BAC Information

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BAC

Clone NameB6Ng01-033P09
Chromosome2 (Build37)
Map Location 128,331,263 - 128,478,703
singlet/doubletdoublet
Overlap geneLOC383791, LOC100043730, Gm355, Anapc1
Upstream geneKcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729
Downstream geneMertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik, Sirpa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033P09.bB6Ng01-033P09.g
ACCDH862860DH862861
length1,068772
definitionDH862860|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P09, 5' end.DH862861|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,331,263 - 128,331,901)(128,477,934 - 128,478,703)
sequence
gaattccaggcaactggtagagaggatagttggatacttggtaaatgtcc
cacaattctctttgctccctccttctaaaaggtaaggtcatcagtcaata
aactatagattactttgatgtttaaaaatgcttctctcaagggctgagga
tggcttagcagttaagagcactggttgctcttacagagatttggctcaca
gctagctataacaccagttctaggggaatctgatgccttcttctggactt
tgctagcactgcagatgtgcacatgacatacaggcataaataataaaaac
aattttaaaatctttaaggtacatagaagtacaagtctacaaaaagagcc
aaggtcaccttggaggaggacgaagcttgagaattgctactgcaaagaga
ctgcagtacttaagacagtgctgcttgttgtgaatgtgtagacaaataga
aaaacagaacagaaaactgtagctagaaacagagctttggatgggtgtcc
atatgcaacaatagcaaaagataaagataaaaagatgttttcaatgaaag
ttttggggtcaatcaggtatttcatatagagaaaaattaactgtgaagca
cacctgatactatgtataaaagccaatgccagtattattgtttccctaaa
ggtggagagcaaaacaaatgaagtgtccatcatgatatgcaggagagtaa
ttgtgctggctagtgttacatcaacttgacccaaactagagtcattggag
aggagagagacttaggtgagaaaatgcctccctaagatccacctgtaggc
aagcctatttggcattttcttaattagtgattgatgagtgaaggcccagc
tcattgtgggtggtgccttccctgggctggtggtcatgggttagataaga
aagcaggctgagcaagtcataaagagcaagccagtaagcagcagccctcc
acgacctctgcatcggtgcctgcctccaggttcaagctctgcttgattga
gcttctgtcctgagttccttcagtgctgtggaagtgtaagccaataaagc
cctacttcctcagtactt
gaattccagatatcttctgcatgttgcttttcttaccaggatgtctatta
aaataaagtttccatttgttgcctttcagctccccaaaagccacaagcag
agcaagaagaaaacaggtagtttgtttcggactgtgctttcatatttaaa
gttggaggcgttgttgagtgtgtgtgtttaatgtacttttgttctccata
ggtttactttccggcattctgcttccgtttctgttctggccgagagatta
gttgtctggatggccagtgtaggtaagagctgtgctgttactgagggcca
ggtcctgcttccagaccactctcactggaactgggaggcctgtggagagt
ctggttttctgtaaaggctgaagattgagatactggtcattaagtggagc
ctttacaacttctatagtagagtagctgggacaccagccttttatatcgt
agggcactggaaatctttatttcattccctgtggatcagttgaggctgca
gatctgtaaactggtctcagaatgcaaactttagttactatacctctaaa
tgtgaagccattctgagatttcagtgtagaaatgggcactctcttgtcat
ctaagatcagctgtgtaggcccttcatagtgctctcaaacagaaaaggct
cgaggttttaggcagtgtgatgaatgaatactcagctaacaagaagggag
gaaaattaattcttttttatttttaaatatattatttatttattatttat
atgagtacacccatagctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128331263_128331901
seq2: B6Ng01-033P09.b_44_682

seq1  GAATTCCAGGCAACTGGTAGAGAGGATAGTTGGATACTTGGTAAATGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCAACTGGTAGAGAGGATAGTTGGATACTTGGTAAATGTCC  50

seq1  CACAATTCTCTTTGCTCCCTCCTTCTAAAAGGTAAGGTCATCAGTCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTCTCTTTGCTCCCTCCTTCTAAAAGGTAAGGTCATCAGTCAATA  100

seq1  AACTATAGATTACTTTGATGTTTAAAAATGCTTCTCTCAAGGGCTGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGATTACTTTGATGTTTAAAAATGCTTCTCTCAAGGGCTGAGGA  150

seq1  TGGCTTAGCAGTTAAGAGCACTGGTTGCTCTTACAGAGATTTGGCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGCAGTTAAGAGCACTGGTTGCTCTTACAGAGATTTGGCTCACA  200

seq1  GCTAGCTATAACACCAGTTCTAGGGGAATCTGATGCCTTCTTCTGGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTATAACACCAGTTCTAGGGGAATCTGATGCCTTCTTCTGGACTT  250

seq1  TGCTAGCACTGCAGATGTGCACATGACATACAGGCATAAATAATAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCACTGCAGATGTGCACATGACATACAGGCATAAATAATAAAAAC  300

seq1  AATTTTAAAATCTTTAAGGTACATAGAAGTACAAGTCTACAAAAAGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAATCTTTAAGGTACATAGAAGTACAAGTCTACAAAAAGAGCC  350

seq1  AAGGTCACCTTGGAGGAGGACGAAGCTTGAGAATTGCTACTGCAAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACCTTGGAGGAGGACGAAGCTTGAGAATTGCTACTGCAAAGAGA  400

seq1  CTGCAGTACTTAAGACAGTGCTGCTTGTTGTGAATGTGTAGACAAATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTACTTAAGACAGTGCTGCTTGTTGTGAATGTGTAGACAAATAGA  450

seq1  AAAACAGAACAGAAAACTGTAGCTAGAAACAGAGCTTTGGATGGGTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAACAGAAAACTGTAGCTAGAAACAGAGCTTTGGATGGGTGTCC  500

seq1  ATATGCAACAATAGCAAAAGATAAAGATAAAAAGATGTTTTCAATGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAACAATAGCAAAAGATAAAGATAAAAAGATGTTTTCAATGAAAG  550

seq1  TTTTGGGGTCAATCAGGTATTTCATATAGAGAAAAATTAACTGTGAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGTCAATCAGGTATTTCATATAGAGAAAAATTAACTGTGAAGCA  600

seq1  CACCTGATACTATGTATAAAAGCCAATGCCAGTATTATT  639
      |||||||||||||||||||||||||||||||||||||||
seq2  CACCTGATACTATGTATAAAAGCCAATGCCAGTATTATT  639

seq1: chr2_128477934_128478703
seq2: B6Ng01-033P09.g_69_840 (reverse)

seq1  AGACAGCTAT-GGTGTACTCATATAAATAATAAATAAATAATATATTTAA  49
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTATGGGTGTACTCATATAAATAATAAATAAATAATATATTTAA  50

seq1  AAAT-AAAAAGAATTAATTTTCCTCCCTTCTTGTTAGCTGAGTATTCATT  98
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAAAGAATTAATTTTCCTCCCTTCTTGTTAGCTGAGTATTCATT  100

seq1  CATCACACTGCCTAAAACCTCGAGCCTTTTCTGTTTGAGAGCACTATGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACACTGCCTAAAACCTCGAGCCTTTTCTGTTTGAGAGCACTATGAA  150

seq1  GGGCCTACACAGCTGATCTTAGATGACAAGAGAGTGCCCATTTCTACACT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTACACAGCTGATCTTAGATGACAAGAGAGTGCCCATTTCTACACT  200

seq1  GAAATCTCAGAATGGCTTCACATTTAGAGGTATAGTAACTAAAGTTTGCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTCAGAATGGCTTCACATTTAGAGGTATAGTAACTAAAGTTTGCA  250

seq1  TTCTGAGACCAGTTTACAGATCTGCAGCCTCAACTGATCCACAGGGAATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGACCAGTTTACAGATCTGCAGCCTCAACTGATCCACAGGGAATG  300

seq1  AAATAAAGATTTCCAGTGCCCTACGATATAAAAGGCTGGTGTCCCAGCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGATTTCCAGTGCCCTACGATATAAAAGGCTGGTGTCCCAGCTA  350

seq1  CTCTACTATAGAAGTTGTAAAGGCTCCACTTAATGACCAGTATCTCAATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTATAGAAGTTGTAAAGGCTCCACTTAATGACCAGTATCTCAATC  400

seq1  TTCAGCCTTTACAGAAAACCAGACTCTCCACAGGCCTCCCAGTTCCAGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTTTACAGAAAACCAGACTCTCCACAGGCCTCCCAGTTCCAGTG  450

seq1  AGAGTGGTCTGGAAGCAGGACCTGGCCCTCAGTAACAGCACAGCTCTTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGTCTGGAAGCAGGACCTGGCCCTCAGTAACAGCACAGCTCTTAC  500

seq1  CTACACTGGCCATCCAGACAACTAATCTCTCGGCCAGAACAGAAACGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTGGCCATCCAGACAACTAATCTCTCGGCCAGAACAGAAACGGAA  550

seq1  GCAGAATGCCGGAAAGTAAACCTATGGAGAACAAAAGTACATTAAACACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGCCGGAAAGTAAACCTATGGAGAACAAAAGTACATTAAACACA  600

seq1  CACACTCAACAACGCCTCCAACTTTAAATATGAAAGCACAGTCCGAAACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCAACAACGCCTCCAACTTTAAATATGAAAGCACAGTCCGAAACA  650

seq1  AACTACCTGTTTTCTTCTTGCTCTGCTTGTGGCTTTTGGGGAGCTGAAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCTGTTTTCTTCTTGCTCTGCTTGTGGCTTTTGGGGAGCTGAAAG  700

seq1  GCAACAAATGGAAACTTTATTTTAATAGACATCCTGGTAAGAAAAGCAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAATGGAAACTTTATTTTAATAGACATCCTGGTAAGAAAAGCAAC  750

seq1  ATGCAGAAGATATCTGGAATTC  770
      ||||||||||||||||||||||
seq2  ATGCAGAAGATATCTGGAATTC  772