BAC Information

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BAC

Clone NameB6Ng01-034I04
Chromosome2 (Build37)
Map Location 169,453,206 - 169,548,698
singlet/doubletdoublet
Overlap geneTshz2
Upstream geneAtp9a, Sall4, Zfp64, LOC100043909, EG668954
Downstream geneLOC100043737, LOC100043910, Zfp217, Silg111, LOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034I04.bB6Ng01-034I04.g
ACCDH863242DH863243
length6491,126
definitionDH863242|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I04, 5' end.DH863243|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(169,548,050 - 169,548,698)(169,453,206 - 169,454,345)
sequence
gaattcacaaaagtggcagctagtgaagatgggatagcagagtttctctg
tgtttttgttttctgtcactaaccggtaccgggagccctggagagcagag
tccagtccttacagaaaagcatacgggggctgtgaacaagtaccaatgac
ggaggagtcatgcatggctctctcgggccttgcatttctgatagaacagt
tctttggctgaataacattgcattcatctgatcagaaaatcagctcccat
tcagtatttcttgcaaaaccagaatttcaacaagggaagaaacacacaga
cacccctaacgttgagtgcccctctcccaggttctcagctagctgtcttt
actgaagaaataaacacagccgtgagctgtgcccagatggaggccgagaa
aatgttaggatgaaaccctaagtcactctcttctggggcaaatgagaata
agttggcttgcgttaggcgaggacgggtcgatatttcattattaacacgg
tgacaattgcatattaacaagaggtcattttccccccaagcatctaactg
ccaaacctgctggatgaatggtttccttcctccactggagcatctttctg
tttctcttctgctaatatggaaacttgagcctttagccagtgtgtgtgt
gaattctgagccccagatctcaggaagctgaatatcccagaattaaaccc
agcattgctgtaagacttgactcttgagagatgtttctcgagtgctggga
tgtatatgtgctcagtaaaatttttttttccattctggaaatgtctacaa
cacatttggttctcactctgcctgttcttgtgaccagaagcaacttcagg
aaggaaggacttctttgggcctccaacgtaagggagtggtctggtcatgg
tagagaaggcacgacagcattcatggcgtcttggtggatgaagacgcaga
gtctctggggctagacgagagaccaggccctacagtgatgctctatgtca
accccaaaggtccatgtccttcccgaacagcaccaccacctggggaccaa
ggtgaagcccatgagagtgtggggggaacattacatatttaaaccatacc
aaatatattttcatactttgcctccctctgaaccataagtcttatttctt
gttccttaaatacatgacttttttttcctttttttagacttcactaagca
tacacttcaggtaactgctgcagatccaactcagtgtctttcgatggcac
agaaggcaattcccccatttaattcagcaaatataactgctctgcgaaag
ccccgctaaacacactcttactccctgggcttcccagaatgaattctgca
ttgtcagggttaagagccagtagggacatggctctacaggtaagattctt
gttatgaagtatagaggcaggagcttttaatcaaacagaacgcagggaca
tgccagggagcatggcacccatctgtagttcttctcagaagctagaggca
gggcatcctagagaagctgactggctagcccaacccacgttggcaagctc
tgtgaagcacacattgagagagcctgcctaatgagtaaggttgagagcca
ccaggcagaccgctgatgtcacatgcaccactaacacgtgaagtggcacg
cacccgcatgcacccctgacatagaccatgagaaataataaaggattagt
gttatcagtgctgggctaggagggaacagggtgaactgcaacttctctaa
tgaaggagtctgaaagaacgcacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_169548050_169548698
seq2: B6Ng01-034I04.b_45_693 (reverse)

seq1  ACACACACACTGGCTAAAGGCTCAAGTTTCCATATTAGCAGAAGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACTGGCTAAAGGCTCAAGTTTCCATATTAGCAGAAGAGAAAC  50

seq1  AGAAAGATGCTCCAGTGGAGGAAGGAAACCATTCATCCAGCAGGTTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATGCTCCAGTGGAGGAAGGAAACCATTCATCCAGCAGGTTTGGC  100

seq1  AGTTAGATGCTTGGGGGGAAAATGACCTCTTGTTAATATGCAATTGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGATGCTTGGGGGGAAAATGACCTCTTGTTAATATGCAATTGTCAC  150

seq1  CGTGTTAATAATGAAATATCGACCCGTCCTCGCCTAACGCAAGCCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTAATAATGAAATATCGACCCGTCCTCGCCTAACGCAAGCCAACTT  200

seq1  ATTCTCATTTGCCCCAGAAGAGAGTGACTTAGGGTTTCATCCTAACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATTTGCCCCAGAAGAGAGTGACTTAGGGTTTCATCCTAACATTT  250

seq1  TCTCGGCCTCCATCTGGGCACAGCTCACGGCTGTGTTTATTTCTTCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGCCTCCATCTGGGCACAGCTCACGGCTGTGTTTATTTCTTCAGTA  300

seq1  AAGACAGCTAGCTGAGAACCTGGGAGAGGGGCACTCAACGTTAGGGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCTAGCTGAGAACCTGGGAGAGGGGCACTCAACGTTAGGGGTGT  350

seq1  CTGTGTGTTTCTTCCCTTGTTGAAATTCTGGTTTTGCAAGAAATACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTTCTTCCCTTGTTGAAATTCTGGTTTTGCAAGAAATACTGAA  400

seq1  TGGGAGCTGATTTTCTGATCAGATGAATGCAATGTTATTCAGCCAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTGATTTTCTGATCAGATGAATGCAATGTTATTCAGCCAAAGAA  450

seq1  CTGTTCTATCAGAAATGCAAGGCCCGAGAGAGCCATGCATGACTCCTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTATCAGAAATGCAAGGCCCGAGAGAGCCATGCATGACTCCTCCG  500

seq1  TCATTGGTACTTGTTCACAGCCCCCGTATGCTTTTCTGTAAGGACTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTACTTGTTCACAGCCCCCGTATGCTTTTCTGTAAGGACTGGAC  550

seq1  TCTGCTCTCCAGGGCTCCCGGTACCGGTTAGTGACAGAAAACAAAAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTCCAGGGCTCCCGGTACCGGTTAGTGACAGAAAACAAAAACAC  600

seq1  AGAGAAACTCTGCTATCCCATCTTCACTAGCTGCCACTTTTGTGAATTC  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACTCTGCTATCCCATCTTCACTAGCTGCCACTTTTGTGAATTC  649

seq1: chr2_169453206_169454345
seq2: B6Ng01-034I04.g_70_1195

seq1  GAATTCTGAGCCCCAGATCTCAGGAAGCTGAATATCCCAGAATTAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGCCCCAGATCTCAGGAAGCTGAATATCCCAGAATTAAACCC  50

seq1  AGCATTGCTGTAAGACTTGACTCTTGAGAGATGTTTCTCGAGTGCTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGCTGTAAGACTTGACTCTTGAGAGATGTTTCTCGAGTGCTGGGA  100

seq1  TGTATATGTGCTCAGTAAAATTTTTTTTTCCATTCTGGAAATGTCTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTGCTCAGTAAAATTTTTTTTTCCATTCTGGAAATGTCTACAA  150

seq1  CACATTTGGTTCTCACTCTGCCTGTTCTTGTGACCAGAAGCAACTTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGGTTCTCACTCTGCCTGTTCTTGTGACCAGAAGCAACTTCAGG  200

seq1  AAGGAAGGACTTCTTTGGGCCTCCAACGTAAGGGAGTGGTCTGGTCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGACTTCTTTGGGCCTCCAACGTAAGGGAGTGGTCTGGTCATGG  250

seq1  TAGAGAAGGCACGACAGCATTCATGGCGTCTTGGTGGATGAAGACGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGGCACGACAGCATTCATGGCGTCTTGGTGGATGAAGACGCAGA  300

seq1  GTCTCTGGGGCTAGACGAGAGACCAGGCCCTACAGTGATGCTCTATGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGGGCTAGACGAGAGACCAGGCCCTACAGTGATGCTCTATGTCA  350

seq1  ACCCCAAAGGTCCATGTCCTTCCCGAACAGCACCACCACCTGGGGACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAAGGTCCATGTCCTTCCCGAACAGCACCACCACCTGGGGACCAA  400

seq1  GGTGAAGCCCATGAGAGTGTGGGGGGAACATTACATATTTAAACCATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGCCCATGAGAGTGTGGGGGGAACATTACATATTTAAACCATACC  450

seq1  AAATATATTTTCATACTTTGCCTCCCTCTGAACCATAAGTCTTATTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTTTCATACTTTGCCTCCCTCTGAACCATAAGTCTTATTTCTT  500

seq1  GTTCCTTAAATACATGACTTTTTTTTCCTTTTTTTAGACTTCACTAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTAAATACATGACTTTTTTTTCCTTTTTTTAGACTTCACTAAGCA  550

seq1  TACACTTCAGGTAACTGCTGCAGATCCAACTCAGTGTCTTTCGATGGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTCAGGTAACTGCTGCAGATCCAACTCAGTGTCTTTCGATGGCAC  600

seq1  AGAAGGCAATTCCCCCATTTAATTCAGCAAATATAACTGCTCTGCGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAATTCCCCCATTTAATTCAGCAAATATAACTGCTCTGCGAAAG  650

seq1  CCCCGCTAAACACACTCTTACTCCCTGGGCTTCCCAGAATGAATTCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCTAAACACACTCTTACTCCCTGGGCTTCCCAGAATGAATTCTGCA  700

seq1  TTGTCAGGGTTAAGAGCCAGTAGGGACATGGCTCTACAGGTAAGATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGGGTTAAGAGCCAGTAGGGACATGGCTCTACAGGTAAGATTCTT  750

seq1  GTTATGAAGTATAGAGGCAGGAGC-TTTAATCAAACAGAACGCAGGGACA  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTATGAAGTATAGAGGCAGGAGCTTTTAATCAAACAGAACGCAGGGACA  800

seq1  TGCCAGGGAGCATGGCACCCATCTGTAGTTCTTCTCAGAAGCTAGAGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGAGCATGGCACCCATCTGTAGTTCTTCTCAGAAGCTAGAGGCA  850

seq1  GGGCATCCTAGAAGAAGCTGACTGGCTAGCCCAACCCACGTTGGCAAGCT  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCCTAG-AGAAGCTGACTGGCTAGCCCAACCCACGTTGGCAAGCT  899

seq1  CTGTGAGGCACACATTGAGAGAGCCTGCCTAAATGAGTAAGGTTGAGAGC  949
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGTGAAGCACACATTGAGAGAGCCTGCCT-AATGAGTAAGGTTGAGAGC  948

seq1  CACCAGGCAGGACCGCTGATGTCACATGCACCACAAACACGTGAAGGTGC  999
      ||||||||| |||||||||||||||||||||||| |||||||||||  ||
seq2  CACCAGGCA-GACCGCTGATGTCACATGCACCACTAACACGTGAAGTGGC  997

seq1  ACGCACCCGCATGCACCCCAGACATAGACACATGAGAAATAAATAAAAGA  1049
      ||||||||||||||||||| ||||||||| |||||||||| |||||| ||
seq2  ACGCACCCGCATGCACCCCTGACATAGAC-CATGAGAAAT-AATAAAGGA  1045

seq1  ATAGGTGTTATCAGGTGCTGGGCCTAGGAGGGACACAGTGTCAAACTGCA  1099
       || ||||||||| |||||||| |||||||||| |||| ||  |||||||
seq2  TTA-GTGTTATCA-GTGCTGGG-CTAGGAGGGA-ACAGGGT-GAACTGCA  1090

seq1  ACTTTCTCTAAATGAAGGAGGTCTGAAAGAGAACGCACTTC  1140
      || |||||| ||||||||| |||||||  ||||||||||||
seq2  AC-TTCTCT-AATGAAGGA-GTCTGAA--AGAACGCACTTC  1126