BAC Information

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BAC

Clone NameB6Ng01-034E22
Chromosome2 (Build37)
Map Location 169,962,767 - 170,119,970
singlet/doubletdoublet
Overlap geneSilg111
Upstream geneEG668954, Tshz2, LOC100043737, LOC100043910, Zfp217
Downstream geneLOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5, LOC668955, LOC100043743
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034E22.bB6Ng01-034E22.g
ACCDH863100DH863101
length2381,015
definitionDH863100|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E22, 5' end.DH863101|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(169,962,767 - 169,963,004)(170,118,948 - 170,119,970)
sequence
cccaccagcctatgctacccagcaagatatagacataaaataaaaataaa
aataaaaacagctcctggggctgtcactatttgggaaggtgtttgtctag
catgcacaggcccaaggtctgatctggaatgtgtggtggctcatgcctat
atcctagcatttgacaggtggaatcagagagaccagggacttaaaggcaa
gctctactacccccaaataactgggggggtggggggga
gaattcatgaagccccggcccatcttgagacgctatcagcgattaatagt
tgtgggggaagcagagatctttccttcagcaggcaagtctagagtattcg
tttcttttctaacgctgtgggggatgcgaagaaatcatgggacgcagagc
gaggcgccatgggctcctgcgactccttgaagagacctgatcagctgtgc
gtggcattagagttaagatggttcctggaatactgatgagatagcaacaa
acgaactgaggccagggtgaccgctgcttcttcttcaccgaagtcttaac
aggtgactcataccatctcacttctgagatacctcatcaggtcgggcttt
cattggagcacggtgacgacggtgtggtgagatgtgattggcccaggatt
tgggggcttgggattggctcaagcattttttttttttaagatttatttat
ttattatatgtaagtacactgtagctgtcttcagacactccagaagaggg
agtcagatctcgttacagatggttgtgagccaccatgtggttgctgggat
ttgaactctggaccttcggaagagcagtcgggtgctctaacccactgagc
catctcaccagccctggctcaagcattttatatacgcttatgcactgggt
aataagctcagatctgcaccctgatgctggtctcgggagtctgctatccc
gggacttgtcatgtgactccatcacctctcacaccaccacccccccaacc
ccaccctcgatcctgttcccacacatgaccaaggcagcttacagaaggaa
aggcttacctgccggcttacagtacaggggtttaagagacgaagattgcc
aaacaaaggcatggttgagctcaaacttgatccataacaggaaacagaat
tcattggagatgtaggaggcttttacacctcaagccactccccatgaaca
cgctcctcaaaaagaccacacctcctatgctcccaaacgggcccaccaac
tgggagcaaaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_169962767_169963004
seq2: B6Ng01-034E22.b_49_286

seq1  CCCACCAGCCTATGCTACCCAGCAAGATATAGACATAAAATAAAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGCCTATGCTACCCAGCAAGATATAGACATAAAATAAAAATAAA  50

seq1  AATAAAAACAGCTCCTGGGGCTGTCACTATTTGGGAAGGTGTTTGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAACAGCTCCTGGGGCTGTCACTATTTGGGAAGGTGTTTGTCTAG  100

seq1  CATGCACAGGCCCAAGGTCTGATCTGGAATGTGTGGTGGCTCATGCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGGCCCAAGGTCTGATCTGGAATGTGTGGTGGCTCATGCCTAT  150

seq1  ATCCTAGCATTTGACAGGTGGAATCAGAGAGACCAGGGACTTAAAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGCATTTGACAGGTGGAATCAGAGAGACCAGGGACTTAAAGGCAA  200

seq1  GCTCTACTACCCCCAAATAACTGGGGGGGTGGGGGGGA  238
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACTACCCCCAAATAACTGGGGGGGTGGGGGGGA  238

seq1: chr2_170118948_170119970
seq2: B6Ng01-034E22.g_68_1082 (reverse)

seq1  AATATTTGGCTCCCAGTTGGTGGGACCGTTTGGGAAGCATTAGGAGGTGT  50
      || |||| |||||||||||||||| ||||||||| |||| ||||||||||
seq2  AAAATTTTGCTCCCAGTTGGTGGGCCCGTTTGGG-AGCA-TAGGAGGTGT  48

seq1  GGTCTTGTTGGAGGAGGCGTG-TCATTGGGAGTGGGCTTTGAGGTGTAAA  99
      |||||| || ||||| ||||| |||| ||||||||   ||||||||||||
seq2  GGTCTT-TTTGAGGA-GCGTGTTCATGGGGAGTGG--CTTGAGGTGTAAA  94

seq1  AGCCTCCTACCATCTCCAATGAATTCTGTTTCCTGTTTATGGATCAAGTT  149
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  AGCCTCCTA-CATCTCCAATGAATTCTGTTTCCTG-TTATGGATCAAGTT  142

seq1  CTGAGCTCCACCATGCCTTTGTTTGGCCATCCTCGTCTC-TAAACCCCTG  198
       ||||||| |||||||||||||||||| ||| ||||||| ||||||||| 
seq2  -TGAGCTCAACCATGCCTTTGTTTGGCAATCTTCGTCTCTTAAACCCCT-  190

seq1  GTACTGTAAGCCGGCAGGTAAGCCTTTCCTTCTGTAAGCTGCCTTGGTCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTAAGCCGGCAGGTAAGCCTTTCCTTCTGTAAGCTGCCTTGGTCA  240

seq1  TGTGTGGGAACAGGATCGAGGGTGGGGTTGGGGGGGTGGTGGTGTGAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGAACAGGATCGAGGGTGGGGTTGGGGGGGTGGTGGTGTGAGAG  290

seq1  GTGATGGAGTCACATGACAAGTCCCGGGATAGCAGACTCCCGAGACCAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGAGTCACATGACAAGTCCCGGGATAGCAGACTCCCGAGACCAGC  340

seq1  ATCAGGGTGCAGATCTGAGCTTATTACCCAGTGCATAAGCGTATATAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGTGCAGATCTGAGCTTATTACCCAGTGCATAAGCGTATATAAAA  390

seq1  TGCTTGAGCCAGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGCCAGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACT  440

seq1  GCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCA  490

seq1  CAACCATCTGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCTGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACA  540

seq1  GCTACAGTGTACTTACATATAATAAATAAATAAATCTTAAAAAAAAAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTGTACTTACATATAATAAATAAATAAATCTTAAAAAAAAAAAA  590

seq1  TGCTTGAGCCAATCCCAAGCCCCCAAATCCTGGGCCAATCACATCTCACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGCCAATCCCAAGCCCCCAAATCCTGGGCCAATCACATCTCACC  640

seq1  ACACCGTCGTCACCGTGCTCCAATGAAAGCCCGACCTGATGAGGTATCTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGTCGTCACCGTGCTCCAATGAAAGCCCGACCTGATGAGGTATCTC  690

seq1  AGAAGTGAGATGGTATGAGTCACCTGTTAAGACTTCGGTGAAGAAGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGATGGTATGAGTCACCTGTTAAGACTTCGGTGAAGAAGAAGC  740

seq1  AGCGGTCACCCTGGCCTCAGTTCGTTTGTTGCTATCTCATCAGTATTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTCACCCTGGCCTCAGTTCGTTTGTTGCTATCTCATCAGTATTCCA  790

seq1  GGAACCATCTTAACTCTAATGCCACGCACAGCTGATCAGGTCTCTTCAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCATCTTAACTCTAATGCCACGCACAGCTGATCAGGTCTCTTCAAG  840

seq1  GAGTCGCAGGAGCCCATGGCGCCTCGCTCTGCGTCCCATGATTTCTTCGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGCAGGAGCCCATGGCGCCTCGCTCTGCGTCCCATGATTTCTTCGC  890

seq1  ATCCCCCACAGCGTTAGAAAAGAAACGAATACTCTAGACTTGCCTGCTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCACAGCGTTAGAAAAGAAACGAATACTCTAGACTTGCCTGCTGA  940

seq1  AGGAAAGATCTCTGCTTCCCCCACAACTATTAATCGCTGATAGCGTCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGATCTCTGCTTCCCCCACAACTATTAATCGCTGATAGCGTCTCA  990

seq1  AGATGGGCCGGGGCTTCATGAATTC  1023
      |||||||||||||||||||||||||
seq2  AGATGGGCCGGGGCTTCATGAATTC  1015