BAC Information

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BAC

Clone NameB6Ng01-034D03
Chromosome11 (Build37)2 (Build37)
Map Location 6,465,808 - 6,466,75327,466,915 - 27,467,129
singlet/doubletsingletsinglet
Overlap geneCcm2
Upstream geneLOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2, Polm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, LOC665327
Downstream geneAB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034D03.bB6Ng01-034D03.g
ACCDH863020DH863021
length912562
definitionDH863020|Mus musculus domesticus DNA, BAC clone: B6Ng01-034D03, 5' end.DH863021|Mus musculus domesticus DNA, BAC clone: B6Ng01-034D03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(6,465,808 - 6,466,753)(27,466,915 - 27,467,129)
sequence
gaattctccacttagtcttcagcaatcacagttgattgtgggttacagat
ctgggaagtgaggccgggtaatggggattgtttcagtttattatctgagc
ttggttaggaagactcatgacttaggcctgagatttgggaattgtgcttt
ttctggctagtctgtgagtagaccaatggtgacattcaattctggtcagc
tctccttgttccttgctacttaggaaccctaccacaaaacccaggtggtt
tgaccttatggtaggtcggcaaaagctgctgagctgctggctgggctggt
tttgccatgggtttagtttctcttactctgctcttctcctagtttttctg
cttcctatagccctcctgagcatagggactatttcatccatagccttcct
cgattactgatctggtaggcacacaaaataaaggttctgcactgggattt
attacttactgtagtctgtacagactacatacatgctacatatacaggct
acatacatggtacatattggatgctggaagccacacaagctgtaaaggcc
agactaaggatccagctctgtggcaggtcacttgctgggcatgtgtggga
gctgagagaatgggactctcagacagtgagagacatatgttgggcatcgg
ggctgacctatttcttttgtaaagtgctagcccaggtacctcatacagaa
gggtctgtttatcttttagctgggatacaagaaccccaggcccttccacc
cgactctattttatgagtgttttcactgttaagaaaaagtgaaaagcgtg
ggtctgtgggcctgttgattggtaagcttggttagagttgatctggcaac
cctggttccagtggttctgtgcatcccctgtagtaaaatagtggactgac
aacactggaagg
ttggcttgttcggtgggtggcttggcttggtggagaccgtggctgagaac
acagggaggtctcctgcaggagattagacacatggctatttagaggaagg
cctgctccattgttccagcaggcggatcacaatgagaagagacagttcat
gattttaaagcgtttattgtcatggtggagagctgtgatgaatgaaacct
taccccactttctcagggtgggcctgaggctaaataccttttgtagggag
gagtgtctgggaaggagaggcagagaaaggcagagagagggagagagtag
agaaagagaggccagtcatggccacatgggtgggggtggggggaattttt
catgttctctttgggctgccccaatagatctaaactcagttttatcctgt
gttggttactctcttgttgcttcaacaaaatacctggccaaagcaagtta
aggaaggaaggttttgccctggctcacagttcaagggggtccagttgcag
aaaccccatcagggttctgtcaaagcccatttaagaaatgcttttgagcc
gggtggtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6465808_6466753
seq2: B6Ng01-034D03.b_41_952

seq1  GAATTCTCCACTTAGTCTTCAGCAATCACAGTTGATTGTGGGTTACAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACTTAGTCTTCAGCAATCACAGTTGATTGTGGGTTACAGAT  50

seq1  CTGGGAAGTGAGGCCGGGTAATGGGGATTGTTTCAGTTTATTATCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGTGAGGCCGGGTAATGGGGATTGTTTCAGTTTATTATCTGAGC  100

seq1  TTGGTTAGGAAGACTCATGACTTAGGCCTGAGATTTGGGAATTGTGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTAGGAAGACTCATGACTTAGGCCTGAGATTTGGGAATTGTGCTTT  150

seq1  TTCTGGCTAGTCTGTGAGTAGACCAATGGTGACATTCAATTCTGGTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCTAGTCTGTGAGTAGACCAATGGTGACATTCAATTCTGGTCAGC  200

seq1  TCTCCTTGTTCCTTGCTACTTAGGAACCCTACCACAAAACCCAGGTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGTTCCTTGCTACTTAGGAACCCTACCACAAAACCCAGGTGGTT  250

seq1  TGACCTTATGGTAGGTCGGCAAAAGCTGCTGAGCTGCTGGCTGGGCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTATGGTAGGTCGGCAAAAGCTGCTGAGCTGCTGGCTGGGCTGGT  300

seq1  TTTGCCATGGGTTTAGTTTCTCTTACTCTGCTCTTCTCCTAGTTTTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCATGGGTTTAGTTTCTCTTACTCTGCTCTTCTCCTAGTTTTTCTG  350

seq1  CTTCCTATAGCCCTCCTGAGCATAGGGACTATTTCATCCATAGCCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATAGCCCTCCTGAGCATAGGGACTATTTCATCCATAGCCTTCCT  400

seq1  CGATTACTGATCTGGTAGGCACACAAAATAAAGGTTCTGCACTGGGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTACTGATCTGGTAGGCACACAAAATAAAGGTTCTGCACTGGGATTT  450

seq1  ATTACTTACTGTAGTCTGTACAGACTACATACATGCTACATATACAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTACTGTAGTCTGTACAGACTACATACATGCTACATATACAGGCT  500

seq1  ACATACATGGTACATATTGGATGCTGGAAGCCACACAAGCTGTAAAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGGTACATATTGGATGCTGGAAGCCACACAAGCTGTAAAGGCC  550

seq1  AGACTAAGGATCCAGCTCTGTGGCAGGTCACTTGCTGGGCATGTGT-GGA  599
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGACTAAGGATCCAGCTCTGTGGCAGGTCACTTGCTGGGCATGTGTGGGA  600

seq1  GCTGAGAGAAT-GGACTCTCAGACAGTGAGAGACATATGTTGGGGCATCG  648
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  GCTGAGAGAATGGGACTCTCAGACAGTGAGAGACATATGTT-GGGCATCG  649

seq1  GGGCTGACCTAGTTTCTTTGTAGAGTGCTAGCCCATGTCACCTCATTACA  698
      ||||||||||| ||  |||||| |||||||||||| || |||||| ||||
seq2  GGGCTGACCTATTTCTTTTGTAAAGTGCTAGCCCAGGT-ACCTCA-TACA  697

seq1  G-AGGGTCTGTTTATCTTTTAGGCTGGGATTACAAGACACCCCAGGGCCC  747
      | ||||||||||||||||||| ||||||| ||||||| |||||| |||||
seq2  GAAGGGTCTGTTTATCTTTTA-GCTGGGA-TACAAGA-ACCCCA-GGCCC  743

seq1  TTCCCAACACAGACTCTATTTTATGAGCTGTTTATCACTGTTAAAGAAAG  797
      ||||  || | |||||||||||||||| ||||| |||||||| |||||| 
seq2  TTCC--AC-CCGACTCTATTTTATGAG-TGTTT-TCACTGTT-AAGAAAA  787

seq1  AGTGTAAAAGGCGTGTGGTCTGTGGGCCTGTTGATTTGGTGAGAGCTTGG  847
      ||||  ||| ||||| |||||||||||||||||| |||||   |||||||
seq2  AGTG--AAAAGCGTG-GGTCTGTGGGCCTGTTGA-TTGGT--AAGCTTGG  831

seq1  TTAGAGGTTGATCTTGGCAAACCTCTGGTTTCACAGTTGGTTTCCTGTTG  897
      ||||| ||||||| ||||||  | |||||| ||    |||||  ||| ||
seq2  TTAGA-GTTGATC-TGGCAA--CCCTGGTTCCA---GTGGTT--CTG-TG  871

seq1  CATCCACGTGTAAGTTAAGAATGAGTTGGACTGACAGACAACTGGAAGG  946
      ||||| | ||| |||  | ||| || |||||||||| || |||||||||
seq2  CATCC-CCTGT-AGT--AAAAT-AG-TGGACTGACA-AC-ACTGGAAGG  912

seq1: chr2_27466915_27467129
seq2: B6Ng01-034D03.g_418_634 (reverse)

seq1  CACCACCACCCGGCTC-AAAGCATTTCTT-AATGGGCTTTGACAGAACCC  48
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  CACCACCACCCGGCTCAAAAGCATTTCTTAAATGGGCTTTGACAGAACCC  50

seq1  TGATGGGGTTTCTGCAACTGGACCCCCTTGAACTGTGAGCCAGGGCAAAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGTTTCTGCAACTGGACCCCCTTGAACTGTGAGCCAGGGCAAAA  100

seq1  CCTTCCTTCCTTAACTTGCTTTGGCCAGGTATTTTGTTGAAGCAACAAGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTAACTTGCTTTGGCCAGGTATTTTGTTGAAGCAACAAGA  150

seq1  GAGTAACCAACACAGGATAAAACTGAGTTTAGATCTATTGGGGCAGCCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACCAACACAGGATAAAACTGAGTTTAGATCTATTGGGGCAGCCCA  200

seq1  AAGAGAACATGAAAAAT  215
      |||||||||||||||||
seq2  AAGAGAACATGAAAAAT  217