BAC Information

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BAC

Clone NameB6Ng01-034K05
Chromosome2 (Build37)
Map Location 88,247,372 - 88,340,109
singlet/doubletdoublet
Overlap geneOlfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1
Upstream geneOlfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179
Downstream geneOlfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034K05.bB6Ng01-034K05.g
ACCDH863331DH863332
length1,020956
definitionDH863331|Mus musculus domesticus DNA, BAC clone: B6Ng01-034K05, 5' end.DH863332|Mus musculus domesticus DNA, BAC clone: B6Ng01-034K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,339,081 - 88,340,109)(88,247,372 - 88,248,330)
sequence
gaattcctcagagtgtagataagagggtttagcaaaggtgtccctattgt
ataaaacacagacaccatcttgtctattggtaaagtgattagtggccgtg
tgtatataaatatgcagggaccaaaaaatatgaccaccacaataaaatga
gaagtgcacgtagacaaggcctttcgtcttccttccgcactatggtttct
cagacagtataagatgaaaatataggagataaacagtactatgaaactta
tcatacatatggcaccactattagacacaactagcaaatttatcacatag
gtatccatgcaggcaagtttcatcaagggctgcaaatcacagaaatagtg
atcaataacatttgggccacagaatggtaatcttaaggctaagaaaatct
gtgctgaagagtgaatacaagaccctatccaggcaataataactaatata
tcacagatattctggttcattatagttgtatatcttagaggcttacagat
tgctacatagcggtcaatggccatgaggataagcacgaagatctccatgc
acccaaagaagtgagctgcaaagacctgagtcatacattcattgtaggaa
ataatttttttctgtgagagggcatttcacaatcaatctaggtgctgtag
ttgtagagaagcaagcatcatcgaaagacaaatagaagaggaaaacgtac
atgggactcccaagtgtctgactcatcttaatggtcaccatgatgagaaa
gttccctattaaagtcataaggtaaagaatcaagaagactcaaatattgc
ctttctgttgttctggatcctgagtcaatcccaacaaaataaatttcagt
catactgttgtatgcatcctatcagtggctatattagataggactggctg
aaaaagtttaacctgcaaaaaaagaatgatatattgagataaatgtccaa
atgtgaaattccttggtctacctttgctgttaagtctcacttcctattga
atcctgaagatgtttaaagt
gaattcaaatctgctgggtaaatgttaagtgtaaccgggtctggcataca
catagcatatggagagactcattctgcagcatggattctgaggccttgac
catgccaaataatgggtttctccatgttaattactgaattagtgagctga
gcaagatttagtatatatttttctccttctacataatttcttccccgctt
tgctgccttgtgtgaatagggatgaagaaacatgaaaattccttcctcct
ccttctctgagctttaacttctttttttctgctgcattcagaatatttag
tatgtcctctaatattcttacatttttgtgcataggtagatgttcaattg
atgtattttggggactgtgacatctagtgtcagaaaacaaagagaagaga
gatgaaaagactgtaaaaactaaaagatgagaaatcctggtgatacatga
cttctatatatgatgcagatactgtccccattaaatctcaaatatcggtg
atagaaagagctgaataattatatccaccaccacatgtacataagagtag
actggtaggggaataaaatttggagtataaataaataaataaataaataa
ataaataaataaagatagatagatagatagatagaaaaagaggaacctta
aatggtgcagcaatactcatttatagaagaggccatgagtttgacctttg
agtcagggagaggcaatgaaaaattagagggtgaaaaaggaggatgtgaa
attatgaaaataaaatattcatgttttaaattcttaaaattttatttctt
caatataatcatgccttaaacacaatcctgttatttcttgtattgataac
atacccaggaaatttgattgtagtggggattggaacataaaatcagttgg
agagaaaatgccttcttgtcaataaaatggcttcttttgtcaagttctgt
aagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88339081_88340109
seq2: B6Ng01-034K05.b_49_1068 (reverse)

seq1  ACTTTTAAAACATTCTTCAGGGATTTCAAAGGGAAGTGAGACTTAACAGC  50
      |||||  ||||| ||||||||   |||||  |||||||||||||||||||
seq2  ACTTT--AAACA-TCTTCAGG--ATTCAATAGGAAGTGAGACTTAACAGC  45

seq1  AAAGGTAGAACCAAGGAATTTCAACATTTGGACATTTATCTCAATATATC  100
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGGTAG-ACCAAGGAATTTC-ACATTTGGACATTTATCTCAATATATC  93

seq1  ATTTCTTTTTTTTGCAGGTTAAACATTTTTCAGCCAGTCCTATCTAATAT  150
      |||   |||||||||||||||||| |||||||||||||||||||||||||
seq2  ATT--CTTTTTTTGCAGGTTAAAC-TTTTTCAGCCAGTCCTATCTAATAT  140

seq1  AGCCACTGATAGGATGCATAACAACAGTATGACTG-AATTTATTTTGTTG  199
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  AGCCACTGATAGGATGCAT-ACAACAGTATGACTGAAATTTATTTTGTTG  189

seq1  GGATTGACTCAGGATCCAGAACAACAG-AAGGCAATATTTGGAGTCTTCT  248
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  GGATTGACTCAGGATCCAGAACAACAGAAAGGCAATATTT-GAGTCTTCT  238

seq1  TGATTCTTTACCTTATGACTTTAATAGGGAACTTTCTCATCATGGTGACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTACCTTATGACTTTAATAGGGAACTTTCTCATCATGGTGACC  288

seq1  ATTAAGATGAGTCAGACACTTGGGAGTCCCATGTACGTTTTCCTCTTCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATGAGTCAGACACTTGGGAGTCCCATGTACGTTTTCCTCTTCTA  338

seq1  TTTGTCTTTCGCTGATGCTTGCTTCTCTACAACTACAGCACCTAGATTGA  398
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTCGATGATGCTTGCTTCTCTACAACTACAGCACCTAGATTGA  388

seq1  TTGTG-AATGCCCTCTCACAGAAAAAAATTATTTCCTACAATGAATGTAT  447
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAATGCCCTCTCACAGAAAAAAATTATTTCCTACAATGAATGTAT  438

seq1  GACTCAGGTCTTTGCAGCTCACTTCTTTGGGTGCATGGAGATCTTCGTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGGTCTTTGCAGCTCACTTCTTTGGGTGCATGGAGATCTTCGTGC  488

seq1  TTATCCTCATGGCCATTGACCGCTATGTAGCAATCTGTAAGCCTCTAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTCATGGCCATTGACCGCTATGTAGCAATCTGTAAGCCTCTAAGA  538

seq1  TATACAACTATAATGAACCAGAATATCTGTGATATATTAGTTATTATTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACTATAATGAACCAGAATATCTGTGATATATTAGTTATTATTGC  588

seq1  CTGGATAGGGTCTTGTATTCACTCTTCAGCACAGATTTTCTTAGCCTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAGGGTCTTGTATTCACTCTTCAGCACAGATTTTCTTAGCCTTAA  638

seq1  GATTACCATTCTGTGGCCCAAATGTTATTGATCACTATTTCTGTGATTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCATTCTGTGGCCCAAATGTTATTGATCACTATTTCTGTGATTTG  688

seq1  CAGCCCTTGATGAAACTTGCCTGCATGGATACCTATGTGATAAATTTGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTGATGAAACTTGCCTGCATGGATACCTATGTGATAAATTTGCT  738

seq1  AGTTGTGTCTAATAGTGGTGCCATATGTATGATAAGTTTCATAGTACTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTCTAATAGTGGTGCCATATGTATGATAAGTTTCATAGTACTGT  788

seq1  TTATCTCCTATATTTTCATCTTATACTGTCTGAGAAACCATAGTGCGGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCTATATTTTCATCTTATACTGTCTGAGAAACCATAGTGCGGAA  838

seq1  GGAAGACGAAAGGCCTTGTCTACGTGCACTTCTCATTTTATTGTGGTGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACGAAAGGCCTTGTCTACGTGCACTTCTCATTTTATTGTGGTGGT  888

seq1  CATATTTTTTGGTCCCTGCATATTTATATACACACGGCCACTAATCACTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTTGGTCCCTGCATATTTATATACACACGGCCACTAATCACTT  938

seq1  TACCAATAGACAAGATGGTGTCTGTGTTTTATACAATAGGGACACCTTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATAGACAAGATGGTGTCTGTGTTTTATACAATAGGGACACCTTTG  988

seq1  CTAAACCCTCTTATCTACACTCTGAGGAATTC  1029
      ||||||||||||||||||||||||||||||||
seq2  CTAAACCCTCTTATCTACACTCTGAGGAATTC  1020

seq1: chr2_88247372_88248330
seq2: B6Ng01-034K05.g_71_1026

seq1  GAATTCAAATCTGCTGGGTAAATGTTAAGTGTAACCGGGTCTGGCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTGCTGGGTAAATGTTAAGTGTAACCGGGTCTGGCATACA  50

seq1  CATAGCATATGGAGAGACTCATTCTGCAGCATGGATTCTGAGGCCTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATATGGAGAGACTCATTCTGCAGCATGGATTCTGAGGCCTTGAC  100

seq1  CATGCCAAATAATGGGTTTCTCCATGTTAATTACTGAATTAGTGAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAAATAATGGGTTTCTCCATGTTAATTACTGAATTAGTGAGCTGA  150

seq1  GCAAGATTTAGTATATATTTTTCTCCTTCTACATAATTTCTTCCCCGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATTTAGTATATATTTTTCTCCTTCTACATAATTTCTTCCCCGCTT  200

seq1  TGCTGCCTTGTGTGAATAGGGATGAAGAAACATGAAAATTCCTTCCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTTGTGTGAATAGGGATGAAGAAACATGAAAATTCCTTCCTCCT  250

seq1  CCTTCTCTGAGCTTTAACTTCTTTTTTTCTGCTGCATTCAGAATATTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGAGCTTTAACTTCTTTTTTTCTGCTGCATTCAGAATATTTAG  300

seq1  TATGTCCTCTAATATTCTTACATTTTTGTGCATAGGTAGATGTTCAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTCTAATATTCTTACATTTTTGTGCATAGGTAGATGTTCAATTG  350

seq1  ATGTATTTTGGGGACTGTGACATCTAGTGTCAGAAAACAAAGAGAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTGGGGACTGTGACATCTAGTGTCAGAAAACAAAGAGAAGAGA  400

seq1  GATGAAAAGACTGTAAAAACTAAAAGATGAGAAATCCTGGTGATACATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAAGACTGTAAAAACTAAAAGATGAGAAATCCTGGTGATACATGA  450

seq1  CTTCTATATATGATGCAGATACTGTCCCCATTAAATCTCAAATATCGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATATATGATGCAGATACTGTCCCCATTAAATCTCAAATATCGGTG  500

seq1  ATAGAAAGAGCTGAATAATTATATCCACCACCACATGTACATAAGAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGAGCTGAATAATTATATCCACCACCACATGTACATAAGAGTAG  550

seq1  ACTGGTAGGGGAATAAAATTTGGAGTATAAATAAATAAATAAATAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAGGGGAATAAAATTTGGAGTATAAATAAATAAATAAATAAATAA  600

seq1  ATAAATAAATAAAGATAGATAGATAGATAGATAGAAAAAGAGGAACCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAAGATAGATAGATAGATAGATAGAAAAAGAGGAACCTTA  650

seq1  AATGGTGCAGCAATACTCA-TTATAGAAGAGGCCATGAGTTTGACC-TTG  698
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  AATGGTGCAGCAATACTCATTTATAGAAGAGGCCATGAGTTTGACCTTTG  700

seq1  AGTCAGGGAGAGGCAATGAAAAATTAGAGGGTGAAAAAGGAGGATGTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGGAGAGGCAATGAAAAATTAGAGGGTGAAAAAGGAGGATGTGAA  750

seq1  ATTATGAAAATAAAATATTCATGTATTAAATTCTTAAAATATTTATTTCT  798
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  ATTATGAAAATAAAATATTCATGTTTTAAATTCTTAAAAT-TTTATTTCT  799

seq1  TCAATATAATCATGCCTTAAACACAAT-CTGTTATTTCTTGTATTGTATA  847
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  TCAATATAATCATGCCTTAAACACAATCCTGTTATTTCTTGTATTG-ATA  848

seq1  ACATACCCAGGAAATTTGATTGTAGTTGGTATTGAATCAATAAATCAGTT  897
      |||||||||||||||||||||||||| || |||| | ||  |||||||||
seq2  ACATACCCAGGAAATTTGATTGTAGTGGGGATTGGAACATAAAATCAGTT  898

seq1  GGAGAGAAAATGCCTTCTGTACAATAAACATGTCTTCATTTTGTCAAGTT  947
      ||||||||||||||||||   ||||||| ||| |||| |||||||||| |
seq2  GGAGAGAAAATGCCTTCTTGTCAATAAA-ATGGCTTC-TTTTGTCAAG-T  945

seq1  TCTGTAAAGTTT  959
      ||||| ||||||
seq2  TCTGT-AAGTTT  956