaattatacaagtgaaggagaaccacaatggaaaattaca
tgttatatggtaatgagggaaataaaatctataatatatttatgatcatc
cacattgttagtttatgaaaattaaacaacaatgtaattgcaaactacat
aatatttatgattttatatagtataatgtgtcccaaaagagtaaccattg
aagattttacatggttgtcaaaataagaatgaatatactataggaaaata
tatatagctacatcaattttggagaaatttttattaattttcaattgttt
tatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86869125_86869786
seq2: B6Ng01-033N11.b_46_707

seq1  GAATTCATTTCATAGATCAGGCTCACCTTCAACTCACCGAAATCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCATAGATCAGGCTCACCTTCAACTCACCGAAATCTGCCTG  50

seq1  CCTCTACTTCTCTAGTGGTGAGATTAAAGTTATGTTGAAATTTTCTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTTCTCTAGTGGTGAGATTAAAGTTATGTTGAAATTTTCTACAG  100

seq1  GCATTGAGCAAAGGTACTTTGGCATTGTACAGGAAATAGACAGGGTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAGCAAAGGTACTTTGGCATTGTACAGGAAATAGACAGGGTAACA  150

seq1  GAACCAAAGGGCCAGTGAAAATGTGAATGTGGCCCAGAAACTTAGAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAAGGGCCAGTGAAAATGTGAATGTGGCCCAGAAACTTAGAATAC  200

seq1  CCAAGATATAATATACAATTTGCAAAACACATGAAACTCAAGAAGAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATATAATATACAATTTGCAAAACACATGAAACTCAAGAAGAATGA  250

seq1  AGACCAAAGTGTGGACACTTTGTCCCTTCTTAGAATTGGGAACAAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAAGTGTGGACACTTTGTCCCTTCTTAGAATTGGGAACAAAACAC  300

seq1  CCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAACGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAACGATGA  350

seq1  ACCATCTAGAGACTGCAGTACCCGGGGATCTATCCCATAATCAGCCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTAGAGACTGCAGTACCCGGGGATCTATCCCATAATCAGCCTCCA  400

seq1  AACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCTTG  450

seq1  ATATAGCTGTCTCTTGTGAGGCTATGCCGGGTCCTAGCAAACACAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCTGTCTCTTGTGAGGCTATGCCGGGTCCTAGCAAACACAGAAGT  500

seq1  GGATGCTCACAGTTAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCACAGTTAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGA  550

seq1  GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCACCCTTATAGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCACCCTTATAGGTGG  600

seq1  AATAACAATATGAACTAACCAGTACCCCCTGGAGCTCGTGTCTCTAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAATATGAACTAACCAGTACCCCCTGGAGCTCGTGTCTCTAGCTG  650

seq1  CATATGTATCAG  662
      ||||||||||||
seq2  CATATGTATCAG  662

seq1: chr2_86955121_86956024
seq2: B6Ng01-033N11.g_72_976 (reverse)

seq1  TAATAAAACAATTG-AAATTAATTAAAATTTCTCCAAAATTGATGTAGCT  49
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TAATAAAACAATTGAAAATTAATAAAAATTTCTCCAAAATTGATGTAGCT  50

seq1  ATATATATTTTTCCTATAGTATATTCATTCTTATTTTGAC-ACCATGTAA  98
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ATATATA-TTTTCCTATAGTATATTCATTCTTATTTTGACAACCATGTAA  99

seq1  AATCTTCAATGGTTACTCTTTTGGGACACATTATACTATATAAAATCATA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATCTTCAATGGTTACTCTTTTGGGACACATTATACTATATAAAATCAT-  148

seq1  AAATATTATGTAGTTTGCAATTACATTGTTGTTTAATTTTCATAAACTAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATGTAGTTTGCAATTACATTGTTGTTTAATTTTCATAAACTAA  198

seq1  CAATGTGGATGATCATAAATATATTATAGATTTTATTTCCCTCATTACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGGATGATCATAAATATATTATAGATTTTATTTCCCTCATTACCA  248

seq1  TATAACATGTAATTTTCCATTGTGGTTCTCCTTCACTTGTATAATTAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATGTAATTTTCCATTGTGGTTCTCCTTCACTTGTATAATTAATA  298

seq1  AATAACACTTT-AAAACATGGTAATGGTTTAAATTGCAAGAAGAATTTGG  347
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATAACACTTTAAAAACATGGTAATGGTTTAAATTGCAAGAAGAATTTGG  348

seq1  AATAGCTCATAGATTCCAATTCATTTTAAAAATTAGAATCACACATATTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCATAGATTCCAATTCATTTTAAAAATTAGAATCACACATATTG  398

seq1  GAGAATTTCATCAAAATGAAAAATAGGTAACACAGTTTTCAATAGCATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTCATCAAAATGAAAAATAGGTAACACAGTTTTCAATAGCATAT  448

seq1  TTCAGTCTTCACTTCTTGAAAGAATGTGTAAAAATACAAATATTTTAGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTTCACTTCTTGAAAGAATGTGTAAAAATACAAATATTTTAGTT  498

seq1  TTTAGAATGTCTATTACCCTCAGATATTATTATGTAAAATTTCCTACCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATGTCTATTACCCTCAGATATTATTATGTAAAATTTCCTACCTT  548

seq1  TTCTAGATTTTTTTTAACATCACCATATCTCCTACTTCCCAAGTAAGTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATTTTTTTTAACATCACCATATCTCCTACTTCCCAAGTAAGTTC  598

seq1  TTTATTGTCTAACCAGTCACCACATGCTTACTGTGGCTTAGCACAAGGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTCTAACCAGTCACCACATGCTTACTGTGGCTTAGCACAAGGAC  648

seq1  AGGCACATTAATAGTAATTACAAGGCCGGGCATGGTGGCACAAGTCTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATTAATAGTAATTACAAGGCCGGGCATGGTGGCACAAGTCTTTA  698

seq1  ATTCCAGAACTTGGGAGGCAGAGGCAGGCAAATTTCTAAGTTCGAGGCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAACTTGGGAGGCAGAGGCAGGCAAATTTCTAAGTTCGAGGCCA  748

seq1  GACTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAAC  798

seq1  CCTGCCTTGAAAAACAAACAAACAAACAAACAAACAAGAGTAATTGCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTTGAAAAACAAACAAACAAACAAACAAACAAGAGTAATTGCAAA  848

seq1  AGTCAAGAGGATCCCAGCTAATGGGAGGCATACAATTTCAACATTTCTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGAGGATCCCAGCTAATGGGAGGCATACAATTTCAACATTTCTCA  898

seq1  AGAATTC  904
      |||||||
seq2  AGAATTC  905